RNA–Protein interactions for RNA: ENST00000508180.1

NIPAL1-203, Transcript of NIPA like domain containing 1, humanhuman

TSL 5

Gene NIPAL1, Length 708 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL1-203ENST00000508180 AEBP2Q6ZN18 517 aaPredicted RBP22.37■■□□□ 1.17
NIPAL1-203ENST00000508180 CHIC1Q5VXU3 224 aa20.83■□□□□ 0.93
NIPAL1-203ENST00000508180 SENP3Q9H4L4 574 aaPredicted RBP19.15■□□□□ 0.66
NIPAL1-203ENST00000508180 PHF23Q9BUL5 403 aaPredicted RBP18.81■□□□□ 0.6
NIPAL1-203ENST00000508180 FOXD1Q16676 465 aa17.97■□□□□ 0.47
NIPAL1-203ENST00000508180 POTEDQ86YR6 584 aa17.92■□□□□ 0.46
NIPAL1-203ENST00000508180 NISCHQ9Y2I1 1504 aa17.44■□□□□ 0.38
NIPAL1-203ENST00000508180 MSH5O43196 834 aa17.05■□□□□ 0.32
NIPAL1-203ENST00000508180 PIAS4Q8N2W9 510 aaPredicted RBP16.58■□□□□ 0.24
NIPAL1-203ENST00000508180 ABCC9O60706 1549 aa16.56■□□□□ 0.24
NIPAL1-203ENST00000508180 PPP6R1Q9UPN7 881 aa16.26■□□□□ 0.19
NIPAL1-203ENST00000508180 ADRA2BP18089 450 aa16.15■□□□□ 0.18
NIPAL1-203ENST00000508180 CCDC180Q9P1Z9 1646 aa16.05■□□□□ 0.16
NIPAL1-203ENST00000508180 PLPPR3Q6T4P5 718 aa16.03■□□□□ 0.16
NIPAL1-203ENST00000508180 DNAJC5BQ9UF47 199 aa15.9■□□□□ 0.14
NIPAL1-203ENST00000508180 RB1CC1Q8TDY2 1594 aa15.54■□□□□ 0.08
NIPAL1-203ENST00000508180 UNC13AQ9UPW8 1703 aa15.25■□□□□ 0.03
NIPAL1-203ENST00000508180 NACADO15069 1562 aa15.24■□□□□ 0.03
NIPAL1-203ENST00000508180 PABPN1Q86U42 306 aaKnown RBP eCLIP15.23■□□□□ 0.03
NIPAL1-203ENST00000508180 DNAJC5Q9H3Z4 198 aa15.1■□□□□ 0.01
NIPAL1-203ENST00000508180 DMRT2Q9Y5R5 561 aa15.09■□□□□ 0.01
NIPAL1-203ENST00000508180 CACNB1Q02641 598 aaPredicted RBP15.08■□□□□ 0
NIPAL1-203ENST00000508180 MAPK8IP2Q13387 824 aaPredicted RBP15.06■□□□□ 0
NIPAL1-203ENST00000508180 BICRAQ9NZM4 1560 aa15.04■□□□□ -0
NIPAL1-203ENST00000508180 CECR2Q9BXF3 1484 aa14.98□□□□□ -0.01
NIPAL1-203ENST00000508180 CC2D2AQ9P2K1 1620 aa14.96□□□□□ -0.01
NIPAL1-203ENST00000508180 DCAF8L2P0C7V8 631 aa14.96□□□□□ -0.01
NIPAL1-203ENST00000508180 SHROOM4Q9ULL8 1493 aa14.82□□□□□ -0.04
NIPAL1-203ENST00000508180 EIF4G1Q04637 1599 aaKnown RBP14.77□□□□□ -0.05
NIPAL1-203ENST00000508180 MYO15BQ96JP2 1530 aa14.76□□□□□ -0.05
NIPAL1-203ENST00000508180 SCAF1Q9H7N4 1312 aaKnown RBP14.72□□□□□ -0.05
NIPAL1-203ENST00000508180 SCRIBQ14160 1630 aa14.58□□□□□ -0.08
NIPAL1-203ENST00000508180 CUX2O14529 1486 aa14.54□□□□□ -0.08
NIPAL1-203ENST00000508180 RNF39Q9H2S5 420 aa14.51□□□□□ -0.09
NIPAL1-203ENST00000508180 DCAF8L1A6NGE4 600 aa14.47□□□□□ -0.09
NIPAL1-203ENST00000508180 ERCC6Q03468 1493 aa14.4□□□□□ -0.1
NIPAL1-203ENST00000508180 DCAF1Q9Y4B6 1507 aa14.36□□□□□ -0.11
NIPAL1-203ENST00000508180 ZCCHC6Q5VYS8 1495 aaKnown RBP14.36□□□□□ -0.11
NIPAL1-203ENST00000508180 TRIM41Q8WV44 630 aa14.3□□□□□ -0.12
NIPAL1-203ENST00000508180 HOXD11P31277 338 aaPredicted RBP14.25□□□□□ -0.13
NIPAL1-203ENST00000508180 C1QBPQ07021 282 aaKnown RBP14.24□□□□□ -0.13
NIPAL1-203ENST00000508180 THOC2Q8NI27 1593 aaKnown RBP14.09□□□□□ -0.15
NIPAL1-203ENST00000508180 NESP48681 1621 aa14.03□□□□□ -0.16
NIPAL1-203ENST00000508180 SMARCA2P51531 1590 aa14□□□□□ -0.17
NIPAL1-203ENST00000508180 NCAPD3P42695 1498 aa13.99□□□□□ -0.17
NIPAL1-203ENST00000508180 PPP4R3CPQ6ZMV5 832 aa13.98□□□□□ -0.17
NIPAL1-203ENST00000508180 KIF21AQ7Z4S6 1674 aa13.95□□□□□ -0.18
NIPAL1-203ENST00000508180 HMGXB3Q12766 1538 aa13.94□□□□□ -0.18
NIPAL1-203ENST00000508180 RNF216Q9NWF9 866 aaPredicted RBP13.93□□□□□ -0.18
NIPAL1-203ENST00000508180 BAZ1AQ9NRL2 1556 aaPredicted RBP13.89□□□□□ -0.19
NIPAL1-203ENST00000508180 LAMC3Q9Y6N6 1575 aa13.89□□□□□ -0.19
NIPAL1-203ENST00000508180 ATAD2BQ9ULI0 1458 aa13.89□□□□□ -0.19
NIPAL1-203ENST00000508180 POTEHQ6S545 545 aa13.88□□□□□ -0.19
NIPAL1-203ENST00000508180 CNKSR2Q8WXI2 1034 aa13.86□□□□□ -0.19
NIPAL1-203ENST00000508180 SMARCA4P51532 1647 aa13.81□□□□□ -0.2
NIPAL1-203ENST00000508180 BAZ1BQ9UIG0 1483 aaKnown RBP13.8□□□□□ -0.2
NIPAL1-203ENST00000508180 PDS5BQ9NTI5 1447 aa13.77□□□□□ -0.21
NIPAL1-203ENST00000508180 MRC2Q9UBG0 1479 aa13.74□□□□□ -0.21
NIPAL1-203ENST00000508180 WDR62O43379 1518 aa13.73□□□□□ -0.21
NIPAL1-203ENST00000508180 RIMBP3CA6NJZ7 1639 aa13.71□□□□□ -0.22
NIPAL1-203ENST00000508180 RIMBP3BA6NNM3 1639 aa13.71□□□□□ -0.22
NIPAL1-203ENST00000508180 RIMBP3Q9UFD9 1639 aa13.71□□□□□ -0.22
NIPAL1-203ENST00000508180 OSCARQ8IYS5 282 aa13.67□□□□□ -0.22
NIPAL1-203ENST00000508180 PEG3Q9GZU2 1588 aa13.63□□□□□ -0.23
NIPAL1-203ENST00000508180 CEP164Q9UPV0 1460 aa13.57□□□□□ -0.24
NIPAL1-203ENST00000508180 ARHGEF11O15085 1522 aa13.57□□□□□ -0.24
NIPAL1-203ENST00000508180 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.55□□□□□ -0.24
NIPAL1-203ENST00000508180 CADPSQ9ULU8 1353 aa13.54□□□□□ -0.24
NIPAL1-203ENST00000508180 TRHP20396 242 aaPredicted RBP13.53□□□□□ -0.24
NIPAL1-203ENST00000508180 FANCD2Q9BXW9 1451 aa13.46□□□□□ -0.25
NIPAL1-203ENST00000508180 MROH2BQ7Z745 1585 aa13.43□□□□□ -0.26
NIPAL1-203ENST00000508180 CYB5RLQ6IPT4 315 aa13.41□□□□□ -0.26
NIPAL1-203ENST00000508180 ARAP1Q96P48 1450 aa13.37□□□□□ -0.27
NIPAL1-203ENST00000508180 URB2Q14146 1524 aaKnown RBP13.37□□□□□ -0.27
NIPAL1-203ENST00000508180 CHD1O14646 1710 aa13.36□□□□□ -0.27
NIPAL1-203ENST00000508180 DSG3P32926 999 aa13.34□□□□□ -0.27
NIPAL1-203ENST00000508180 NCBP3Q53F19 620 aaKnown RBP13.32□□□□□ -0.28
NIPAL1-203ENST00000508180 PRDM2Q13029 1718 aa13.31□□□□□ -0.28
NIPAL1-203ENST00000508180 KCNA4P22459 653 aa13.31□□□□□ -0.28
NIPAL1-203ENST00000508180 EIF4G3O43432 1585 aaKnown RBP13.31□□□□□ -0.28
NIPAL1-203ENST00000508180 WIZO95785 1651 aa13.31□□□□□ -0.28
NIPAL1-203ENST00000508180 ZNF608Q9ULD9 1512 aaPredicted RBP13.29□□□□□ -0.28
NIPAL1-203ENST00000508180 IFT140Q96RY7 1462 aa13.29□□□□□ -0.28
NIPAL1-203ENST00000508180 CFTRP13569 1480 aa13.28□□□□□ -0.28
NIPAL1-203ENST00000508180 RSF1Q96T23 1441 aaPredicted RBP13.26□□□□□ -0.29
NIPAL1-203ENST00000508180 SPINK5Q9NQ38 1064 aaPredicted RBP13.25□□□□□ -0.29
NIPAL1-203ENST00000508180 CAPN15O75808 1086 aa13.22□□□□□ -0.29
NIPAL1-203ENST00000508180 U3KPZ7 1027 aaPredicted RBP13.21□□□□□ -0.29
NIPAL1-203ENST00000508180 FBLN2P98095 1184 aa13.14□□□□□ -0.31
NIPAL1-203ENST00000508180 TOPBP1Q92547 1522 aa13.13□□□□□ -0.31
NIPAL1-203ENST00000508180 TOP2AP11388 1531 aaKnown RBP13.09□□□□□ -0.31
NIPAL1-203ENST00000508180 CLASP1Q7Z460 1538 aa13.09□□□□□ -0.31
NIPAL1-203ENST00000508180 SYNJ1O43426 1573 aa13.09□□□□□ -0.31
NIPAL1-203ENST00000508180 AQRO60306 1485 aaKnown RBP eCLIP13.08□□□□□ -0.32
NIPAL1-203ENST00000508180 DNMBPQ6XZF7 1577 aa13.07□□□□□ -0.32
NIPAL1-203ENST00000508180 TARBP1Q13395 1621 aaKnown RBP13.07□□□□□ -0.32
NIPAL1-203ENST00000508180 NPM3O75607 178 aaKnown RBP13.07□□□□□ -0.32
NIPAL1-203ENST00000508180 ILDR1Q86SU0 546 aaPredicted RBP13.06□□□□□ -0.32
NIPAL1-203ENST00000508180 ABCC8Q09428 1581 aa13.06□□□□□ -0.32
NIPAL1-203ENST00000508180 SNAPC4Q5SXM2 1469 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms