RNA–Protein interactions for RNA: ENST00000504020.2

CCDC110-203, Transcript of coiled-coil domain containing 110, humanhuman

TSL 5

Gene CCDC110, Length 470 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC110-203ENST00000504020 AEBP2Q6ZN18 517 aaPredicted RBP17.72■□□□□ 0.43
CCDC110-203ENST00000504020 CHIC1Q5VXU3 224 aa16.45■□□□□ 0.22
CCDC110-203ENST00000504020 SENP3Q9H4L4 574 aaPredicted RBP15.13■□□□□ 0.01
CCDC110-203ENST00000504020 PHF23Q9BUL5 403 aaPredicted RBP14.9□□□□□ -0.02
CCDC110-203ENST00000504020 POTEDQ86YR6 584 aa14.34□□□□□ -0.11
CCDC110-203ENST00000504020 FOXD1Q16676 465 aa14.24□□□□□ -0.13
CCDC110-203ENST00000504020 DNAJC5BQ9UF47 199 aa14.07□□□□□ -0.16
CCDC110-203ENST00000504020 DNAJC5Q9H3Z4 198 aa13.85□□□□□ -0.19
CCDC110-203ENST00000504020 ABCC9O60706 1549 aa13.79□□□□□ -0.2
CCDC110-203ENST00000504020 MSH5O43196 834 aa13.49□□□□□ -0.25
CCDC110-203ENST00000504020 NISCHQ9Y2I1 1504 aa13.45□□□□□ -0.26
CCDC110-203ENST00000504020 PIAS4Q8N2W9 510 aaPredicted RBP13.13□□□□□ -0.31
CCDC110-203ENST00000504020 PPP6R1Q9UPN7 881 aa12.87□□□□□ -0.35
CCDC110-203ENST00000504020 ADRA2BP18089 450 aa12.79□□□□□ -0.36
CCDC110-203ENST00000504020 CCDC180Q9P1Z9 1646 aa12.68□□□□□ -0.38
CCDC110-203ENST00000504020 TRIM41Q8WV44 630 aa12.65□□□□□ -0.38
CCDC110-203ENST00000504020 RB1CC1Q8TDY2 1594 aa12.64□□□□□ -0.39
CCDC110-203ENST00000504020 PABPN1Q86U42 306 aaKnown RBP eCLIP12.61□□□□□ -0.39
CCDC110-203ENST00000504020 PLPPR3Q6T4P5 718 aa12.58□□□□□ -0.4
CCDC110-203ENST00000504020 CECR2Q9BXF3 1484 aa12.58□□□□□ -0.4
CCDC110-203ENST00000504020 CUX2O14529 1486 aa12.46□□□□□ -0.42
CCDC110-203ENST00000504020 CC2D2AQ9P2K1 1620 aa12.45□□□□□ -0.42
CCDC110-203ENST00000504020 UNC13AQ9UPW8 1703 aa12.44□□□□□ -0.42
CCDC110-203ENST00000504020 BICRAQ9NZM4 1560 aa12.33□□□□□ -0.44
CCDC110-203ENST00000504020 NACADO15069 1562 aa12.25□□□□□ -0.45
CCDC110-203ENST00000504020 EIF4G1Q04637 1599 aaKnown RBP12.11□□□□□ -0.47
CCDC110-203ENST00000504020 ILDR1Q86SU0 546 aaPredicted RBP12.06□□□□□ -0.48
CCDC110-203ENST00000504020 SHROOM4Q9ULL8 1493 aa12.04□□□□□ -0.48
CCDC110-203ENST00000504020 CACNB1Q02641 598 aaPredicted RBP12.03□□□□□ -0.48
CCDC110-203ENST00000504020 ERCC6Q03468 1493 aa12□□□□□ -0.49
CCDC110-203ENST00000504020 MAPK8IP2Q13387 824 aaPredicted RBP11.97□□□□□ -0.49
CCDC110-203ENST00000504020 DMRT2Q9Y5R5 561 aa11.91□□□□□ -0.5
CCDC110-203ENST00000504020 DCAF8L2P0C7V8 631 aa11.78□□□□□ -0.52
CCDC110-203ENST00000504020 THOC2Q8NI27 1593 aaKnown RBP11.7□□□□□ -0.54
CCDC110-203ENST00000504020 MYO15BQ96JP2 1530 aa11.69□□□□□ -0.54
CCDC110-203ENST00000504020 TRHP20396 242 aaPredicted RBP11.68□□□□□ -0.54
CCDC110-203ENST00000504020 RIMBP3CA6NJZ7 1639 aa11.68□□□□□ -0.54
CCDC110-203ENST00000504020 RIMBP3BA6NNM3 1639 aa11.68□□□□□ -0.54
CCDC110-203ENST00000504020 RIMBP3Q9UFD9 1639 aa11.68□□□□□ -0.54
CCDC110-203ENST00000504020 OSCARQ8IYS5 282 aa11.63□□□□□ -0.55
CCDC110-203ENST00000504020 BAZ1AQ9NRL2 1556 aaPredicted RBP11.62□□□□□ -0.55
CCDC110-203ENST00000504020 SCAF1Q9H7N4 1312 aaKnown RBP11.59□□□□□ -0.55
CCDC110-203ENST00000504020 DCAF8L1A6NGE4 600 aa11.52□□□□□ -0.57
CCDC110-203ENST00000504020 NESP48681 1621 aa11.51□□□□□ -0.57
CCDC110-203ENST00000504020 RNF39Q9H2S5 420 aa11.5□□□□□ -0.57
CCDC110-203ENST00000504020 ARHGEF11O15085 1522 aa11.48□□□□□ -0.57
CCDC110-203ENST00000504020 SCRIBQ14160 1630 aa11.46□□□□□ -0.57
CCDC110-203ENST00000504020 SMARCA2P51531 1590 aa11.42□□□□□ -0.58
CCDC110-203ENST00000504020 CYB5RLQ6IPT4 315 aa11.42□□□□□ -0.58
CCDC110-203ENST00000504020 KIF21AQ7Z4S6 1674 aa11.39□□□□□ -0.59
CCDC110-203ENST00000504020 SOCS7O14512 581 aa11.35□□□□□ -0.59
CCDC110-203ENST00000504020 LMTK3Q96Q04 1460 aa11.35□□□□□ -0.59
CCDC110-203ENST00000504020 NCAPD3P42695 1498 aa11.31□□□□□ -0.6
CCDC110-203ENST00000504020 ARAP1Q96P48 1450 aa11.27□□□□□ -0.6
CCDC110-203ENST00000504020 LAMC3Q9Y6N6 1575 aa11.27□□□□□ -0.61
CCDC110-203ENST00000504020 C1QBPQ07021 282 aaKnown RBP11.26□□□□□ -0.61
CCDC110-203ENST00000504020 FBXO41Q8TF61 875 aa11.26□□□□□ -0.61
CCDC110-203ENST00000504020 WDR62O43379 1518 aa11.23□□□□□ -0.61
CCDC110-203ENST00000504020 HOXD11P31277 338 aaPredicted RBP11.21□□□□□ -0.61
CCDC110-203ENST00000504020 ERCC6L2Q5T890 1561 aa11.2□□□□□ -0.62
CCDC110-203ENST00000504020 PDS5BQ9NTI5 1447 aa11.2□□□□□ -0.62
CCDC110-203ENST00000504020 MRC2Q9UBG0 1479 aa11.19□□□□□ -0.62
CCDC110-203ENST00000504020 ILDR2Q71H61 639 aa11.18□□□□□ -0.62
CCDC110-203ENST00000504020 KDM4FA0A1W2PPD8 638 aa11.15□□□□□ -0.62
CCDC110-203ENST00000504020 HMGXB3Q12766 1538 aa11.13□□□□□ -0.63
CCDC110-203ENST00000504020 POTEHQ6S545 545 aa11.1□□□□□ -0.63
CCDC110-203ENST00000504020 ATAD2BQ9ULI0 1458 aa11.07□□□□□ -0.64
CCDC110-203ENST00000504020 DCAF1Q9Y4B6 1507 aa11.07□□□□□ -0.64
CCDC110-203ENST00000504020 HECW2Q9P2P5 1572 aa11.04□□□□□ -0.64
CCDC110-203ENST00000504020 RSF1Q96T23 1441 aaPredicted RBP11.03□□□□□ -0.64
CCDC110-203ENST00000504020 DISP3Q9P2K9 1392 aa11□□□□□ -0.65
CCDC110-203ENST00000504020 PPP4R3CPQ6ZMV5 832 aa10.98□□□□□ -0.65
CCDC110-203ENST00000504020 RNF216Q9NWF9 866 aaPredicted RBP10.95□□□□□ -0.66
CCDC110-203ENST00000504020 CHD1O14646 1710 aa10.92□□□□□ -0.66
CCDC110-203ENST00000504020 BAZ1BQ9UIG0 1483 aaKnown RBP10.89□□□□□ -0.67
CCDC110-203ENST00000504020 CEP164Q9UPV0 1460 aa10.88□□□□□ -0.67
CCDC110-203ENST00000504020 CNKSR2Q8WXI2 1034 aa10.88□□□□□ -0.67
CCDC110-203ENST00000504020 KIF13AQ9H1H9 1805 aa10.88□□□□□ -0.67
CCDC110-203ENST00000504020 CADPSQ9ULU8 1353 aa10.88□□□□□ -0.67
CCDC110-203ENST00000504020 SMARCA4P51532 1647 aa10.87□□□□□ -0.67
CCDC110-203ENST00000504020 SYNJ2O15056 1496 aa10.87□□□□□ -0.67
CCDC110-203ENST00000504020 ZCCHC6Q5VYS8 1495 aaKnown RBP10.87□□□□□ -0.67
CCDC110-203ENST00000504020 ZNF608Q9ULD9 1512 aaPredicted RBP10.82□□□□□ -0.68
CCDC110-203ENST00000504020 SPATA31D1Q6ZQQ2 1576 aa10.79□□□□□ -0.68
CCDC110-203ENST00000504020 ADGRL1O94910 1474 aa10.76□□□□□ -0.69
CCDC110-203ENST00000504020 URB2Q14146 1524 aaKnown RBP10.76□□□□□ -0.69
CCDC110-203ENST00000504020 FANCD2Q9BXW9 1451 aa10.75□□□□□ -0.69
CCDC110-203ENST00000504020 CLASP1Q7Z460 1538 aa10.74□□□□□ -0.69
CCDC110-203ENST00000504020 KDM6BO15054 1643 aa10.73□□□□□ -0.69
CCDC110-203ENST00000504020 EIF4G3O43432 1585 aaKnown RBP10.73□□□□□ -0.69
CCDC110-203ENST00000504020 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.72□□□□□ -0.69
CCDC110-203ENST00000504020 IFT140Q96RY7 1462 aa10.72□□□□□ -0.69
CCDC110-203ENST00000504020 PEG3Q9GZU2 1588 aa10.71□□□□□ -0.69
CCDC110-203ENST00000504020 GAPVD1Q14C86 1478 aa10.69□□□□□ -0.7
CCDC110-203ENST00000504020 FBLN2P98095 1184 aa10.69□□□□□ -0.7
CCDC110-203ENST00000504020 SYNJ1O43426 1573 aa10.6□□□□□ -0.71
CCDC110-203ENST00000504020 DSG3P32926 999 aa10.57□□□□□ -0.72
CCDC110-203ENST00000504020 AQRO60306 1485 aaKnown RBP eCLIP10.55□□□□□ -0.72
CCDC110-203ENST00000504020 FAM69CQ0P6D2 419 aa10.55□□□□□ -0.72
CCDC110-203ENST00000504020 ABCC10Q5T3U5 1492 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms