RNA–Protein interactions for RNA: ENST00000502996.5

SEMA6A-203, Transcript of semaphorin 6A, humanhuman

TSL 3

Gene SEMA6A, Length 710 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6A-203ENST00000502996 AEBP2Q6ZN18 517 aaPredicted RBP23.08■■□□□ 1.29
SEMA6A-203ENST00000502996 CHIC1Q5VXU3 224 aa22.75■■□□□ 1.23
SEMA6A-203ENST00000502996 NISCHQ9Y2I1 1504 aa20.43■□□□□ 0.86
SEMA6A-203ENST00000502996 PHF23Q9BUL5 403 aaPredicted RBP19.95■□□□□ 0.78
SEMA6A-203ENST00000502996 SENP3Q9H4L4 574 aaPredicted RBP19.7■□□□□ 0.74
SEMA6A-203ENST00000502996 PLPPR3Q6T4P5 718 aa18.58■□□□□ 0.56
SEMA6A-203ENST00000502996 CCDC180Q9P1Z9 1646 aa18.25■□□□□ 0.51
SEMA6A-203ENST00000502996 FOXD1Q16676 465 aa18.17■□□□□ 0.5
SEMA6A-203ENST00000502996 ABCC9O60706 1549 aa17.64■□□□□ 0.41
SEMA6A-203ENST00000502996 ADRA2BP18089 450 aa17.55■□□□□ 0.4
SEMA6A-203ENST00000502996 PPP6R1Q9UPN7 881 aa17.54■□□□□ 0.4
SEMA6A-203ENST00000502996 PIAS4Q8N2W9 510 aaPredicted RBP17.22■□□□□ 0.35
SEMA6A-203ENST00000502996 RB1CC1Q8TDY2 1594 aa17.07■□□□□ 0.32
SEMA6A-203ENST00000502996 ZCCHC6Q5VYS8 1495 aaKnown RBP17.05■□□□□ 0.32
SEMA6A-203ENST00000502996 NACADO15069 1562 aa17.05■□□□□ 0.32
SEMA6A-203ENST00000502996 DCAF8L2P0C7V8 631 aa16.98■□□□□ 0.31
SEMA6A-203ENST00000502996 MYO15BQ96JP2 1530 aa16.95■□□□□ 0.3
SEMA6A-203ENST00000502996 DCAF1Q9Y4B6 1507 aa16.92■□□□□ 0.3
SEMA6A-203ENST00000502996 MSH5O43196 834 aa16.82■□□□□ 0.28
SEMA6A-203ENST00000502996 UNC13AQ9UPW8 1703 aa16.8■□□□□ 0.28
SEMA6A-203ENST00000502996 SCRIBQ14160 1630 aa16.61■□□□□ 0.25
SEMA6A-203ENST00000502996 BICRAQ9NZM4 1560 aa16.51■□□□□ 0.23
SEMA6A-203ENST00000502996 PABPN1Q86U42 306 aaKnown RBP eCLIP16.43■□□□□ 0.22
SEMA6A-203ENST00000502996 SHROOM4Q9ULL8 1493 aa16.35■□□□□ 0.21
SEMA6A-203ENST00000502996 PPP4R3CPQ6ZMV5 832 aa16.34■□□□□ 0.21
SEMA6A-203ENST00000502996 SCAF1Q9H7N4 1312 aaKnown RBP16.2■□□□□ 0.18
SEMA6A-203ENST00000502996 EIF4G1Q04637 1599 aaKnown RBP16.08■□□□□ 0.16
SEMA6A-203ENST00000502996 KCNA4P22459 653 aa16.06■□□□□ 0.16
SEMA6A-203ENST00000502996 NCBP3Q53F19 620 aaKnown RBP16.03■□□□□ 0.16
SEMA6A-203ENST00000502996 CC2D2AQ9P2K1 1620 aa16.01■□□□□ 0.15
SEMA6A-203ENST00000502996 DNAJC5BQ9UF47 199 aa15.98■□□□□ 0.15
SEMA6A-203ENST00000502996 SMARCA4P51532 1647 aa15.9■□□□□ 0.14
SEMA6A-203ENST00000502996 CNKSR2Q8WXI2 1034 aa15.89■□□□□ 0.13
SEMA6A-203ENST00000502996 CECR2Q9BXF3 1484 aa15.88■□□□□ 0.13
SEMA6A-203ENST00000502996 BAZ1AQ9NRL2 1556 aaPredicted RBP15.87■□□□□ 0.13
SEMA6A-203ENST00000502996 MAPK8IP2Q13387 824 aaPredicted RBP15.86■□□□□ 0.13
SEMA6A-203ENST00000502996 SMARCA2P51531 1590 aa15.75■□□□□ 0.11
SEMA6A-203ENST00000502996 MROH2BQ7Z745 1585 aa15.75■□□□□ 0.11
SEMA6A-203ENST00000502996 DMRT2Q9Y5R5 561 aa15.71■□□□□ 0.11
SEMA6A-203ENST00000502996 ATAD2BQ9ULI0 1458 aa15.71■□□□□ 0.1
SEMA6A-203ENST00000502996 PEG3Q9GZU2 1588 aa15.7■□□□□ 0.1
SEMA6A-203ENST00000502996 NPM3O75607 178 aaKnown RBP15.7■□□□□ 0.1
SEMA6A-203ENST00000502996 HMGXB3Q12766 1538 aa15.68■□□□□ 0.1
SEMA6A-203ENST00000502996 NCAPD3P42695 1498 aa15.66■□□□□ 0.1
SEMA6A-203ENST00000502996 WIZO95785 1651 aa15.65■□□□□ 0.1
SEMA6A-203ENST00000502996 BAZ1BQ9UIG0 1483 aaKnown RBP15.63■□□□□ 0.09
SEMA6A-203ENST00000502996 RSF1Q96T23 1441 aaPredicted RBP15.57■□□□□ 0.08
SEMA6A-203ENST00000502996 RNF216Q9NWF9 866 aaPredicted RBP15.55■□□□□ 0.08
SEMA6A-203ENST00000502996 TOP2AP11388 1531 aaKnown RBP15.47■□□□□ 0.07
SEMA6A-203ENST00000502996 HOXD11P31277 338 aaPredicted RBP15.44■□□□□ 0.06
SEMA6A-203ENST00000502996 SLC4A1APQ9BWU0 796 aaKnown RBP15.37■□□□□ 0.05
SEMA6A-203ENST00000502996 LAMC3Q9Y6N6 1575 aa15.32■□□□□ 0.04
SEMA6A-203ENST00000502996 NESP48681 1621 aa15.28■□□□□ 0.04
SEMA6A-203ENST00000502996 PRDM2Q13029 1718 aa15.28■□□□□ 0.04
SEMA6A-203ENST00000502996 SUPT5HO00267 1087 aaKnown RBP15.26■□□□□ 0.03
SEMA6A-203ENST00000502996 KIF21AQ7Z4S6 1674 aa15.23■□□□□ 0.03
SEMA6A-203ENST00000502996 CCDC88BA6NC98 1476 aa15.23■□□□□ 0.03
SEMA6A-203ENST00000502996 ERCC6Q03468 1493 aa15.22■□□□□ 0.03
SEMA6A-203ENST00000502996 CADPSQ9ULU8 1353 aa15.21■□□□□ 0.02
SEMA6A-203ENST00000502996 PDS5BQ9NTI5 1447 aa15.16■□□□□ 0.02
SEMA6A-203ENST00000502996 CFTRP13569 1480 aa15.15■□□□□ 0.02
SEMA6A-203ENST00000502996 THOC2Q8NI27 1593 aaKnown RBP15.11■□□□□ 0.01
SEMA6A-203ENST00000502996 FANCD2Q9BXW9 1451 aa15.08■□□□□ 0
SEMA6A-203ENST00000502996 CEP164Q9UPV0 1460 aa15.08■□□□□ 0
SEMA6A-203ENST00000502996 EHMT2Q96KQ7 1210 aa15.03■□□□□ -0
SEMA6A-203ENST00000502996 MRC2Q9UBG0 1479 aa15.01□□□□□ -0.01
SEMA6A-203ENST00000502996 DCAF8L1A6NGE4 600 aa15.01□□□□□ -0.01
SEMA6A-203ENST00000502996 CUX2O14529 1486 aa15.01□□□□□ -0.01
SEMA6A-203ENST00000502996 POTEDQ86YR6 584 aa15□□□□□ -0.01
SEMA6A-203ENST00000502996 WDR62O43379 1518 aa14.97□□□□□ -0.01
SEMA6A-203ENST00000502996 URB2Q14146 1524 aaKnown RBP14.92□□□□□ -0.02
SEMA6A-203ENST00000502996 DNMBPQ6XZF7 1577 aa14.89□□□□□ -0.03
SEMA6A-203ENST00000502996 TOPBP1Q92547 1522 aa14.87□□□□□ -0.03
SEMA6A-203ENST00000502996 ABCC8Q09428 1581 aa14.86□□□□□ -0.03
SEMA6A-203ENST00000502996 FOXD4L1Q9NU39 408 aa14.82□□□□□ -0.04
SEMA6A-203ENST00000502996 CSRNP3Q8WYN3 585 aa14.8□□□□□ -0.04
SEMA6A-203ENST00000502996 CUX1P39880 1505 aa14.78□□□□□ -0.04
SEMA6A-203ENST00000502996 SLC4A2P04920 1241 aa14.77□□□□□ -0.05
SEMA6A-203ENST00000502996 BIVM-ERCC5R4GMW8 1640 aa14.75□□□□□ -0.05
SEMA6A-203ENST00000502996 ZBTB22O15209 634 aa14.75□□□□□ -0.05
SEMA6A-203ENST00000502996 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.73□□□□□ -0.05
SEMA6A-203ENST00000502996 POLA1P09884 1462 aaPredicted RBP14.73□□□□□ -0.05
SEMA6A-203ENST00000502996 IFT140Q96RY7 1462 aa14.73□□□□□ -0.05
SEMA6A-203ENST00000502996 TOP2BQ02880 1626 aa14.73□□□□□ -0.05
SEMA6A-203ENST00000502996 FGD5Q6ZNL6 1462 aa14.72□□□□□ -0.05
SEMA6A-203ENST00000502996 WRNQ14191 1432 aaPredicted RBP eCLIP14.72□□□□□ -0.05
SEMA6A-203ENST00000502996 SYNJ1O43426 1573 aa14.72□□□□□ -0.05
SEMA6A-203ENST00000502996 TARBP1Q13395 1621 aaKnown RBP14.71□□□□□ -0.05
SEMA6A-203ENST00000502996 WDR97A6NE52 1622 aa14.69□□□□□ -0.06
SEMA6A-203ENST00000502996 EIF4G3O43432 1585 aaKnown RBP14.67□□□□□ -0.06
SEMA6A-203ENST00000502996 SOGA1O94964 1423 aa14.65□□□□□ -0.06
SEMA6A-203ENST00000502996 RAD54L2Q9Y4B4 1467 aa14.64□□□□□ -0.07
SEMA6A-203ENST00000502996 ZNF608Q9ULD9 1512 aaPredicted RBP14.63□□□□□ -0.07
SEMA6A-203ENST00000502996 PBRM1Q86U86 1689 aa14.6□□□□□ -0.07
SEMA6A-203ENST00000502996 ABCA10Q8WWZ4 1543 aa14.57□□□□□ -0.08
SEMA6A-203ENST00000502996 MYCNP04198 464 aaPredicted RBP14.57□□□□□ -0.08
SEMA6A-203ENST00000502996 ABCA5Q8WWZ7 1642 aa14.56□□□□□ -0.08
SEMA6A-203ENST00000502996 AQRO60306 1485 aaKnown RBP eCLIP14.56□□□□□ -0.08
SEMA6A-203ENST00000502996 TDRD9Q8NDG6 1382 aaKnown RBP14.54□□□□□ -0.08
SEMA6A-203ENST00000502996 CHD1O14646 1710 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms