RNA–Protein interactions for RNA: ENST00000498594.5

CRAMP1-208, Transcript of cramped chromatin regulator homolog 1, humanhuman

TSL 4

Gene CRAMP1, Length 559 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1-208ENST00000498594 NISCHQ9Y2I1 1504 aa8.42□□□□□ -1.06
CRAMP1-208ENST00000498594 CHIC1Q5VXU3 224 aa8.24□□□□□ -1.09
CRAMP1-208ENST00000498594 AEBP2Q6ZN18 517 aaPredicted RBP7.91□□□□□ -1.14
CRAMP1-208ENST00000498594 ABCC9O60706 1549 aa7.79□□□□□ -1.16
CRAMP1-208ENST00000498594 CCDC180Q9P1Z9 1646 aa7.66□□□□□ -1.18
CRAMP1-208ENST00000498594 DNAJC5BQ9UF47 199 aa7.45□□□□□ -1.22
CRAMP1-208ENST00000498594 UNC13AQ9UPW8 1703 aa7.35□□□□□ -1.23
CRAMP1-208ENST00000498594 RB1CC1Q8TDY2 1594 aa7.32□□□□□ -1.24
CRAMP1-208ENST00000498594 PABPN1Q86U42 306 aaKnown RBP eCLIP7.23□□□□□ -1.25
CRAMP1-208ENST00000498594 NACADO15069 1562 aa7.21□□□□□ -1.25
CRAMP1-208ENST00000498594 DCAF8L2P0C7V8 631 aa7.21□□□□□ -1.26
CRAMP1-208ENST00000498594 PHF23Q9BUL5 403 aaPredicted RBP7.21□□□□□ -1.26
CRAMP1-208ENST00000498594 BICRAQ9NZM4 1560 aa7.16□□□□□ -1.26
CRAMP1-208ENST00000498594 CC2D2AQ9P2K1 1620 aa7.05□□□□□ -1.28
CRAMP1-208ENST00000498594 SCRIBQ14160 1630 aa7.01□□□□□ -1.29
CRAMP1-208ENST00000498594 MYO15BQ96JP2 1530 aa7.01□□□□□ -1.29
CRAMP1-208ENST00000498594 CECR2Q9BXF3 1484 aa6.99□□□□□ -1.29
CRAMP1-208ENST00000498594 EIF4G1Q04637 1599 aaKnown RBP6.97□□□□□ -1.29
CRAMP1-208ENST00000498594 PLPPR3Q6T4P5 718 aa6.93□□□□□ -1.3
CRAMP1-208ENST00000498594 ZCCHC6Q5VYS8 1495 aaKnown RBP6.92□□□□□ -1.3
CRAMP1-208ENST00000498594 SHROOM4Q9ULL8 1493 aa6.9□□□□□ -1.31
CRAMP1-208ENST00000498594 DCAF1Q9Y4B6 1507 aa6.89□□□□□ -1.31
CRAMP1-208ENST00000498594 DNAJC5Q9H3Z4 198 aa6.88□□□□□ -1.31
CRAMP1-208ENST00000498594 MYT1Q01538 1121 aa6.81□□□□□ -1.32
CRAMP1-208ENST00000498594 PELP1Q8IZL8 1130 aaKnown RBP6.81□□□□□ -1.32
CRAMP1-208ENST00000498594 SENP3Q9H4L4 574 aaPredicted RBP6.81□□□□□ -1.32
CRAMP1-208ENST00000498594 ERCC6Q03468 1493 aa6.7□□□□□ -1.34
CRAMP1-208ENST00000498594 CUX2O14529 1486 aa6.69□□□□□ -1.34
CRAMP1-208ENST00000498594 NESP48681 1621 aa6.68□□□□□ -1.34
CRAMP1-208ENST00000498594 KIF21AQ7Z4S6 1674 aa6.66□□□□□ -1.34
CRAMP1-208ENST00000498594 SMARCA4P51532 1647 aa6.64□□□□□ -1.35
CRAMP1-208ENST00000498594 NCAPD3P42695 1498 aa6.63□□□□□ -1.35
CRAMP1-208ENST00000498594 THOC2Q8NI27 1593 aaKnown RBP6.63□□□□□ -1.35
CRAMP1-208ENST00000498594 ATAD2BQ9ULI0 1458 aa6.62□□□□□ -1.35
CRAMP1-208ENST00000498594 TTBK1Q5TCY1 1321 aaPredicted RBP6.61□□□□□ -1.35
CRAMP1-208ENST00000498594 SMARCA2P51531 1590 aa6.6□□□□□ -1.35
CRAMP1-208ENST00000498594 HMGXB3Q12766 1538 aa6.59□□□□□ -1.35
CRAMP1-208ENST00000498594 POTEDQ86YR6 584 aa6.58□□□□□ -1.36
CRAMP1-208ENST00000498594 TRIM41Q8WV44 630 aa6.58□□□□□ -1.36
CRAMP1-208ENST00000498594 BAZ1BQ9UIG0 1483 aaKnown RBP6.56□□□□□ -1.36
CRAMP1-208ENST00000498594 LAMC3Q9Y6N6 1575 aa6.55□□□□□ -1.36
CRAMP1-208ENST00000498594 BAZ1AQ9NRL2 1556 aaPredicted RBP6.52□□□□□ -1.36
CRAMP1-208ENST00000498594 MROH2BQ7Z745 1585 aa6.52□□□□□ -1.37
CRAMP1-208ENST00000498594 PEG3Q9GZU2 1588 aa6.52□□□□□ -1.37
CRAMP1-208ENST00000498594 WIZO95785 1651 aa6.5□□□□□ -1.37
CRAMP1-208ENST00000498594 EHMT2Q96KQ7 1210 aa6.48□□□□□ -1.37
CRAMP1-208ENST00000498594 PDS5BQ9NTI5 1447 aa6.47□□□□□ -1.37
CRAMP1-208ENST00000498594 WDR62O43379 1518 aa6.45□□□□□ -1.38
CRAMP1-208ENST00000498594 MRC2Q9UBG0 1479 aa6.45□□□□□ -1.38
CRAMP1-208ENST00000498594 PRDM2Q13029 1718 aa6.43□□□□□ -1.38
CRAMP1-208ENST00000498594 CADPSQ9ULU8 1353 aa6.43□□□□□ -1.38
CRAMP1-208ENST00000498594 RIMBP3CA6NJZ7 1639 aa6.41□□□□□ -1.38
CRAMP1-208ENST00000498594 RIMBP3BA6NNM3 1639 aa6.41□□□□□ -1.38
CRAMP1-208ENST00000498594 RIMBP3Q9UFD9 1639 aa6.41□□□□□ -1.38
CRAMP1-208ENST00000498594 KCNA4P22459 653 aa6.41□□□□□ -1.38
CRAMP1-208ENST00000498594 CEP164Q9UPV0 1460 aa6.41□□□□□ -1.38
CRAMP1-208ENST00000498594 FANCD2Q9BXW9 1451 aa6.39□□□□□ -1.39
CRAMP1-208ENST00000498594 OSCARQ8IYS5 282 aa6.38□□□□□ -1.39
CRAMP1-208ENST00000498594 URB2Q14146 1524 aaKnown RBP6.38□□□□□ -1.39
CRAMP1-208ENST00000498594 CHD1O14646 1710 aa6.37□□□□□ -1.39
CRAMP1-208ENST00000498594 CFTRP13569 1480 aa6.34□□□□□ -1.4
CRAMP1-208ENST00000498594 ZNF608Q9ULD9 1512 aaPredicted RBP6.33□□□□□ -1.4
CRAMP1-208ENST00000498594 ARHGEF11O15085 1522 aa6.31□□□□□ -1.4
CRAMP1-208ENST00000498594 TOP2AP11388 1531 aaKnown RBP6.31□□□□□ -1.4
CRAMP1-208ENST00000498594 ADRA2BP18089 450 aa6.31□□□□□ -1.4
CRAMP1-208ENST00000498594 FOXD1Q16676 465 aa6.31□□□□□ -1.4
CRAMP1-208ENST00000498594 EIF4G3O43432 1585 aaKnown RBP6.31□□□□□ -1.4
CRAMP1-208ENST00000498594 RSF1Q96T23 1441 aaPredicted RBP6.29□□□□□ -1.4
CRAMP1-208ENST00000498594 CYB5RLQ6IPT4 315 aa6.28□□□□□ -1.4
CRAMP1-208ENST00000498594 TOPBP1Q92547 1522 aa6.26□□□□□ -1.41
CRAMP1-208ENST00000498594 TARBP1Q13395 1621 aaKnown RBP6.26□□□□□ -1.41
CRAMP1-208ENST00000498594 TRHP20396 242 aaPredicted RBP6.26□□□□□ -1.41
CRAMP1-208ENST00000498594 CCDC88BA6NC98 1476 aa6.26□□□□□ -1.41
CRAMP1-208ENST00000498594 IFT140Q96RY7 1462 aa6.26□□□□□ -1.41
CRAMP1-208ENST00000498594 ARAP1Q96P48 1450 aa6.25□□□□□ -1.41
CRAMP1-208ENST00000498594 AQRO60306 1485 aaKnown RBP eCLIP6.24□□□□□ -1.41
CRAMP1-208ENST00000498594 SLC4A1APQ9BWU0 796 aaKnown RBP6.24□□□□□ -1.41
CRAMP1-208ENST00000498594 DNMBPQ6XZF7 1577 aa6.23□□□□□ -1.41
CRAMP1-208ENST00000498594 FBLN2P98095 1184 aa6.23□□□□□ -1.41
CRAMP1-208ENST00000498594 CSRNP3Q8WYN3 585 aa6.23□□□□□ -1.41
CRAMP1-208ENST00000498594 RAD54L2Q9Y4B4 1467 aa6.2□□□□□ -1.42
CRAMP1-208ENST00000498594 PBRM1Q86U86 1689 aa6.2□□□□□ -1.42
CRAMP1-208ENST00000498594 ERICH6Q7L0X2 663 aa6.19□□□□□ -1.42
CRAMP1-208ENST00000498594 PPP6R1Q9UPN7 881 aa6.19□□□□□ -1.42
CRAMP1-208ENST00000498594 POLA1P09884 1462 aaPredicted RBP6.19□□□□□ -1.42
CRAMP1-208ENST00000498594 ABCC8Q09428 1581 aa6.18□□□□□ -1.42
CRAMP1-208ENST00000498594 CLASP1Q7Z460 1538 aa6.18□□□□□ -1.42
CRAMP1-208ENST00000498594 WDR97A6NE52 1622 aa6.17□□□□□ -1.42
CRAMP1-208ENST00000498594 TDRD9Q8NDG6 1382 aaKnown RBP6.17□□□□□ -1.42
CRAMP1-208ENST00000498594 SNAPC4Q5SXM2 1469 aa6.16□□□□□ -1.42
CRAMP1-208ENST00000498594 NCBP3Q53F19 620 aaKnown RBP6.16□□□□□ -1.42
CRAMP1-208ENST00000498594 KIF13AQ9H1H9 1805 aa6.15□□□□□ -1.42
CRAMP1-208ENST00000498594 SOGA1O94964 1423 aa6.15□□□□□ -1.43
CRAMP1-208ENST00000498594 SYNJ1O43426 1573 aa6.14□□□□□ -1.43
CRAMP1-208ENST00000498594 FGD5Q6ZNL6 1462 aa6.14□□□□□ -1.43
CRAMP1-208ENST00000498594 ERCC6L2Q5T890 1561 aa6.14□□□□□ -1.43
CRAMP1-208ENST00000498594 SLC24A1O60721 1099 aa6.13□□□□□ -1.43
CRAMP1-208ENST00000498594 CUX1P39880 1505 aa6.13□□□□□ -1.43
CRAMP1-208ENST00000498594 CHMP7Q8WUX9 453 aaPredicted RBP6.12□□□□□ -1.43
CRAMP1-208ENST00000498594 TSPOAP1O95153 1857 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 107.3 ms