RNA–Protein interactions for RNA: ENST00000497682.1

H3F3AP3-201, Transcript of H3 histone family member 3A pseudogene 3, humanhuman

BASIC

Gene H3F3AP3, Length 407 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP3-201ENST00000497682 AEBP2Q6ZN18 517 aaPredicted RBP18.9■□□□□ 0.62
H3F3AP3-201ENST00000497682 CHIC1Q5VXU3 224 aa18.18■□□□□ 0.5
H3F3AP3-201ENST00000497682 SENP3Q9H4L4 574 aaPredicted RBP16.3■□□□□ 0.2
H3F3AP3-201ENST00000497682 PHF23Q9BUL5 403 aaPredicted RBP16■□□□□ 0.15
H3F3AP3-201ENST00000497682 NISCHQ9Y2I1 1504 aa15.78■□□□□ 0.12
H3F3AP3-201ENST00000497682 FOXD1Q16676 465 aa15.04■□□□□ -0
H3F3AP3-201ENST00000497682 PLPPR3Q6T4P5 718 aa14.64□□□□□ -0.07
H3F3AP3-201ENST00000497682 MSH5O43196 834 aa14.19□□□□□ -0.14
H3F3AP3-201ENST00000497682 PIAS4Q8N2W9 510 aaPredicted RBP14.14□□□□□ -0.15
H3F3AP3-201ENST00000497682 PPP6R1Q9UPN7 881 aa14.08□□□□□ -0.16
H3F3AP3-201ENST00000497682 ADRA2BP18089 450 aa14.07□□□□□ -0.16
H3F3AP3-201ENST00000497682 CCDC180Q9P1Z9 1646 aa14.07□□□□□ -0.16
H3F3AP3-201ENST00000497682 POTEDQ86YR6 584 aa13.71□□□□□ -0.21
H3F3AP3-201ENST00000497682 ABCC9O60706 1549 aa13.46□□□□□ -0.25
H3F3AP3-201ENST00000497682 ZCCHC6Q5VYS8 1495 aaKnown RBP13.2□□□□□ -0.3
H3F3AP3-201ENST00000497682 MYO15BQ96JP2 1530 aa13.16□□□□□ -0.3
H3F3AP3-201ENST00000497682 NACADO15069 1562 aa13.14□□□□□ -0.31
H3F3AP3-201ENST00000497682 DCAF1Q9Y4B6 1507 aa13.13□□□□□ -0.31
H3F3AP3-201ENST00000497682 RB1CC1Q8TDY2 1594 aa13.11□□□□□ -0.31
H3F3AP3-201ENST00000497682 SCAF1Q9H7N4 1312 aaKnown RBP13.1□□□□□ -0.31
H3F3AP3-201ENST00000497682 DCAF8L2P0C7V8 631 aa12.9□□□□□ -0.34
H3F3AP3-201ENST00000497682 DMRT2Q9Y5R5 561 aa12.89□□□□□ -0.35
H3F3AP3-201ENST00000497682 UNC13AQ9UPW8 1703 aa12.88□□□□□ -0.35
H3F3AP3-201ENST00000497682 MAPK8IP2Q13387 824 aaPredicted RBP12.85□□□□□ -0.35
H3F3AP3-201ENST00000497682 PPP4R3CPQ6ZMV5 832 aa12.78□□□□□ -0.36
H3F3AP3-201ENST00000497682 SCRIBQ14160 1630 aa12.73□□□□□ -0.37
H3F3AP3-201ENST00000497682 BICRAQ9NZM4 1560 aa12.71□□□□□ -0.37
H3F3AP3-201ENST00000497682 SHROOM4Q9ULL8 1493 aa12.66□□□□□ -0.38
H3F3AP3-201ENST00000497682 CNKSR2Q8WXI2 1034 aa12.57□□□□□ -0.4
H3F3AP3-201ENST00000497682 PABPN1Q86U42 306 aaKnown RBP eCLIP12.53□□□□□ -0.4
H3F3AP3-201ENST00000497682 HOXD11P31277 338 aaPredicted RBP12.47□□□□□ -0.41
H3F3AP3-201ENST00000497682 NCBP3Q53F19 620 aaKnown RBP12.45□□□□□ -0.42
H3F3AP3-201ENST00000497682 RNF216Q9NWF9 866 aaPredicted RBP12.42□□□□□ -0.42
H3F3AP3-201ENST00000497682 EIF4G1Q04637 1599 aaKnown RBP12.35□□□□□ -0.43
H3F3AP3-201ENST00000497682 DCAF8L1A6NGE4 600 aa12.34□□□□□ -0.43
H3F3AP3-201ENST00000497682 CC2D2AQ9P2K1 1620 aa12.26□□□□□ -0.45
H3F3AP3-201ENST00000497682 SMARCA4P51532 1647 aa12.24□□□□□ -0.45
H3F3AP3-201ENST00000497682 BAZ1AQ9NRL2 1556 aaPredicted RBP12.24□□□□□ -0.45
H3F3AP3-201ENST00000497682 CECR2Q9BXF3 1484 aa12.22□□□□□ -0.45
H3F3AP3-201ENST00000497682 DNAJC5BQ9UF47 199 aa12.2□□□□□ -0.46
H3F3AP3-201ENST00000497682 PEG3Q9GZU2 1588 aa12.18□□□□□ -0.46
H3F3AP3-201ENST00000497682 MROH2BQ7Z745 1585 aa12.13□□□□□ -0.47
H3F3AP3-201ENST00000497682 SMARCA2P51531 1590 aa12.13□□□□□ -0.47
H3F3AP3-201ENST00000497682 NPM3O75607 178 aaKnown RBP12.12□□□□□ -0.47
H3F3AP3-201ENST00000497682 ATAD2BQ9ULI0 1458 aa12.09□□□□□ -0.47
H3F3AP3-201ENST00000497682 HMGXB3Q12766 1538 aa12.09□□□□□ -0.47
H3F3AP3-201ENST00000497682 NCAPD3P42695 1498 aa12.08□□□□□ -0.47
H3F3AP3-201ENST00000497682 CACNB1Q02641 598 aaPredicted RBP12.04□□□□□ -0.48
H3F3AP3-201ENST00000497682 RNF39Q9H2S5 420 aa12.04□□□□□ -0.48
H3F3AP3-201ENST00000497682 RSF1Q96T23 1441 aaPredicted RBP12.03□□□□□ -0.48
H3F3AP3-201ENST00000497682 WIZO95785 1651 aa12.03□□□□□ -0.48
H3F3AP3-201ENST00000497682 BAZ1BQ9UIG0 1483 aaKnown RBP12□□□□□ -0.49
H3F3AP3-201ENST00000497682 C1QBPQ07021 282 aaKnown RBP11.95□□□□□ -0.5
H3F3AP3-201ENST00000497682 KCNA4P22459 653 aa11.94□□□□□ -0.5
H3F3AP3-201ENST00000497682 TOP2AP11388 1531 aaKnown RBP11.93□□□□□ -0.5
H3F3AP3-201ENST00000497682 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.9□□□□□ -0.5
H3F3AP3-201ENST00000497682 LAMC3Q9Y6N6 1575 aa11.79□□□□□ -0.52
H3F3AP3-201ENST00000497682 PRDM2Q13029 1718 aa11.74□□□□□ -0.53
H3F3AP3-201ENST00000497682 CCDC88BA6NC98 1476 aa11.74□□□□□ -0.53
H3F3AP3-201ENST00000497682 CFTRP13569 1480 aa11.7□□□□□ -0.54
H3F3AP3-201ENST00000497682 CADPSQ9ULU8 1353 aa11.7□□□□□ -0.54
H3F3AP3-201ENST00000497682 NESP48681 1621 aa11.7□□□□□ -0.54
H3F3AP3-201ENST00000497682 SUPT5HO00267 1087 aaKnown RBP11.68□□□□□ -0.54
H3F3AP3-201ENST00000497682 KIF21AQ7Z4S6 1674 aa11.65□□□□□ -0.54
H3F3AP3-201ENST00000497682 PDS5BQ9NTI5 1447 aa11.63□□□□□ -0.55
H3F3AP3-201ENST00000497682 THOC2Q8NI27 1593 aaKnown RBP11.6□□□□□ -0.55
H3F3AP3-201ENST00000497682 ERCC6Q03468 1493 aa11.6□□□□□ -0.55
H3F3AP3-201ENST00000497682 U3KPZ7 1027 aaPredicted RBP11.58□□□□□ -0.56
H3F3AP3-201ENST00000497682 FANCD2Q9BXW9 1451 aa11.57□□□□□ -0.56
H3F3AP3-201ENST00000497682 CEP164Q9UPV0 1460 aa11.56□□□□□ -0.56
H3F3AP3-201ENST00000497682 MRC2Q9UBG0 1479 aa11.52□□□□□ -0.56
H3F3AP3-201ENST00000497682 WDR62O43379 1518 aa11.52□□□□□ -0.57
H3F3AP3-201ENST00000497682 APLP2Q06481 763 aa11.51□□□□□ -0.57
H3F3AP3-201ENST00000497682 CUX2O14529 1486 aa11.51□□□□□ -0.57
H3F3AP3-201ENST00000497682 SLC4A2P04920 1241 aa11.5□□□□□ -0.57
H3F3AP3-201ENST00000497682 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.49□□□□□ -0.57
H3F3AP3-201ENST00000497682 HNRNPUL2Q1KMD3 747 aaKnown RBP11.49□□□□□ -0.57
H3F3AP3-201ENST00000497682 URB2Q14146 1524 aaKnown RBP11.47□□□□□ -0.57
H3F3AP3-201ENST00000497682 ABCC8Q09428 1581 aa11.45□□□□□ -0.58
H3F3AP3-201ENST00000497682 DNMBPQ6XZF7 1577 aa11.45□□□□□ -0.58
H3F3AP3-201ENST00000497682 TOPBP1Q92547 1522 aa11.43□□□□□ -0.58
H3F3AP3-201ENST00000497682 CAPN15O75808 1086 aa11.41□□□□□ -0.58
H3F3AP3-201ENST00000497682 BIVM-ERCC5R4GMW8 1640 aa11.39□□□□□ -0.59
H3F3AP3-201ENST00000497682 SAMD1Q6SPF0 538 aaPredicted RBP11.39□□□□□ -0.59
H3F3AP3-201ENST00000497682 CUX1P39880 1505 aa11.39□□□□□ -0.59
H3F3AP3-201ENST00000497682 SLC4A1APQ9BWU0 796 aaKnown RBP11.38□□□□□ -0.59
H3F3AP3-201ENST00000497682 TOP2BQ02880 1626 aa11.36□□□□□ -0.59
H3F3AP3-201ENST00000497682 SYNJ1O43426 1573 aa11.34□□□□□ -0.59
H3F3AP3-201ENST00000497682 SPINK5Q9NQ38 1064 aaPredicted RBP11.34□□□□□ -0.59
H3F3AP3-201ENST00000497682 TARBP1Q13395 1621 aaKnown RBP11.34□□□□□ -0.59
H3F3AP3-201ENST00000497682 WRNQ14191 1432 aaPredicted RBP eCLIP11.34□□□□□ -0.59
H3F3AP3-201ENST00000497682 POLA1P09884 1462 aaPredicted RBP11.33□□□□□ -0.6
H3F3AP3-201ENST00000497682 IFT140Q96RY7 1462 aa11.32□□□□□ -0.6
H3F3AP3-201ENST00000497682 ZNF219Q9P2Y4 722 aaPredicted RBP11.32□□□□□ -0.6
H3F3AP3-201ENST00000497682 FGD5Q6ZNL6 1462 aa11.32□□□□□ -0.6
H3F3AP3-201ENST00000497682 WDR97A6NE52 1622 aa11.31□□□□□ -0.6
H3F3AP3-201ENST00000497682 MYCNP04198 464 aaPredicted RBP11.3□□□□□ -0.6
H3F3AP3-201ENST00000497682 DSG3P32926 999 aa11.29□□□□□ -0.6
H3F3AP3-201ENST00000497682 EIF4G3O43432 1585 aaKnown RBP11.26□□□□□ -0.61
H3F3AP3-201ENST00000497682 SOGA1O94964 1423 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms