RNA–Protein interactions for RNA: ENST00000494653.5

CEP104-209, Transcript of centrosomal protein 104, humanhuman

TSL 1 (best)

Gene CEP104, Length 2,174 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP104-209ENST00000494653 NISCHQ9Y2I1 1504 aa43.95■■■■■ 4.63
CEP104-209ENST00000494653 CCDC180Q9P1Z9 1646 aa38.3■■■■□ 3.72
CEP104-209ENST00000494653 SHROOM4Q9ULL8 1493 aa36.99■■■■□ 3.51
CEP104-209ENST00000494653 ZCCHC6Q5VYS8 1495 aaKnown RBP36.98■■■■□ 3.51
CEP104-209ENST00000494653 DCAF1Q9Y4B6 1507 aa36.38■■■■□ 3.41
CEP104-209ENST00000494653 SUPT5HO00267 1087 aaKnown RBP36.33■■■■□ 3.41
CEP104-209ENST00000494653 DCAF8L2P0C7V8 631 aa36.09■■■■□ 3.37
CEP104-209ENST00000494653 ABCC9O60706 1549 aa35.95■■■■□ 3.35
CEP104-209ENST00000494653 MYO15BQ96JP2 1530 aa35.89■■■■□ 3.34
CEP104-209ENST00000494653 NACADO15069 1562 aa35.59■■■■□ 3.29
CEP104-209ENST00000494653 CHIC1Q5VXU3 224 aa35.51■■■■□ 3.28
CEP104-209ENST00000494653 RB1CC1Q8TDY2 1594 aa35.23■■■■□ 3.23
CEP104-209ENST00000494653 SCRIBQ14160 1630 aa35.18■■■■□ 3.22
CEP104-209ENST00000494653 HRCP23327 699 aa34.67■■■■□ 3.14
CEP104-209ENST00000494653 UNC13AQ9UPW8 1703 aa34.63■■■■□ 3.13
CEP104-209ENST00000494653 RSF1Q96T23 1441 aaPredicted RBP34.5■■■■□ 3.11
CEP104-209ENST00000494653 PCGF6Q9BYE7 350 aa34.45■■■■□ 3.1
CEP104-209ENST00000494653 LOC105371045A0A1W2PR82 267 aa34.35■■■■□ 3.09
CEP104-209ENST00000494653 BICRAQ9NZM4 1560 aa34.2■■■■□ 3.07
CEP104-209ENST00000494653 CECR2Q9BXF3 1484 aa34.12■■■■□ 3.05
CEP104-209ENST00000494653 MROH2BQ7Z745 1585 aa33.96■■■■□ 3.03
CEP104-209ENST00000494653 BAZ1AQ9NRL2 1556 aaPredicted RBP33.93■■■■□ 3.02
CEP104-209ENST00000494653 TRIM41Q8WV44 630 aa33.92■■■■□ 3.02
CEP104-209ENST00000494653 TRIM26Q12899 539 aaPredicted RBP33.89■■■■□ 3.02
CEP104-209ENST00000494653 PABPN1Q86U42 306 aaKnown RBP eCLIP33.89■■■■□ 3.02
CEP104-209ENST00000494653 SMARCA4P51532 1647 aa33.77■■■■□ 3
CEP104-209ENST00000494653 PPARGC1BQ86YN6 1023 aaKnown RBP33.75■■■□□ 2.99
CEP104-209ENST00000494653 WIZO95785 1651 aa33.71■■■□□ 2.99
CEP104-209ENST00000494653 FAM9AQ8IZU1 332 aaPredicted RBP33.52■■■□□ 2.96
CEP104-209ENST00000494653 EIF4G1Q04637 1599 aaKnown RBP33.4■■■□□ 2.94
CEP104-209ENST00000494653 PEG3Q9GZU2 1588 aa33.38■■■□□ 2.93
CEP104-209ENST00000494653 TOP2AP11388 1531 aaKnown RBP33.36■■■□□ 2.93
CEP104-209ENST00000494653 ZEB1P37275 1124 aaPredicted RBP33.28■■■□□ 2.92
CEP104-209ENST00000494653 ATAD2BQ9ULI0 1458 aa33.14■■■□□ 2.9
CEP104-209ENST00000494653 SMARCA2P51531 1590 aa33.13■■■□□ 2.89
CEP104-209ENST00000494653 EHMT2Q96KQ7 1210 aa33.12■■■□□ 2.89
CEP104-209ENST00000494653 CCDC88BA6NC98 1476 aa33.01■■■□□ 2.87
CEP104-209ENST00000494653 BAZ1BQ9UIG0 1483 aaKnown RBP32.95■■■□□ 2.86
CEP104-209ENST00000494653 ABCC8Q09428 1581 aa32.92■■■□□ 2.86
CEP104-209ENST00000494653 NCAPD3P42695 1498 aa32.83■■■□□ 2.85
CEP104-209ENST00000494653 HMGXB3Q12766 1538 aa32.83■■■□□ 2.85
CEP104-209ENST00000494653 WRNQ14191 1432 aaPredicted RBP eCLIP32.69■■■□□ 2.82
CEP104-209ENST00000494653 EEA1Q15075 1411 aa32.66■■■□□ 2.82
CEP104-209ENST00000494653 SOGA1O94964 1423 aa32.62■■■□□ 2.81
CEP104-209ENST00000494653 CEP162Q5TB80 1403 aa32.59■■■□□ 2.81
CEP104-209ENST00000494653 CC2D2AQ9P2K1 1620 aa32.59■■■□□ 2.81
CEP104-209ENST00000494653 TNIKQ9UKE5 1360 aa32.57■■■□□ 2.8
CEP104-209ENST00000494653 CSRNP3Q8WYN3 585 aa32.46■■■□□ 2.79
CEP104-209ENST00000494653 RUSC2Q8N2Y8 1516 aa32.44■■■□□ 2.78
CEP104-209ENST00000494653 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.39■■■□□ 2.78
CEP104-209ENST00000494653 GOLGA3Q08378 1498 aa32.38■■■□□ 2.77
CEP104-209ENST00000494653 CCER1Q8TC90 406 aaPredicted RBP32.36■■■□□ 2.77
CEP104-209ENST00000494653 UBTFP17480 764 aaKnown RBP32.26■■■□□ 2.76
CEP104-209ENST00000494653 SYNJ1O43426 1573 aa32.26■■■□□ 2.75
CEP104-209ENST00000494653 KIF21BO75037 1637 aa32.21■■■□□ 2.75
CEP104-209ENST00000494653 CEP164Q9UPV0 1460 aa32.19■■■□□ 2.74
CEP104-209ENST00000494653 CFTRP13569 1480 aa32.15■■■□□ 2.74
CEP104-209ENST00000494653 TTBK1Q5TCY1 1321 aaPredicted RBP32.13■■■□□ 2.73
CEP104-209ENST00000494653 PRDM2Q13029 1718 aa32.1■■■□□ 2.73
CEP104-209ENST00000494653 CADPSQ9ULU8 1353 aa31.97■■■□□ 2.71
CEP104-209ENST00000494653 CLIP1P30622 1438 aa31.96■■■□□ 2.71
CEP104-209ENST00000494653 SCAF1Q9H7N4 1312 aaKnown RBP31.94■■■□□ 2.7
CEP104-209ENST00000494653 TOP2BQ02880 1626 aa31.92■■■□□ 2.7
CEP104-209ENST00000494653 VPS8Q8N3P4 1428 aa31.88■■■□□ 2.69
CEP104-209ENST00000494653 BIVM-ERCC5R4GMW8 1640 aa31.88■■■□□ 2.69
CEP104-209ENST00000494653 RAPGEF2Q9Y4G8 1499 aa31.85■■■□□ 2.69
CEP104-209ENST00000494653 DIEXFQ68CQ4 756 aaKnown RBP31.82■■■□□ 2.68
CEP104-209ENST00000494653 CUX1P39880 1505 aa31.74■■■□□ 2.67
CEP104-209ENST00000494653 LAMC3Q9Y6N6 1575 aa31.7■■■□□ 2.67
CEP104-209ENST00000494653 ERICH3Q5RHP9 1530 aa31.68■■■□□ 2.66
CEP104-209ENST00000494653 ACIN1Q9UKV3 1341 aaKnown RBP31.67■■■□□ 2.66
CEP104-209ENST00000494653 DNAJC5BQ9UF47 199 aa31.66■■■□□ 2.66
CEP104-209ENST00000494653 NESP48681 1621 aa31.64■■■□□ 2.66
CEP104-209ENST00000494653 FANCD2Q9BXW9 1451 aa31.63■■■□□ 2.65
CEP104-209ENST00000494653 APLP2Q06481 763 aa31.63■■■□□ 2.65
CEP104-209ENST00000494653 PRXQ9BXM0 1461 aa31.6■■■□□ 2.65
CEP104-209ENST00000494653 ZNF316A6NFI3 1004 aaPredicted RBP31.6■■■□□ 2.65
CEP104-209ENST00000494653 HNRNPUL2Q1KMD3 747 aaKnown RBP31.59■■■□□ 2.65
CEP104-209ENST00000494653 PELP1Q8IZL8 1130 aaKnown RBP31.58■■■□□ 2.65
CEP104-209ENST00000494653 NEUROD1Q13562 356 aa31.56■■■□□ 2.64
CEP104-209ENST00000494653 CENPBP07199 599 aaPredicted RBP31.51■■■□□ 2.63
CEP104-209ENST00000494653 ARAP1Q96P48 1450 aa31.46■■■□□ 2.63
CEP104-209ENST00000494653 RANGAP1P46060 587 aaPredicted RBP31.43■■■□□ 2.62
CEP104-209ENST00000494653 DNMBPQ6XZF7 1577 aa31.41■■■□□ 2.62
CEP104-209ENST00000494653 KIF27Q86VH2 1401 aa31.41■■■□□ 2.62
CEP104-209ENST00000494653 PDS5BQ9NTI5 1447 aa31.39■■■□□ 2.62
CEP104-209ENST00000494653 FGD5Q6ZNL6 1462 aa31.35■■■□□ 2.61
CEP104-209ENST00000494653 KIF21AQ7Z4S6 1674 aa31.33■■■□□ 2.61
CEP104-209ENST00000494653 TOPBP1Q92547 1522 aa31.33■■■□□ 2.61
CEP104-209ENST00000494653 URB2Q14146 1524 aaKnown RBP31.24■■■□□ 2.59
CEP104-209ENST00000494653 CLSPNQ9HAW4 1339 aa31.24■■■□□ 2.59
CEP104-209ENST00000494653 GTF3C3Q9Y5Q9 886 aa31.24■■■□□ 2.59
CEP104-209ENST00000494653 POLA1P09884 1462 aaPredicted RBP31.19■■■□□ 2.58
CEP104-209ENST00000494653 RRBP1Q9P2E9 1410 aaKnown RBP31.18■■■□□ 2.58
CEP104-209ENST00000494653 KANK4Q5T7N3 995 aaPredicted RBP31.17■■■□□ 2.58
CEP104-209ENST00000494653 CUX2O14529 1486 aa31.16■■■□□ 2.58
CEP104-209ENST00000494653 ARHGAP35Q9NRY4 1499 aa31.16■■■□□ 2.58
CEP104-209ENST00000494653 DHX57Q6P158 1386 aaKnown RBP31.15■■■□□ 2.58
CEP104-209ENST00000494653 ABCA10Q8WWZ4 1543 aa31.1■■■□□ 2.57
CEP104-209ENST00000494653 MIER1Q8N108 512 aa31.09■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 130.9 ms