RNA–Protein interactions for RNA: ENST00000494297.5

SRPRB-205, Transcript of SRP receptor subunit beta, humanhuman

TSL 2

Gene SRPRB, Length 555 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRB-205ENST00000494297 AEBP2Q6ZN18 517 aaPredicted RBP15.09■□□□□ 0.01
SRPRB-205ENST00000494297 CHIC1Q5VXU3 224 aa14.09□□□□□ -0.15
SRPRB-205ENST00000494297 NISCHQ9Y2I1 1504 aa12.95□□□□□ -0.34
SRPRB-205ENST00000494297 SENP3Q9H4L4 574 aaPredicted RBP12.95□□□□□ -0.34
SRPRB-205ENST00000494297 PHF23Q9BUL5 403 aaPredicted RBP12.69□□□□□ -0.38
SRPRB-205ENST00000494297 POTEDQ86YR6 584 aa12.58□□□□□ -0.4
SRPRB-205ENST00000494297 FOXD1Q16676 465 aa12.17□□□□□ -0.46
SRPRB-205ENST00000494297 MSH5O43196 834 aa11.64□□□□□ -0.55
SRPRB-205ENST00000494297 CCDC180Q9P1Z9 1646 aa11.45□□□□□ -0.58
SRPRB-205ENST00000494297 PLPPR3Q6T4P5 718 aa11.29□□□□□ -0.6
SRPRB-205ENST00000494297 PIAS4Q8N2W9 510 aaPredicted RBP11.17□□□□□ -0.62
SRPRB-205ENST00000494297 ABCC9O60706 1549 aa11.16□□□□□ -0.62
SRPRB-205ENST00000494297 ADRA2BP18089 450 aa11.1□□□□□ -0.63
SRPRB-205ENST00000494297 PPP6R1Q9UPN7 881 aa11.08□□□□□ -0.64
SRPRB-205ENST00000494297 DCAF8L2P0C7V8 631 aa10.81□□□□□ -0.68
SRPRB-205ENST00000494297 NACADO15069 1562 aa10.79□□□□□ -0.68
SRPRB-205ENST00000494297 ZCCHC6Q5VYS8 1495 aaKnown RBP10.79□□□□□ -0.68
SRPRB-205ENST00000494297 MYO15BQ96JP2 1530 aa10.79□□□□□ -0.68
SRPRB-205ENST00000494297 RB1CC1Q8TDY2 1594 aa10.77□□□□□ -0.69
SRPRB-205ENST00000494297 DCAF1Q9Y4B6 1507 aa10.74□□□□□ -0.69
SRPRB-205ENST00000494297 PABPN1Q86U42 306 aaKnown RBP eCLIP10.48□□□□□ -0.73
SRPRB-205ENST00000494297 UNC13AQ9UPW8 1703 aa10.46□□□□□ -0.74
SRPRB-205ENST00000494297 BICRAQ9NZM4 1560 aa10.44□□□□□ -0.74
SRPRB-205ENST00000494297 SCRIBQ14160 1630 aa10.42□□□□□ -0.74
SRPRB-205ENST00000494297 CACNB1Q02641 598 aaPredicted RBP10.39□□□□□ -0.75
SRPRB-205ENST00000494297 SHROOM4Q9ULL8 1493 aa10.37□□□□□ -0.75
SRPRB-205ENST00000494297 DNAJC5BQ9UF47 199 aa10.27□□□□□ -0.77
SRPRB-205ENST00000494297 MAPK8IP2Q13387 824 aaPredicted RBP10.2□□□□□ -0.78
SRPRB-205ENST00000494297 DMRT2Q9Y5R5 561 aa10.18□□□□□ -0.78
SRPRB-205ENST00000494297 EIF4G1Q04637 1599 aaKnown RBP10.16□□□□□ -0.78
SRPRB-205ENST00000494297 SCAF1Q9H7N4 1312 aaKnown RBP10.13□□□□□ -0.79
SRPRB-205ENST00000494297 CC2D2AQ9P2K1 1620 aa10.1□□□□□ -0.79
SRPRB-205ENST00000494297 CECR2Q9BXF3 1484 aa10.08□□□□□ -0.8
SRPRB-205ENST00000494297 BAZ1AQ9NRL2 1556 aaPredicted RBP10.02□□□□□ -0.81
SRPRB-205ENST00000494297 SMARCA4P51532 1647 aa10□□□□□ -0.81
SRPRB-205ENST00000494297 NCAPD3P42695 1498 aa9.99□□□□□ -0.81
SRPRB-205ENST00000494297 ATAD2BQ9ULI0 1458 aa9.98□□□□□ -0.81
SRPRB-205ENST00000494297 MROH2BQ7Z745 1585 aa9.97□□□□□ -0.81
SRPRB-205ENST00000494297 SMARCA2P51531 1590 aa9.95□□□□□ -0.82
SRPRB-205ENST00000494297 PEG3Q9GZU2 1588 aa9.94□□□□□ -0.82
SRPRB-205ENST00000494297 PPP4R3CPQ6ZMV5 832 aa9.91□□□□□ -0.82
SRPRB-205ENST00000494297 HMGXB3Q12766 1538 aa9.9□□□□□ -0.82
SRPRB-205ENST00000494297 RSF1Q96T23 1441 aaPredicted RBP9.9□□□□□ -0.83
SRPRB-205ENST00000494297 RNF39Q9H2S5 420 aa9.89□□□□□ -0.83
SRPRB-205ENST00000494297 BAZ1BQ9UIG0 1483 aaKnown RBP9.87□□□□□ -0.83
SRPRB-205ENST00000494297 DCAF8L1A6NGE4 600 aa9.87□□□□□ -0.83
SRPRB-205ENST00000494297 WIZO95785 1651 aa9.83□□□□□ -0.84
SRPRB-205ENST00000494297 TOP2AP11388 1531 aaKnown RBP9.75□□□□□ -0.85
SRPRB-205ENST00000494297 POTEHQ6S545 545 aa9.7□□□□□ -0.86
SRPRB-205ENST00000494297 CNKSR2Q8WXI2 1034 aa9.7□□□□□ -0.86
SRPRB-205ENST00000494297 CADPSQ9ULU8 1353 aa9.7□□□□□ -0.86
SRPRB-205ENST00000494297 C1QBPQ07021 282 aaKnown RBP9.69□□□□□ -0.86
SRPRB-205ENST00000494297 NESP48681 1621 aa9.67□□□□□ -0.86
SRPRB-205ENST00000494297 LAMC3Q9Y6N6 1575 aa9.67□□□□□ -0.86
SRPRB-205ENST00000494297 CCDC88BA6NC98 1476 aa9.66□□□□□ -0.86
SRPRB-205ENST00000494297 SUPT5HO00267 1087 aaKnown RBP9.66□□□□□ -0.86
SRPRB-205ENST00000494297 CFTRP13569 1480 aa9.64□□□□□ -0.87
SRPRB-205ENST00000494297 PDS5BQ9NTI5 1447 aa9.64□□□□□ -0.87
SRPRB-205ENST00000494297 HOXD11P31277 338 aaPredicted RBP9.63□□□□□ -0.87
SRPRB-205ENST00000494297 ERCC6Q03468 1493 aa9.61□□□□□ -0.87
SRPRB-205ENST00000494297 RNF216Q9NWF9 866 aaPredicted RBP9.6□□□□□ -0.87
SRPRB-205ENST00000494297 FANCD2Q9BXW9 1451 aa9.55□□□□□ -0.88
SRPRB-205ENST00000494297 NCBP3Q53F19 620 aaKnown RBP9.55□□□□□ -0.88
SRPRB-205ENST00000494297 CUX2O14529 1486 aa9.53□□□□□ -0.88
SRPRB-205ENST00000494297 CEP164Q9UPV0 1460 aa9.53□□□□□ -0.88
SRPRB-205ENST00000494297 KIF21AQ7Z4S6 1674 aa9.51□□□□□ -0.89
SRPRB-205ENST00000494297 MRC2Q9UBG0 1479 aa9.5□□□□□ -0.89
SRPRB-205ENST00000494297 THOC2Q8NI27 1593 aaKnown RBP9.5□□□□□ -0.89
SRPRB-205ENST00000494297 PRDM2Q13029 1718 aa9.47□□□□□ -0.89
SRPRB-205ENST00000494297 WDR62O43379 1518 aa9.46□□□□□ -0.89
SRPRB-205ENST00000494297 URB2Q14146 1524 aaKnown RBP9.45□□□□□ -0.9
SRPRB-205ENST00000494297 ABCC8Q09428 1581 aa9.44□□□□□ -0.9
SRPRB-205ENST00000494297 TOPBP1Q92547 1522 aa9.4□□□□□ -0.91
SRPRB-205ENST00000494297 DNMBPQ6XZF7 1577 aa9.37□□□□□ -0.91
SRPRB-205ENST00000494297 NPM3O75607 178 aaKnown RBP9.37□□□□□ -0.91
SRPRB-205ENST00000494297 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.36□□□□□ -0.91
SRPRB-205ENST00000494297 IFT140Q96RY7 1462 aa9.34□□□□□ -0.91
SRPRB-205ENST00000494297 CUX1P39880 1505 aa9.34□□□□□ -0.91
SRPRB-205ENST00000494297 POLA1P09884 1462 aaPredicted RBP9.33□□□□□ -0.92
SRPRB-205ENST00000494297 SOGA1O94964 1423 aa9.31□□□□□ -0.92
SRPRB-205ENST00000494297 WRNQ14191 1432 aaPredicted RBP eCLIP9.31□□□□□ -0.92
SRPRB-205ENST00000494297 FGD5Q6ZNL6 1462 aa9.3□□□□□ -0.92
SRPRB-205ENST00000494297 RAD54L2Q9Y4B4 1467 aa9.28□□□□□ -0.92
SRPRB-205ENST00000494297 TARBP1Q13395 1621 aaKnown RBP9.28□□□□□ -0.92
SRPRB-205ENST00000494297 TOP2BQ02880 1626 aa9.27□□□□□ -0.92
SRPRB-205ENST00000494297 ZNF608Q9ULD9 1512 aaPredicted RBP9.27□□□□□ -0.93
SRPRB-205ENST00000494297 BIVM-ERCC5R4GMW8 1640 aa9.26□□□□□ -0.93
SRPRB-205ENST00000494297 SYNJ1O43426 1573 aa9.25□□□□□ -0.93
SRPRB-205ENST00000494297 AQRO60306 1485 aaKnown RBP eCLIP9.25□□□□□ -0.93
SRPRB-205ENST00000494297 TDRD9Q8NDG6 1382 aaKnown RBP9.24□□□□□ -0.93
SRPRB-205ENST00000494297 ABCA10Q8WWZ4 1543 aa9.23□□□□□ -0.93
SRPRB-205ENST00000494297 DNAJC5Q9H3Z4 198 aa9.23□□□□□ -0.93
SRPRB-205ENST00000494297 WDR97A6NE52 1622 aa9.23□□□□□ -0.93
SRPRB-205ENST00000494297 EIF4G3O43432 1585 aaKnown RBP9.2□□□□□ -0.94
SRPRB-205ENST00000494297 KCNA4P22459 653 aa9.19□□□□□ -0.94
SRPRB-205ENST00000494297 OSCARQ8IYS5 282 aa9.19□□□□□ -0.94
SRPRB-205ENST00000494297 GAPVD1Q14C86 1478 aa9.19□□□□□ -0.94
SRPRB-205ENST00000494297 GRIN2BQ13224 1484 aa9.18□□□□□ -0.94
SRPRB-205ENST00000494297 ABCA5Q8WWZ7 1642 aa9.16□□□□□ -0.94
SRPRB-205ENST00000494297 MAGI1Q96QZ7 1491 aaPredicted RBP9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms