RNA–Protein interactions for RNA: ENST00000492260.5

ABCA2-221, Transcript of ATP binding cassette subfamily A member 2, humanhuman

TSL 5

Gene ABCA2, Length 2,062 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA2-221ENST00000492260 NISCHQ9Y2I1 1504 aa40.62■■■■■ 4.09
ABCA2-221ENST00000492260 CCDC180Q9P1Z9 1646 aa34.89■■■■□ 3.18
ABCA2-221ENST00000492260 ZCCHC6Q5VYS8 1495 aaKnown RBP34.33■■■■□ 3.09
ABCA2-221ENST00000492260 SHROOM4Q9ULL8 1493 aa33.95■■■■□ 3.02
ABCA2-221ENST00000492260 DCAF1Q9Y4B6 1507 aa33.56■■■□□ 2.96
ABCA2-221ENST00000492260 DCAF8L2P0C7V8 631 aa33.27■■■□□ 2.92
ABCA2-221ENST00000492260 SUPT5HO00267 1087 aaKnown RBP33.16■■■□□ 2.9
ABCA2-221ENST00000492260 MYO15BQ96JP2 1530 aa32.76■■■□□ 2.83
ABCA2-221ENST00000492260 ABCC9O60706 1549 aa32.35■■■□□ 2.77
ABCA2-221ENST00000492260 SCRIBQ14160 1630 aa32.31■■■□□ 2.76
ABCA2-221ENST00000492260 CHIC1Q5VXU3 224 aa32.28■■■□□ 2.76
ABCA2-221ENST00000492260 NACADO15069 1562 aa32.26■■■□□ 2.76
ABCA2-221ENST00000492260 RSF1Q96T23 1441 aaPredicted RBP31.94■■■□□ 2.7
ABCA2-221ENST00000492260 RB1CC1Q8TDY2 1594 aa31.75■■■□□ 2.67
ABCA2-221ENST00000492260 CECR2Q9BXF3 1484 aa31.52■■■□□ 2.64
ABCA2-221ENST00000492260 MROH2BQ7Z745 1585 aa31.45■■■□□ 2.63
ABCA2-221ENST00000492260 BAZ1AQ9NRL2 1556 aaPredicted RBP31.27■■■□□ 2.6
ABCA2-221ENST00000492260 WIZO95785 1651 aa31.26■■■□□ 2.59
ABCA2-221ENST00000492260 UNC13AQ9UPW8 1703 aa31.21■■■□□ 2.59
ABCA2-221ENST00000492260 LOC105371045A0A1W2PR82 267 aa31.12■■■□□ 2.57
ABCA2-221ENST00000492260 TRIM41Q8WV44 630 aa31.08■■■□□ 2.57
ABCA2-221ENST00000492260 SMARCA4P51532 1647 aa31.01■■■□□ 2.55
ABCA2-221ENST00000492260 TOP2AP11388 1531 aaKnown RBP30.92■■■□□ 2.54
ABCA2-221ENST00000492260 EIF4G1Q04637 1599 aaKnown RBP30.86■■■□□ 2.53
ABCA2-221ENST00000492260 BICRAQ9NZM4 1560 aa30.82■■■□□ 2.52
ABCA2-221ENST00000492260 PCGF6Q9BYE7 350 aa30.8■■■□□ 2.52
ABCA2-221ENST00000492260 HRCP23327 699 aa30.75■■■□□ 2.51
ABCA2-221ENST00000492260 SMARCA2P51531 1590 aa30.68■■■□□ 2.5
ABCA2-221ENST00000492260 CCDC88BA6NC98 1476 aa30.65■■■□□ 2.5
ABCA2-221ENST00000492260 PEG3Q9GZU2 1588 aa30.57■■■□□ 2.48
ABCA2-221ENST00000492260 FAM9AQ8IZU1 332 aaPredicted RBP30.57■■■□□ 2.48
ABCA2-221ENST00000492260 PABPN1Q86U42 306 aaKnown RBP eCLIP30.54■■■□□ 2.48
ABCA2-221ENST00000492260 TRIM26Q12899 539 aaPredicted RBP30.51■■■□□ 2.47
ABCA2-221ENST00000492260 ABCC8Q09428 1581 aa30.36■■■□□ 2.45
ABCA2-221ENST00000492260 ATAD2BQ9ULI0 1458 aa30.25■■■□□ 2.43
ABCA2-221ENST00000492260 EHMT2Q96KQ7 1210 aa30.13■■■□□ 2.41
ABCA2-221ENST00000492260 BAZ1BQ9UIG0 1483 aaKnown RBP30.13■■■□□ 2.41
ABCA2-221ENST00000492260 EEA1Q15075 1411 aa30.12■■■□□ 2.41
ABCA2-221ENST00000492260 WRNQ14191 1432 aaPredicted RBP eCLIP30.02■■■□□ 2.4
ABCA2-221ENST00000492260 SOGA1O94964 1423 aa30.01■■■□□ 2.4
ABCA2-221ENST00000492260 PPARGC1BQ86YN6 1023 aaKnown RBP29.89■■■□□ 2.37
ABCA2-221ENST00000492260 TNIKQ9UKE5 1360 aa29.88■■■□□ 2.37
ABCA2-221ENST00000492260 CSRNP3Q8WYN3 585 aa29.87■■■□□ 2.37
ABCA2-221ENST00000492260 SYNJ1O43426 1573 aa29.87■■■□□ 2.37
ABCA2-221ENST00000492260 RUSC2Q8N2Y8 1516 aa29.84■■■□□ 2.37
ABCA2-221ENST00000492260 HMGXB3Q12766 1538 aa29.83■■■□□ 2.37
ABCA2-221ENST00000492260 CEP162Q5TB80 1403 aa29.81■■■□□ 2.36
ABCA2-221ENST00000492260 ZEB1P37275 1124 aaPredicted RBP29.81■■■□□ 2.36
ABCA2-221ENST00000492260 NCAPD3P42695 1498 aa29.79■■■□□ 2.36
ABCA2-221ENST00000492260 GOLGA3Q08378 1498 aa29.77■■■□□ 2.36
ABCA2-221ENST00000492260 KIF21BO75037 1637 aa29.69■■■□□ 2.34
ABCA2-221ENST00000492260 CEP164Q9UPV0 1460 aa29.65■■■□□ 2.34
ABCA2-221ENST00000492260 TOP2BQ02880 1626 aa29.65■■■□□ 2.34
ABCA2-221ENST00000492260 UBTFP17480 764 aaKnown RBP29.6■■■□□ 2.33
ABCA2-221ENST00000492260 BIVM-ERCC5R4GMW8 1640 aa29.59■■■□□ 2.33
ABCA2-221ENST00000492260 CFTRP13569 1480 aa29.44■■■□□ 2.3
ABCA2-221ENST00000492260 RAPGEF2Q9Y4G8 1499 aa29.35■■■□□ 2.29
ABCA2-221ENST00000492260 CUX1P39880 1505 aa29.34■■■□□ 2.29
ABCA2-221ENST00000492260 CLIP1P30622 1438 aa29.34■■■□□ 2.29
ABCA2-221ENST00000492260 PRDM2Q13029 1718 aa29.33■■■□□ 2.29
ABCA2-221ENST00000492260 ERICH3Q5RHP9 1530 aa29.29■■■□□ 2.28
ABCA2-221ENST00000492260 PRXQ9BXM0 1461 aa29.24■■■□□ 2.27
ABCA2-221ENST00000492260 VPS8Q8N3P4 1428 aa29.23■■■□□ 2.27
ABCA2-221ENST00000492260 KIF27Q86VH2 1401 aa29.16■■■□□ 2.26
ABCA2-221ENST00000492260 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.14■■■□□ 2.26
ABCA2-221ENST00000492260 CCER1Q8TC90 406 aaPredicted RBP29.14■■■□□ 2.25
ABCA2-221ENST00000492260 TTBK1Q5TCY1 1321 aaPredicted RBP29.13■■■□□ 2.25
ABCA2-221ENST00000492260 CADPSQ9ULU8 1353 aa29.12■■■□□ 2.25
ABCA2-221ENST00000492260 CC2D2AQ9P2K1 1620 aa29.1■■■□□ 2.25
ABCA2-221ENST00000492260 APLP2Q06481 763 aa28.96■■■□□ 2.23
ABCA2-221ENST00000492260 ARAP1Q96P48 1450 aa28.93■■■□□ 2.22
ABCA2-221ENST00000492260 CUX2O14529 1486 aa28.86■■■□□ 2.21
ABCA2-221ENST00000492260 FGD5Q6ZNL6 1462 aa28.85■■■□□ 2.21
ABCA2-221ENST00000492260 RANGAP1P46060 587 aaPredicted RBP28.84■■■□□ 2.21
ABCA2-221ENST00000492260 IGF1RP08069 1367 aa28.81■■■□□ 2.2
ABCA2-221ENST00000492260 FANCD2Q9BXW9 1451 aa28.81■■■□□ 2.2
ABCA2-221ENST00000492260 ARHGAP35Q9NRY4 1499 aa28.73■■■□□ 2.19
ABCA2-221ENST00000492260 DNMBPQ6XZF7 1577 aa28.73■■■□□ 2.19
ABCA2-221ENST00000492260 CARMIL1Q5VZK9 1371 aa28.68■■■□□ 2.18
ABCA2-221ENST00000492260 HNRNPUL2Q1KMD3 747 aaKnown RBP28.67■■■□□ 2.18
ABCA2-221ENST00000492260 TOPBP1Q92547 1522 aa28.61■■■□□ 2.17
ABCA2-221ENST00000492260 ABCA10Q8WWZ4 1543 aa28.61■■■□□ 2.17
ABCA2-221ENST00000492260 LAMC3Q9Y6N6 1575 aa28.6■■■□□ 2.17
ABCA2-221ENST00000492260 NESP48681 1621 aa28.56■■■□□ 2.16
ABCA2-221ENST00000492260 POLA1P09884 1462 aaPredicted RBP28.56■■■□□ 2.16
ABCA2-221ENST00000492260 KANK4Q5T7N3 995 aaPredicted RBP28.55■■■□□ 2.16
ABCA2-221ENST00000492260 RRBP1Q9P2E9 1410 aaKnown RBP28.53■■■□□ 2.16
ABCA2-221ENST00000492260 MAP3K1Q13233 1512 aa28.52■■■□□ 2.16
ABCA2-221ENST00000492260 RAD54L2Q9Y4B4 1467 aa28.49■■■□□ 2.15
ABCA2-221ENST00000492260 CUL7Q14999 1698 aa28.47■■■□□ 2.15
ABCA2-221ENST00000492260 TIAM1Q13009 1591 aa28.42■■■□□ 2.14
ABCA2-221ENST00000492260 WDR97A6NE52 1622 aa28.42■■■□□ 2.14
ABCA2-221ENST00000492260 DIEXFQ68CQ4 756 aaKnown RBP28.41■■■□□ 2.14
ABCA2-221ENST00000492260 URB2Q14146 1524 aaKnown RBP28.4■■■□□ 2.14
ABCA2-221ENST00000492260 CLSPNQ9HAW4 1339 aa28.39■■■□□ 2.14
ABCA2-221ENST00000492260 FHAD1B1AJZ9 1412 aa28.39■■■□□ 2.14
ABCA2-221ENST00000492260 CCNB3Q8WWL7 1395 aa28.36■■■□□ 2.13
ABCA2-221ENST00000492260 PDS5BQ9NTI5 1447 aa28.35■■■□□ 2.13
ABCA2-221ENST00000492260 EFCAB5A4FU69 1503 aa28.35■■■□□ 2.13
ABCA2-221ENST00000492260 ZNF316A6NFI3 1004 aaPredicted RBP28.34■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms