RNA–Protein interactions for RNA: ENST00000491627.1

NEK10-211, Transcript of NIMA related kinase 10, humanhuman

TSL 2

Gene NEK10, Length 3,713 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK10-211ENST00000491627 NISCHQ9Y2I1 1504 aa20■□□□□ 0.79
NEK10-211ENST00000491627 DCAF8L2P0C7V8 631 aa18.15■□□□□ 0.5
NEK10-211ENST00000491627 SHROOM4Q9ULL8 1493 aa17.74■□□□□ 0.43
NEK10-211ENST00000491627 SUPT5HO00267 1087 aaKnown RBP17.3■□□□□ 0.36
NEK10-211ENST00000491627 ABCC9O60706 1549 aa16.93■□□□□ 0.3
NEK10-211ENST00000491627 CCDC180Q9P1Z9 1646 aa16.81■□□□□ 0.28
NEK10-211ENST00000491627 ZCCHC6Q5VYS8 1495 aaKnown RBP16.7■□□□□ 0.26
NEK10-211ENST00000491627 PABPN1Q86U42 306 aaKnown RBP eCLIP16.39■□□□□ 0.21
NEK10-211ENST00000491627 EHMT2Q96KQ7 1210 aa16.38■□□□□ 0.21
NEK10-211ENST00000491627 SCRIBQ14160 1630 aa16.35■□□□□ 0.21
NEK10-211ENST00000491627 FAM9AQ8IZU1 332 aaPredicted RBP16.17■□□□□ 0.18
NEK10-211ENST00000491627 CHIC1Q5VXU3 224 aa16.05■□□□□ 0.16
NEK10-211ENST00000491627 DCAF1Q9Y4B6 1507 aa16■□□□□ 0.15
NEK10-211ENST00000491627 TRIM41Q8WV44 630 aa15.94■□□□□ 0.14
NEK10-211ENST00000491627 NACADO15069 1562 aa15.91■□□□□ 0.14
NEK10-211ENST00000491627 RB1CC1Q8TDY2 1594 aa15.9■□□□□ 0.14
NEK10-211ENST00000491627 CECR2Q9BXF3 1484 aa15.89■□□□□ 0.13
NEK10-211ENST00000491627 LOC105371045A0A1W2PR82 267 aa15.88■□□□□ 0.13
NEK10-211ENST00000491627 RSF1Q96T23 1441 aaPredicted RBP15.81■□□□□ 0.12
NEK10-211ENST00000491627 RANGAP1P46060 587 aaPredicted RBP15.68■□□□□ 0.1
NEK10-211ENST00000491627 TTBK1Q5TCY1 1321 aaPredicted RBP15.67■□□□□ 0.1
NEK10-211ENST00000491627 MROH2BQ7Z745 1585 aa15.66■□□□□ 0.1
NEK10-211ENST00000491627 MYO15BQ96JP2 1530 aa15.63■□□□□ 0.09
NEK10-211ENST00000491627 PPARGC1BQ86YN6 1023 aaKnown RBP15.59■□□□□ 0.09
NEK10-211ENST00000491627 PCGF6Q9BYE7 350 aa15.55■□□□□ 0.08
NEK10-211ENST00000491627 WIZO95785 1651 aa15.52■□□□□ 0.07
NEK10-211ENST00000491627 UBTFP17480 764 aaKnown RBP15.44■□□□□ 0.06
NEK10-211ENST00000491627 BAZ1AQ9NRL2 1556 aaPredicted RBP15.43■□□□□ 0.06
NEK10-211ENST00000491627 UNC13AQ9UPW8 1703 aa15.28■□□□□ 0.04
NEK10-211ENST00000491627 CCDC88BA6NC98 1476 aa15.27■□□□□ 0.04
NEK10-211ENST00000491627 SMARCA4P51532 1647 aa15.27■□□□□ 0.04
NEK10-211ENST00000491627 BAZ1BQ9UIG0 1483 aaKnown RBP15.27■□□□□ 0.03
NEK10-211ENST00000491627 BICRAQ9NZM4 1560 aa15.26■□□□□ 0.03
NEK10-211ENST00000491627 ABCC8Q09428 1581 aa15.22■□□□□ 0.03
NEK10-211ENST00000491627 ATAD2BQ9ULI0 1458 aa15.15■□□□□ 0.02
NEK10-211ENST00000491627 TOP2AP11388 1531 aaKnown RBP15.12■□□□□ 0.01
NEK10-211ENST00000491627 ATP1B4Q9UN42 357 aaPredicted RBP15.12■□□□□ 0.01
NEK10-211ENST00000491627 CSRNP3Q8WYN3 585 aa15.1■□□□□ 0.01
NEK10-211ENST00000491627 APLP2Q06481 763 aa15.07■□□□□ 0
NEK10-211ENST00000491627 SOGA1O94964 1423 aa15.06■□□□□ 0
NEK10-211ENST00000491627 DNAJC5BQ9UF47 199 aa15.05■□□□□ -0
NEK10-211ENST00000491627 WRNQ14191 1432 aaPredicted RBP eCLIP15.04■□□□□ -0
NEK10-211ENST00000491627 SMARCA2P51531 1590 aa15.04■□□□□ -0
NEK10-211ENST00000491627 EIF4G1Q04637 1599 aaKnown RBP15.01□□□□□ -0.01
NEK10-211ENST00000491627 TRIM26Q12899 539 aaPredicted RBP15□□□□□ -0.01
NEK10-211ENST00000491627 RUSC2Q8N2Y8 1516 aa14.96□□□□□ -0.01
NEK10-211ENST00000491627 P3H3Q8IVL6 736 aa14.94□□□□□ -0.02
NEK10-211ENST00000491627 HNRNPUL2Q1KMD3 747 aaKnown RBP14.87□□□□□ -0.03
NEK10-211ENST00000491627 ITGAEP38570 1179 aa14.86□□□□□ -0.03
NEK10-211ENST00000491627 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.83□□□□□ -0.04
NEK10-211ENST00000491627 CCER1Q8TC90 406 aaPredicted RBP14.83□□□□□ -0.04
NEK10-211ENST00000491627 NCAPD3P42695 1498 aa14.81□□□□□ -0.04
NEK10-211ENST00000491627 CC2D2AQ9P2K1 1620 aa14.81□□□□□ -0.04
NEK10-211ENST00000491627 FBLN2P98095 1184 aa14.81□□□□□ -0.04
NEK10-211ENST00000491627 ARID3CA6NKF2 412 aa14.8□□□□□ -0.04
NEK10-211ENST00000491627 HRCP23327 699 aa14.79□□□□□ -0.04
NEK10-211ENST00000491627 NESP48681 1621 aa14.77□□□□□ -0.04
NEK10-211ENST00000491627 CADPSQ9ULU8 1353 aa14.76□□□□□ -0.05
NEK10-211ENST00000491627 CEP162Q5TB80 1403 aa14.76□□□□□ -0.05
NEK10-211ENST00000491627 SYNJ1O43426 1573 aa14.72□□□□□ -0.05
NEK10-211ENST00000491627 CUX2O14529 1486 aa14.69□□□□□ -0.06
NEK10-211ENST00000491627 GOLGA3Q08378 1498 aa14.67□□□□□ -0.06
NEK10-211ENST00000491627 CLIP1P30622 1438 aa14.67□□□□□ -0.06
NEK10-211ENST00000491627 PEG3Q9GZU2 1588 aa14.66□□□□□ -0.06
NEK10-211ENST00000491627 TDRD9Q8NDG6 1382 aaKnown RBP14.66□□□□□ -0.06
NEK10-211ENST00000491627 KIF27Q86VH2 1401 aa14.65□□□□□ -0.06
NEK10-211ENST00000491627 RAPGEF2Q9Y4G8 1499 aa14.64□□□□□ -0.07
NEK10-211ENST00000491627 FANCD2Q9BXW9 1451 aa14.63□□□□□ -0.07
NEK10-211ENST00000491627 TNIKQ9UKE5 1360 aa14.63□□□□□ -0.07
NEK10-211ENST00000491627 EEA1Q15075 1411 aa14.62□□□□□ -0.07
NEK10-211ENST00000491627 HMGXB3Q12766 1538 aa14.61□□□□□ -0.07
NEK10-211ENST00000491627 CFTRP13569 1480 aa14.61□□□□□ -0.07
NEK10-211ENST00000491627 CEP164Q9UPV0 1460 aa14.6□□□□□ -0.07
NEK10-211ENST00000491627 RAD54L2Q9Y4B4 1467 aa14.59□□□□□ -0.07
NEK10-211ENST00000491627 CUX1P39880 1505 aa14.55□□□□□ -0.08
NEK10-211ENST00000491627 FAM50AQ14320 339 aaKnown RBP14.55□□□□□ -0.08
NEK10-211ENST00000491627 ERCC6Q03468 1493 aa14.55□□□□□ -0.08
NEK10-211ENST00000491627 FGD5Q6ZNL6 1462 aa14.54□□□□□ -0.08
NEK10-211ENST00000491627 CARMIL1Q5VZK9 1371 aa14.54□□□□□ -0.08
NEK10-211ENST00000491627 PDS5BQ9NTI5 1447 aa14.5□□□□□ -0.09
NEK10-211ENST00000491627 KANK4Q5T7N3 995 aaPredicted RBP14.47□□□□□ -0.09
NEK10-211ENST00000491627 IGF1RP08069 1367 aa14.44□□□□□ -0.1
NEK10-211ENST00000491627 CHMP7Q8WUX9 453 aaPredicted RBP14.44□□□□□ -0.1
NEK10-211ENST00000491627 TOP2BQ02880 1626 aa14.44□□□□□ -0.1
NEK10-211ENST00000491627 ZEB1P37275 1124 aaPredicted RBP14.42□□□□□ -0.1
NEK10-211ENST00000491627 AQRO60306 1485 aaKnown RBP eCLIP14.38□□□□□ -0.11
NEK10-211ENST00000491627 TOPBP1Q92547 1522 aa14.37□□□□□ -0.11
NEK10-211ENST00000491627 POLA1P09884 1462 aaPredicted RBP14.36□□□□□ -0.11
NEK10-211ENST00000491627 VPS8Q8N3P4 1428 aa14.35□□□□□ -0.11
NEK10-211ENST00000491627 FHOD3Q2V2M9 1422 aa14.33□□□□□ -0.12
NEK10-211ENST00000491627 URB2Q14146 1524 aaKnown RBP14.29□□□□□ -0.12
NEK10-211ENST00000491627 CHIC2Q9UKJ5 165 aa14.29□□□□□ -0.12
NEK10-211ENST00000491627 ZNF777Q9ULD5 760 aaPredicted RBP14.29□□□□□ -0.12
NEK10-211ENST00000491627 NEUROD1Q13562 356 aa14.29□□□□□ -0.12
NEK10-211ENST00000491627 PRXQ9BXM0 1461 aa14.28□□□□□ -0.12
NEK10-211ENST00000491627 GAPVD1Q14C86 1478 aa14.27□□□□□ -0.12
NEK10-211ENST00000491627 ARAP1Q96P48 1450 aa14.26□□□□□ -0.13
NEK10-211ENST00000491627 MTUS2Q5JR59 1369 aa14.25□□□□□ -0.13
NEK10-211ENST00000491627 KIF21BO75037 1637 aa14.24□□□□□ -0.13
NEK10-211ENST00000491627 BIVM-ERCC5R4GMW8 1640 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms