RNA–Protein interactions for RNA: ENST00000491160.1

PBX3-208, Transcript of PBX homeobox 3, humanhuman

TSL 5

Gene PBX3, Length 679 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-208ENST00000491160 AEBP2Q6ZN18 517 aaPredicted RBP20.68■□□□□ 0.9
PBX3-208ENST00000491160 CHIC1Q5VXU3 224 aa19.53■□□□□ 0.72
PBX3-208ENST00000491160 SENP3Q9H4L4 574 aaPredicted RBP17.86■□□□□ 0.45
PBX3-208ENST00000491160 PHF23Q9BUL5 403 aaPredicted RBP17.52■□□□□ 0.4
PBX3-208ENST00000491160 NISCHQ9Y2I1 1504 aa16.6■□□□□ 0.25
PBX3-208ENST00000491160 FOXD1Q16676 465 aa16.57■□□□□ 0.24
PBX3-208ENST00000491160 MSH5O43196 834 aa15.75■□□□□ 0.11
PBX3-208ENST00000491160 POTEDQ86YR6 584 aa15.7■□□□□ 0.1
PBX3-208ENST00000491160 PLPPR3Q6T4P5 718 aa15.52■□□□□ 0.08
PBX3-208ENST00000491160 PIAS4Q8N2W9 510 aaPredicted RBP15.48■□□□□ 0.07
PBX3-208ENST00000491160 ABCC9O60706 1549 aa15.33■□□□□ 0.05
PBX3-208ENST00000491160 PPP6R1Q9UPN7 881 aa15.22■□□□□ 0.03
PBX3-208ENST00000491160 ADRA2BP18089 450 aa15.19■□□□□ 0.02
PBX3-208ENST00000491160 CCDC180Q9P1Z9 1646 aa14.97□□□□□ -0.01
PBX3-208ENST00000491160 DNAJC5BQ9UF47 199 aa14.68□□□□□ -0.06
PBX3-208ENST00000491160 RB1CC1Q8TDY2 1594 aa14.41□□□□□ -0.1
PBX3-208ENST00000491160 PABPN1Q86U42 306 aaKnown RBP eCLIP14.28□□□□□ -0.12
PBX3-208ENST00000491160 DCAF8L2P0C7V8 631 aa14.24□□□□□ -0.13
PBX3-208ENST00000491160 NACADO15069 1562 aa14.22□□□□□ -0.13
PBX3-208ENST00000491160 UNC13AQ9UPW8 1703 aa14.15□□□□□ -0.14
PBX3-208ENST00000491160 SCAF1Q9H7N4 1312 aaKnown RBP14.1□□□□□ -0.15
PBX3-208ENST00000491160 DMRT2Q9Y5R5 561 aa14.08□□□□□ -0.16
PBX3-208ENST00000491160 BICRAQ9NZM4 1560 aa14.04□□□□□ -0.16
PBX3-208ENST00000491160 MAPK8IP2Q13387 824 aaPredicted RBP14□□□□□ -0.17
PBX3-208ENST00000491160 MYO15BQ96JP2 1530 aa13.89□□□□□ -0.19
PBX3-208ENST00000491160 CC2D2AQ9P2K1 1620 aa13.82□□□□□ -0.2
PBX3-208ENST00000491160 CECR2Q9BXF3 1484 aa13.81□□□□□ -0.2
PBX3-208ENST00000491160 SCRIBQ14160 1630 aa13.71□□□□□ -0.22
PBX3-208ENST00000491160 EIF4G1Q04637 1599 aaKnown RBP13.71□□□□□ -0.22
PBX3-208ENST00000491160 SHROOM4Q9ULL8 1493 aa13.7□□□□□ -0.22
PBX3-208ENST00000491160 ZCCHC6Q5VYS8 1495 aaKnown RBP13.67□□□□□ -0.22
PBX3-208ENST00000491160 CACNB1Q02641 598 aaPredicted RBP13.63□□□□□ -0.23
PBX3-208ENST00000491160 DCAF1Q9Y4B6 1507 aa13.63□□□□□ -0.23
PBX3-208ENST00000491160 DNAJC5Q9H3Z4 198 aa13.62□□□□□ -0.23
PBX3-208ENST00000491160 DCAF8L1A6NGE4 600 aa13.54□□□□□ -0.24
PBX3-208ENST00000491160 PPP4R3CPQ6ZMV5 832 aa13.51□□□□□ -0.25
PBX3-208ENST00000491160 HOXD11P31277 338 aaPredicted RBP13.45□□□□□ -0.26
PBX3-208ENST00000491160 CNKSR2Q8WXI2 1034 aa13.37□□□□□ -0.27
PBX3-208ENST00000491160 RNF39Q9H2S5 420 aa13.33□□□□□ -0.28
PBX3-208ENST00000491160 RNF216Q9NWF9 866 aaPredicted RBP13.31□□□□□ -0.28
PBX3-208ENST00000491160 CUX2O14529 1486 aa13.25□□□□□ -0.29
PBX3-208ENST00000491160 ERCC6Q03468 1493 aa13.23□□□□□ -0.29
PBX3-208ENST00000491160 C1QBPQ07021 282 aaKnown RBP13.19□□□□□ -0.3
PBX3-208ENST00000491160 NCAPD3P42695 1498 aa13.15□□□□□ -0.3
PBX3-208ENST00000491160 NESP48681 1621 aa13.1□□□□□ -0.31
PBX3-208ENST00000491160 ATAD2BQ9ULI0 1458 aa13.09□□□□□ -0.31
PBX3-208ENST00000491160 NCBP3Q53F19 620 aaKnown RBP13.03□□□□□ -0.32
PBX3-208ENST00000491160 SMARCA2P51531 1590 aa13.01□□□□□ -0.33
PBX3-208ENST00000491160 SMARCA4P51532 1647 aa13.01□□□□□ -0.33
PBX3-208ENST00000491160 HMGXB3Q12766 1538 aa13□□□□□ -0.33
PBX3-208ENST00000491160 THOC2Q8NI27 1593 aaKnown RBP12.98□□□□□ -0.33
PBX3-208ENST00000491160 TRIM41Q8WV44 630 aa12.97□□□□□ -0.33
PBX3-208ENST00000491160 BAZ1BQ9UIG0 1483 aaKnown RBP12.95□□□□□ -0.34
PBX3-208ENST00000491160 KIF21AQ7Z4S6 1674 aa12.92□□□□□ -0.34
PBX3-208ENST00000491160 LAMC3Q9Y6N6 1575 aa12.9□□□□□ -0.35
PBX3-208ENST00000491160 BAZ1AQ9NRL2 1556 aaPredicted RBP12.88□□□□□ -0.35
PBX3-208ENST00000491160 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.86□□□□□ -0.35
PBX3-208ENST00000491160 PDS5BQ9NTI5 1447 aa12.84□□□□□ -0.35
PBX3-208ENST00000491160 PEG3Q9GZU2 1588 aa12.84□□□□□ -0.35
PBX3-208ENST00000491160 MROH2BQ7Z745 1585 aa12.81□□□□□ -0.36
PBX3-208ENST00000491160 CADPSQ9ULU8 1353 aa12.76□□□□□ -0.37
PBX3-208ENST00000491160 MRC2Q9UBG0 1479 aa12.75□□□□□ -0.37
PBX3-208ENST00000491160 WDR62O43379 1518 aa12.72□□□□□ -0.37
PBX3-208ENST00000491160 NPM3O75607 178 aaKnown RBP12.7□□□□□ -0.38
PBX3-208ENST00000491160 WIZO95785 1651 aa12.67□□□□□ -0.38
PBX3-208ENST00000491160 OSCARQ8IYS5 282 aa12.66□□□□□ -0.38
PBX3-208ENST00000491160 CEP164Q9UPV0 1460 aa12.64□□□□□ -0.39
PBX3-208ENST00000491160 FANCD2Q9BXW9 1451 aa12.62□□□□□ -0.39
PBX3-208ENST00000491160 CFTRP13569 1480 aa12.54□□□□□ -0.4
PBX3-208ENST00000491160 URB2Q14146 1524 aaKnown RBP12.54□□□□□ -0.4
PBX3-208ENST00000491160 RIMBP3CA6NJZ7 1639 aa12.53□□□□□ -0.4
PBX3-208ENST00000491160 RIMBP3BA6NNM3 1639 aa12.53□□□□□ -0.4
PBX3-208ENST00000491160 RIMBP3Q9UFD9 1639 aa12.53□□□□□ -0.4
PBX3-208ENST00000491160 U3KPZ7 1027 aaPredicted RBP12.48□□□□□ -0.41
PBX3-208ENST00000491160 ZNF608Q9ULD9 1512 aaPredicted RBP12.46□□□□□ -0.42
PBX3-208ENST00000491160 ARHGEF11O15085 1522 aa12.44□□□□□ -0.42
PBX3-208ENST00000491160 CAPN15O75808 1086 aa12.44□□□□□ -0.42
PBX3-208ENST00000491160 RSF1Q96T23 1441 aaPredicted RBP12.44□□□□□ -0.42
PBX3-208ENST00000491160 TOP2AP11388 1531 aaKnown RBP12.42□□□□□ -0.42
PBX3-208ENST00000491160 CYB5RLQ6IPT4 315 aa12.42□□□□□ -0.42
PBX3-208ENST00000491160 IFT140Q96RY7 1462 aa12.4□□□□□ -0.43
PBX3-208ENST00000491160 PRDM2Q13029 1718 aa12.4□□□□□ -0.43
PBX3-208ENST00000491160 TRHP20396 242 aaPredicted RBP12.38□□□□□ -0.43
PBX3-208ENST00000491160 DSG3P32926 999 aa12.37□□□□□ -0.43
PBX3-208ENST00000491160 SPINK5Q9NQ38 1064 aaPredicted RBP12.35□□□□□ -0.43
PBX3-208ENST00000491160 EIF4G3O43432 1585 aaKnown RBP12.35□□□□□ -0.43
PBX3-208ENST00000491160 TOPBP1Q92547 1522 aa12.34□□□□□ -0.43
PBX3-208ENST00000491160 CCDC88BA6NC98 1476 aa12.34□□□□□ -0.43
PBX3-208ENST00000491160 APLP2Q06481 763 aa12.33□□□□□ -0.44
PBX3-208ENST00000491160 CHD1O14646 1710 aa12.33□□□□□ -0.44
PBX3-208ENST00000491160 FBLN2P98095 1184 aa12.32□□□□□ -0.44
PBX3-208ENST00000491160 AQRO60306 1485 aaKnown RBP eCLIP12.32□□□□□ -0.44
PBX3-208ENST00000491160 ARAP1Q96P48 1450 aa12.31□□□□□ -0.44
PBX3-208ENST00000491160 POTEHQ6S545 545 aa12.29□□□□□ -0.44
PBX3-208ENST00000491160 DNMBPQ6XZF7 1577 aa12.26□□□□□ -0.45
PBX3-208ENST00000491160 TARBP1Q13395 1621 aaKnown RBP12.26□□□□□ -0.45
PBX3-208ENST00000491160 ABCC8Q09428 1581 aa12.25□□□□□ -0.45
PBX3-208ENST00000491160 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.21□□□□□ -0.45
PBX3-208ENST00000491160 HNRNPUL2Q1KMD3 747 aaKnown RBP12.21□□□□□ -0.45
PBX3-208ENST00000491160 POLA1P09884 1462 aaPredicted RBP12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms