RNA–Protein interactions for RNA: ENST00000490456.6

SKAP2-207, Transcript of src kinase associated phosphoprotein 2, humanhuman

TSL 4

Gene SKAP2, Length 558 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKAP2-207ENST00000490456 AEBP2Q6ZN18 517 aaPredicted RBP26.54■■□□□ 1.84
SKAP2-207ENST00000490456 CHIC1Q5VXU3 224 aa25.06■■□□□ 1.6
SKAP2-207ENST00000490456 SENP3Q9H4L4 574 aaPredicted RBP22.91■■□□□ 1.26
SKAP2-207ENST00000490456 PHF23Q9BUL5 403 aaPredicted RBP22.49■■□□□ 1.19
SKAP2-207ENST00000490456 NISCHQ9Y2I1 1504 aa21.71■■□□□ 1.07
SKAP2-207ENST00000490456 FOXD1Q16676 465 aa21.26■□□□□ 0.99
SKAP2-207ENST00000490456 MSH5O43196 834 aa20.2■□□□□ 0.82
SKAP2-207ENST00000490456 POTEDQ86YR6 584 aa20.17■□□□□ 0.82
SKAP2-207ENST00000490456 ABCC9O60706 1549 aa20.11■□□□□ 0.81
SKAP2-207ENST00000490456 PLPPR3Q6T4P5 718 aa19.89■□□□□ 0.77
SKAP2-207ENST00000490456 PIAS4Q8N2W9 510 aaPredicted RBP19.89■□□□□ 0.77
SKAP2-207ENST00000490456 CCDC180Q9P1Z9 1646 aa19.8■□□□□ 0.76
SKAP2-207ENST00000490456 PPP6R1Q9UPN7 881 aa19.54■□□□□ 0.72
SKAP2-207ENST00000490456 ADRA2BP18089 450 aa19.53■□□□□ 0.72
SKAP2-207ENST00000490456 DNAJC5BQ9UF47 199 aa19.19■□□□□ 0.66
SKAP2-207ENST00000490456 RB1CC1Q8TDY2 1594 aa19.02■□□□□ 0.64
SKAP2-207ENST00000490456 NACADO15069 1562 aa18.76■□□□□ 0.59
SKAP2-207ENST00000490456 UNC13AQ9UPW8 1703 aa18.62■□□□□ 0.57
SKAP2-207ENST00000490456 PABPN1Q86U42 306 aaKnown RBP eCLIP18.57■□□□□ 0.56
SKAP2-207ENST00000490456 BICRAQ9NZM4 1560 aa18.44■□□□□ 0.54
SKAP2-207ENST00000490456 DCAF8L2P0C7V8 631 aa18.42■□□□□ 0.54
SKAP2-207ENST00000490456 MYO15BQ96JP2 1530 aa18.37■□□□□ 0.53
SKAP2-207ENST00000490456 SHROOM4Q9ULL8 1493 aa18.23■□□□□ 0.51
SKAP2-207ENST00000490456 CC2D2AQ9P2K1 1620 aa18.19■□□□□ 0.5
SKAP2-207ENST00000490456 CECR2Q9BXF3 1484 aa18.18■□□□□ 0.5
SKAP2-207ENST00000490456 SCAF1Q9H7N4 1312 aaKnown RBP18.09■□□□□ 0.49
SKAP2-207ENST00000490456 DMRT2Q9Y5R5 561 aa18.04■□□□□ 0.48
SKAP2-207ENST00000490456 EIF4G1Q04637 1599 aaKnown RBP18.04■□□□□ 0.48
SKAP2-207ENST00000490456 DNAJC5Q9H3Z4 198 aa18.03■□□□□ 0.48
SKAP2-207ENST00000490456 MAPK8IP2Q13387 824 aaPredicted RBP18■□□□□ 0.47
SKAP2-207ENST00000490456 DCAF1Q9Y4B6 1507 aa17.96■□□□□ 0.47
SKAP2-207ENST00000490456 SCRIBQ14160 1630 aa17.91■□□□□ 0.46
SKAP2-207ENST00000490456 ZCCHC6Q5VYS8 1495 aaKnown RBP17.9■□□□□ 0.46
SKAP2-207ENST00000490456 CUX2O14529 1486 aa17.59■□□□□ 0.41
SKAP2-207ENST00000490456 CACNB1Q02641 598 aaPredicted RBP17.56■□□□□ 0.4
SKAP2-207ENST00000490456 DCAF8L1A6NGE4 600 aa17.46■□□□□ 0.39
SKAP2-207ENST00000490456 ERCC6Q03468 1493 aa17.43■□□□□ 0.38
SKAP2-207ENST00000490456 PPP4R3CPQ6ZMV5 832 aa17.34■□□□□ 0.37
SKAP2-207ENST00000490456 NCAPD3P42695 1498 aa17.29■□□□□ 0.36
SKAP2-207ENST00000490456 HOXD11P31277 338 aaPredicted RBP17.22■□□□□ 0.35
SKAP2-207ENST00000490456 HMGXB3Q12766 1538 aa17.17■□□□□ 0.34
SKAP2-207ENST00000490456 ATAD2BQ9ULI0 1458 aa17.16■□□□□ 0.34
SKAP2-207ENST00000490456 SMARCA2P51531 1590 aa17.15■□□□□ 0.34
SKAP2-207ENST00000490456 CNKSR2Q8WXI2 1034 aa17.14■□□□□ 0.33
SKAP2-207ENST00000490456 THOC2Q8NI27 1593 aaKnown RBP17.13■□□□□ 0.33
SKAP2-207ENST00000490456 NESP48681 1621 aa17.13■□□□□ 0.33
SKAP2-207ENST00000490456 RNF39Q9H2S5 420 aa17.09■□□□□ 0.33
SKAP2-207ENST00000490456 SMARCA4P51532 1647 aa17.07■□□□□ 0.32
SKAP2-207ENST00000490456 RNF216Q9NWF9 866 aaPredicted RBP17.05■□□□□ 0.32
SKAP2-207ENST00000490456 LAMC3Q9Y6N6 1575 aa17.03■□□□□ 0.32
SKAP2-207ENST00000490456 TRIM41Q8WV44 630 aa17.01■□□□□ 0.31
SKAP2-207ENST00000490456 BAZ1BQ9UIG0 1483 aaKnown RBP16.99■□□□□ 0.31
SKAP2-207ENST00000490456 KIF21AQ7Z4S6 1674 aa16.98■□□□□ 0.31
SKAP2-207ENST00000490456 PEG3Q9GZU2 1588 aa16.93■□□□□ 0.3
SKAP2-207ENST00000490456 BAZ1AQ9NRL2 1556 aaPredicted RBP16.93■□□□□ 0.3
SKAP2-207ENST00000490456 C1QBPQ07021 282 aaKnown RBP16.91■□□□□ 0.3
SKAP2-207ENST00000490456 PDS5BQ9NTI5 1447 aa16.9■□□□□ 0.3
SKAP2-207ENST00000490456 MRC2Q9UBG0 1479 aa16.79■□□□□ 0.28
SKAP2-207ENST00000490456 WDR62O43379 1518 aa16.78■□□□□ 0.28
SKAP2-207ENST00000490456 NCBP3Q53F19 620 aaKnown RBP16.72■□□□□ 0.27
SKAP2-207ENST00000490456 CADPSQ9ULU8 1353 aa16.72■□□□□ 0.27
SKAP2-207ENST00000490456 MROH2BQ7Z745 1585 aa16.69■□□□□ 0.26
SKAP2-207ENST00000490456 OSCARQ8IYS5 282 aa16.64■□□□□ 0.25
SKAP2-207ENST00000490456 CEP164Q9UPV0 1460 aa16.64■□□□□ 0.25
SKAP2-207ENST00000490456 FANCD2Q9BXW9 1451 aa16.55■□□□□ 0.24
SKAP2-207ENST00000490456 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.55■□□□□ 0.24
SKAP2-207ENST00000490456 RIMBP3CA6NJZ7 1639 aa16.53■□□□□ 0.24
SKAP2-207ENST00000490456 RIMBP3BA6NNM3 1639 aa16.53■□□□□ 0.24
SKAP2-207ENST00000490456 RIMBP3Q9UFD9 1639 aa16.53■□□□□ 0.24
SKAP2-207ENST00000490456 WIZO95785 1651 aa16.5■□□□□ 0.23
SKAP2-207ENST00000490456 CFTRP13569 1480 aa16.45■□□□□ 0.22
SKAP2-207ENST00000490456 URB2Q14146 1524 aaKnown RBP16.44■□□□□ 0.22
SKAP2-207ENST00000490456 ARHGEF11O15085 1522 aa16.42■□□□□ 0.22
SKAP2-207ENST00000490456 PRDM2Q13029 1718 aa16.38■□□□□ 0.21
SKAP2-207ENST00000490456 IFT140Q96RY7 1462 aa16.31■□□□□ 0.2
SKAP2-207ENST00000490456 TOP2AP11388 1531 aaKnown RBP16.28■□□□□ 0.2
SKAP2-207ENST00000490456 ZNF608Q9ULD9 1512 aaPredicted RBP16.28■□□□□ 0.2
SKAP2-207ENST00000490456 NPM3O75607 178 aaKnown RBP16.27■□□□□ 0.2
SKAP2-207ENST00000490456 CYB5RLQ6IPT4 315 aa16.25■□□□□ 0.19
SKAP2-207ENST00000490456 EIF4G3O43432 1585 aaKnown RBP16.25■□□□□ 0.19
SKAP2-207ENST00000490456 TRHP20396 242 aaPredicted RBP16.24■□□□□ 0.19
SKAP2-207ENST00000490456 CHD1O14646 1710 aa16.23■□□□□ 0.19
SKAP2-207ENST00000490456 ARAP1Q96P48 1450 aa16.21■□□□□ 0.19
SKAP2-207ENST00000490456 TOPBP1Q92547 1522 aa16.19■□□□□ 0.18
SKAP2-207ENST00000490456 RSF1Q96T23 1441 aaPredicted RBP16.18■□□□□ 0.18
SKAP2-207ENST00000490456 ABCC8Q09428 1581 aa16.17■□□□□ 0.18
SKAP2-207ENST00000490456 DNMBPQ6XZF7 1577 aa16.12■□□□□ 0.17
SKAP2-207ENST00000490456 TARBP1Q13395 1621 aaKnown RBP16.11■□□□□ 0.17
SKAP2-207ENST00000490456 AQRO60306 1485 aaKnown RBP eCLIP16.07■□□□□ 0.16
SKAP2-207ENST00000490456 CCDC88BA6NC98 1476 aa16.05■□□□□ 0.16
SKAP2-207ENST00000490456 FBLN2P98095 1184 aa16.04■□□□□ 0.16
SKAP2-207ENST00000490456 CAPN15O75808 1086 aa16.02■□□□□ 0.16
SKAP2-207ENST00000490456 CLASP1Q7Z460 1538 aa16■□□□□ 0.15
SKAP2-207ENST00000490456 U3KPZ7 1027 aaPredicted RBP16■□□□□ 0.15
SKAP2-207ENST00000490456 POLA1P09884 1462 aaPredicted RBP15.99■□□□□ 0.15
SKAP2-207ENST00000490456 WDR97A6NE52 1622 aa15.98■□□□□ 0.15
SKAP2-207ENST00000490456 SYNJ1O43426 1573 aa15.98■□□□□ 0.15
SKAP2-207ENST00000490456 SNAPC4Q5SXM2 1469 aa15.93■□□□□ 0.14
SKAP2-207ENST00000490456 MAGI1Q96QZ7 1491 aaPredicted RBP15.91■□□□□ 0.14
SKAP2-207ENST00000490456 RAD54L2Q9Y4B4 1467 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 107 ms