RNA–Protein interactions for RNA: ENST00000489094.1

GTF2IRD1-207, Transcript of GTF2I repeat domain containing 1, humanhuman

TSL 5

Gene GTF2IRD1, Length 2,274 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IRD1-207ENST00000489094 NISCHQ9Y2I1 1504 aa35.6■■■■□ 3.29
GTF2IRD1-207ENST00000489094 CCDC180Q9P1Z9 1646 aa30.34■■■□□ 2.45
GTF2IRD1-207ENST00000489094 SHROOM4Q9ULL8 1493 aa30.14■■■□□ 2.42
GTF2IRD1-207ENST00000489094 ZCCHC6Q5VYS8 1495 aaKnown RBP30.07■■■□□ 2.4
GTF2IRD1-207ENST00000489094 DCAF8L2P0C7V8 631 aa29.54■■■□□ 2.32
GTF2IRD1-207ENST00000489094 SUPT5HO00267 1087 aaKnown RBP29.46■■■□□ 2.31
GTF2IRD1-207ENST00000489094 DCAF1Q9Y4B6 1507 aa29.23■■■□□ 2.27
GTF2IRD1-207ENST00000489094 CHIC1Q5VXU3 224 aa28.57■■■□□ 2.16
GTF2IRD1-207ENST00000489094 MYO15BQ96JP2 1530 aa28.48■■■□□ 2.15
GTF2IRD1-207ENST00000489094 SCRIBQ14160 1630 aa28.38■■■□□ 2.13
GTF2IRD1-207ENST00000489094 ABCC9O60706 1549 aa28.3■■■□□ 2.12
GTF2IRD1-207ENST00000489094 NACADO15069 1562 aa28.14■■■□□ 2.09
GTF2IRD1-207ENST00000489094 RSF1Q96T23 1441 aaPredicted RBP28.1■■■□□ 2.09
GTF2IRD1-207ENST00000489094 CECR2Q9BXF3 1484 aa27.78■■■□□ 2.04
GTF2IRD1-207ENST00000489094 RB1CC1Q8TDY2 1594 aa27.72■■■□□ 2.03
GTF2IRD1-207ENST00000489094 LOC105371045A0A1W2PR82 267 aa27.7■■■□□ 2.02
GTF2IRD1-207ENST00000489094 MROH2BQ7Z745 1585 aa27.66■■■□□ 2.02
GTF2IRD1-207ENST00000489094 TRIM41Q8WV44 630 aa27.48■■□□□ 1.99
GTF2IRD1-207ENST00000489094 WIZO95785 1651 aa27.46■■□□□ 1.99
GTF2IRD1-207ENST00000489094 PCGF6Q9BYE7 350 aa27.41■■□□□ 1.98
GTF2IRD1-207ENST00000489094 HRCP23327 699 aa27.37■■□□□ 1.97
GTF2IRD1-207ENST00000489094 BAZ1AQ9NRL2 1556 aaPredicted RBP27.35■■□□□ 1.97
GTF2IRD1-207ENST00000489094 UNC13AQ9UPW8 1703 aa27.22■■□□□ 1.95
GTF2IRD1-207ENST00000489094 FAM9AQ8IZU1 332 aaPredicted RBP27.21■■□□□ 1.95
GTF2IRD1-207ENST00000489094 SMARCA4P51532 1647 aa27.14■■□□□ 1.93
GTF2IRD1-207ENST00000489094 TOP2AP11388 1531 aaKnown RBP27.06■■□□□ 1.92
GTF2IRD1-207ENST00000489094 PABPN1Q86U42 306 aaKnown RBP eCLIP27.04■■□□□ 1.92
GTF2IRD1-207ENST00000489094 EIF4G1Q04637 1599 aaKnown RBP27.02■■□□□ 1.92
GTF2IRD1-207ENST00000489094 TRIM26Q12899 539 aaPredicted RBP26.97■■□□□ 1.91
GTF2IRD1-207ENST00000489094 BICRAQ9NZM4 1560 aa26.97■■□□□ 1.91
GTF2IRD1-207ENST00000489094 CCDC88BA6NC98 1476 aa26.96■■□□□ 1.91
GTF2IRD1-207ENST00000489094 EHMT2Q96KQ7 1210 aa26.96■■□□□ 1.91
GTF2IRD1-207ENST00000489094 SMARCA2P51531 1590 aa26.9■■□□□ 1.9
GTF2IRD1-207ENST00000489094 ABCC8Q09428 1581 aa26.77■■□□□ 1.88
GTF2IRD1-207ENST00000489094 PPARGC1BQ86YN6 1023 aaKnown RBP26.72■■□□□ 1.87
GTF2IRD1-207ENST00000489094 PEG3Q9GZU2 1588 aa26.65■■□□□ 1.86
GTF2IRD1-207ENST00000489094 ATAD2BQ9ULI0 1458 aa26.53■■□□□ 1.84
GTF2IRD1-207ENST00000489094 SOGA1O94964 1423 aa26.51■■□□□ 1.83
GTF2IRD1-207ENST00000489094 BAZ1BQ9UIG0 1483 aaKnown RBP26.42■■□□□ 1.82
GTF2IRD1-207ENST00000489094 WRNQ14191 1432 aaPredicted RBP eCLIP26.39■■□□□ 1.81
GTF2IRD1-207ENST00000489094 RUSC2Q8N2Y8 1516 aa26.38■■□□□ 1.81
GTF2IRD1-207ENST00000489094 CSRNP3Q8WYN3 585 aa26.35■■□□□ 1.81
GTF2IRD1-207ENST00000489094 EEA1Q15075 1411 aa26.34■■□□□ 1.81
GTF2IRD1-207ENST00000489094 ZEB1P37275 1124 aaPredicted RBP26.28■■□□□ 1.8
GTF2IRD1-207ENST00000489094 TNIKQ9UKE5 1360 aa26.28■■□□□ 1.8
GTF2IRD1-207ENST00000489094 CEP162Q5TB80 1403 aa26.27■■□□□ 1.8
GTF2IRD1-207ENST00000489094 SYNJ1O43426 1573 aa26.24■■□□□ 1.79
GTF2IRD1-207ENST00000489094 UBTFP17480 764 aaKnown RBP26.19■■□□□ 1.78
GTF2IRD1-207ENST00000489094 GOLGA3Q08378 1498 aa26.14■■□□□ 1.78
GTF2IRD1-207ENST00000489094 NCAPD3P42695 1498 aa26.06■■□□□ 1.76
GTF2IRD1-207ENST00000489094 TTBK1Q5TCY1 1321 aaPredicted RBP26.03■■□□□ 1.76
GTF2IRD1-207ENST00000489094 CEP164Q9UPV0 1460 aa26.02■■□□□ 1.76
GTF2IRD1-207ENST00000489094 HMGXB3Q12766 1538 aa26.01■■□□□ 1.76
GTF2IRD1-207ENST00000489094 KIF21BO75037 1637 aa25.97■■□□□ 1.75
GTF2IRD1-207ENST00000489094 TOP2BQ02880 1626 aa25.95■■□□□ 1.74
GTF2IRD1-207ENST00000489094 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.93■■□□□ 1.74
GTF2IRD1-207ENST00000489094 RAPGEF2Q9Y4G8 1499 aa25.87■■□□□ 1.73
GTF2IRD1-207ENST00000489094 BIVM-ERCC5R4GMW8 1640 aa25.85■■□□□ 1.73
GTF2IRD1-207ENST00000489094 CCER1Q8TC90 406 aaPredicted RBP25.84■■□□□ 1.73
GTF2IRD1-207ENST00000489094 CLIP1P30622 1438 aa25.83■■□□□ 1.73
GTF2IRD1-207ENST00000489094 CFTRP13569 1480 aa25.79■■□□□ 1.72
GTF2IRD1-207ENST00000489094 CUX1P39880 1505 aa25.76■■□□□ 1.71
GTF2IRD1-207ENST00000489094 RANGAP1P46060 587 aaPredicted RBP25.71■■□□□ 1.71
GTF2IRD1-207ENST00000489094 VPS8Q8N3P4 1428 aa25.69■■□□□ 1.7
GTF2IRD1-207ENST00000489094 PRXQ9BXM0 1461 aa25.67■■□□□ 1.7
GTF2IRD1-207ENST00000489094 ERICH3Q5RHP9 1530 aa25.61■■□□□ 1.69
GTF2IRD1-207ENST00000489094 KIF27Q86VH2 1401 aa25.59■■□□□ 1.69
GTF2IRD1-207ENST00000489094 APLP2Q06481 763 aa25.55■■□□□ 1.68
GTF2IRD1-207ENST00000489094 CADPSQ9ULU8 1353 aa25.55■■□□□ 1.68
GTF2IRD1-207ENST00000489094 CC2D2AQ9P2K1 1620 aa25.48■■□□□ 1.67
GTF2IRD1-207ENST00000489094 HNRNPUL2Q1KMD3 747 aaKnown RBP25.47■■□□□ 1.67
GTF2IRD1-207ENST00000489094 PRDM2Q13029 1718 aa25.46■■□□□ 1.67
GTF2IRD1-207ENST00000489094 ARAP1Q96P48 1450 aa25.45■■□□□ 1.67
GTF2IRD1-207ENST00000489094 CUX2O14529 1486 aa25.39■■□□□ 1.66
GTF2IRD1-207ENST00000489094 IGF1RP08069 1367 aa25.37■■□□□ 1.65
GTF2IRD1-207ENST00000489094 FGD5Q6ZNL6 1462 aa25.34■■□□□ 1.65
GTF2IRD1-207ENST00000489094 KANK4Q5T7N3 995 aaPredicted RBP25.3■■□□□ 1.64
GTF2IRD1-207ENST00000489094 FANCD2Q9BXW9 1451 aa25.28■■□□□ 1.64
GTF2IRD1-207ENST00000489094 ARHGAP35Q9NRY4 1499 aa25.28■■□□□ 1.64
GTF2IRD1-207ENST00000489094 CARMIL1Q5VZK9 1371 aa25.24■■□□□ 1.63
GTF2IRD1-207ENST00000489094 DIEXFQ68CQ4 756 aaKnown RBP25.19■■□□□ 1.62
GTF2IRD1-207ENST00000489094 SCAF1Q9H7N4 1312 aaKnown RBP25.16■■□□□ 1.62
GTF2IRD1-207ENST00000489094 NESP48681 1621 aa25.16■■□□□ 1.62
GTF2IRD1-207ENST00000489094 RAD54L2Q9Y4B4 1467 aa25.11■■□□□ 1.61
GTF2IRD1-207ENST00000489094 DNMBPQ6XZF7 1577 aa25.11■■□□□ 1.61
GTF2IRD1-207ENST00000489094 ZNF316A6NFI3 1004 aaPredicted RBP25.1■■□□□ 1.61
GTF2IRD1-207ENST00000489094 TOPBP1Q92547 1522 aa25.09■■□□□ 1.61
GTF2IRD1-207ENST00000489094 RRBP1Q9P2E9 1410 aaKnown RBP25.07■■□□□ 1.6
GTF2IRD1-207ENST00000489094 POLA1P09884 1462 aaPredicted RBP25.07■■□□□ 1.6
GTF2IRD1-207ENST00000489094 ABCA10Q8WWZ4 1543 aa25.05■■□□□ 1.6
GTF2IRD1-207ENST00000489094 CCNB3Q8WWL7 1395 aa24.98■■□□□ 1.59
GTF2IRD1-207ENST00000489094 ACIN1Q9UKV3 1341 aaKnown RBP24.97■■□□□ 1.59
GTF2IRD1-207ENST00000489094 DHX57Q6P158 1386 aaKnown RBP24.97■■□□□ 1.59
GTF2IRD1-207ENST00000489094 P3H3Q8IVL6 736 aa24.95■■□□□ 1.58
GTF2IRD1-207ENST00000489094 DNAJC5BQ9UF47 199 aa24.95■■□□□ 1.58
GTF2IRD1-207ENST00000489094 LAMC3Q9Y6N6 1575 aa24.94■■□□□ 1.58
GTF2IRD1-207ENST00000489094 TIAM1Q13009 1591 aa24.93■■□□□ 1.58
GTF2IRD1-207ENST00000489094 URB2Q14146 1524 aaKnown RBP24.93■■□□□ 1.58
GTF2IRD1-207ENST00000489094 MAP3K1Q13233 1512 aa24.93■■□□□ 1.58
GTF2IRD1-207ENST00000489094 CLSPNQ9HAW4 1339 aa24.9■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms