RNA–Protein interactions for RNA: ENST00000488737.6

ABCB1-207, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 1 (best)

Gene ABCB1, Length 1,864 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-207ENST00000488737 NISCHQ9Y2I1 1504 aa30.1■■■□□ 2.41
ABCB1-207ENST00000488737 CCDC180Q9P1Z9 1646 aa25.87■■□□□ 1.73
ABCB1-207ENST00000488737 ZCCHC6Q5VYS8 1495 aaKnown RBP25.47■■□□□ 1.67
ABCB1-207ENST00000488737 SHROOM4Q9ULL8 1493 aa25.16■■□□□ 1.62
ABCB1-207ENST00000488737 DCAF1Q9Y4B6 1507 aa24.9■■□□□ 1.58
ABCB1-207ENST00000488737 SUPT5HO00267 1087 aaKnown RBP24.62■■□□□ 1.53
ABCB1-207ENST00000488737 ABCC9O60706 1549 aa24.56■■□□□ 1.52
ABCB1-207ENST00000488737 DCAF8L2P0C7V8 631 aa24.55■■□□□ 1.52
ABCB1-207ENST00000488737 MYO15BQ96JP2 1530 aa24.26■■□□□ 1.47
ABCB1-207ENST00000488737 CHIC1Q5VXU3 224 aa24.04■■□□□ 1.44
ABCB1-207ENST00000488737 SCRIBQ14160 1630 aa23.91■■□□□ 1.42
ABCB1-207ENST00000488737 NACADO15069 1562 aa23.91■■□□□ 1.42
ABCB1-207ENST00000488737 RB1CC1Q8TDY2 1594 aa23.84■■□□□ 1.41
ABCB1-207ENST00000488737 RSF1Q96T23 1441 aaPredicted RBP23.69■■□□□ 1.38
ABCB1-207ENST00000488737 UNC13AQ9UPW8 1703 aa23.52■■□□□ 1.36
ABCB1-207ENST00000488737 CECR2Q9BXF3 1484 aa23.32■■□□□ 1.32
ABCB1-207ENST00000488737 MROH2BQ7Z745 1585 aa23.3■■□□□ 1.32
ABCB1-207ENST00000488737 WIZO95785 1651 aa23.18■■□□□ 1.3
ABCB1-207ENST00000488737 BAZ1AQ9NRL2 1556 aaPredicted RBP23.18■■□□□ 1.3
ABCB1-207ENST00000488737 LOC105371045A0A1W2PR82 267 aa23.14■■□□□ 1.29
ABCB1-207ENST00000488737 BICRAQ9NZM4 1560 aa23.11■■□□□ 1.29
ABCB1-207ENST00000488737 TRIM41Q8WV44 630 aa23.08■■□□□ 1.29
ABCB1-207ENST00000488737 HRCP23327 699 aa23.07■■□□□ 1.28
ABCB1-207ENST00000488737 PABPN1Q86U42 306 aaKnown RBP eCLIP23.04■■□□□ 1.28
ABCB1-207ENST00000488737 PCGF6Q9BYE7 350 aa23■■□□□ 1.27
ABCB1-207ENST00000488737 SMARCA4P51532 1647 aa22.98■■□□□ 1.27
ABCB1-207ENST00000488737 EIF4G1Q04637 1599 aaKnown RBP22.95■■□□□ 1.26
ABCB1-207ENST00000488737 TOP2AP11388 1531 aaKnown RBP22.93■■□□□ 1.26
ABCB1-207ENST00000488737 TRIM26Q12899 539 aaPredicted RBP22.79■■□□□ 1.24
ABCB1-207ENST00000488737 SMARCA2P51531 1590 aa22.76■■□□□ 1.23
ABCB1-207ENST00000488737 CCDC88BA6NC98 1476 aa22.71■■□□□ 1.23
ABCB1-207ENST00000488737 FAM9AQ8IZU1 332 aaPredicted RBP22.69■■□□□ 1.22
ABCB1-207ENST00000488737 PEG3Q9GZU2 1588 aa22.66■■□□□ 1.22
ABCB1-207ENST00000488737 ABCC8Q09428 1581 aa22.53■■□□□ 1.2
ABCB1-207ENST00000488737 EEA1Q15075 1411 aa22.41■■□□□ 1.18
ABCB1-207ENST00000488737 PPARGC1BQ86YN6 1023 aaKnown RBP22.37■■□□□ 1.17
ABCB1-207ENST00000488737 ATAD2BQ9ULI0 1458 aa22.36■■□□□ 1.17
ABCB1-207ENST00000488737 ZEB1P37275 1124 aaPredicted RBP22.34■■□□□ 1.17
ABCB1-207ENST00000488737 EHMT2Q96KQ7 1210 aa22.34■■□□□ 1.17
ABCB1-207ENST00000488737 BAZ1BQ9UIG0 1483 aaKnown RBP22.29■■□□□ 1.16
ABCB1-207ENST00000488737 SOGA1O94964 1423 aa22.27■■□□□ 1.16
ABCB1-207ENST00000488737 WRNQ14191 1432 aaPredicted RBP eCLIP22.26■■□□□ 1.15
ABCB1-207ENST00000488737 CC2D2AQ9P2K1 1620 aa22.25■■□□□ 1.15
ABCB1-207ENST00000488737 TNIKQ9UKE5 1360 aa22.23■■□□□ 1.15
ABCB1-207ENST00000488737 CEP162Q5TB80 1403 aa22.18■■□□□ 1.14
ABCB1-207ENST00000488737 CSRNP3Q8WYN3 585 aa22.17■■□□□ 1.14
ABCB1-207ENST00000488737 SYNJ1O43426 1573 aa22.17■■□□□ 1.14
ABCB1-207ENST00000488737 GOLGA3Q08378 1498 aa22.14■■□□□ 1.14
ABCB1-207ENST00000488737 RUSC2Q8N2Y8 1516 aa22.14■■□□□ 1.13
ABCB1-207ENST00000488737 KIF21BO75037 1637 aa22.09■■□□□ 1.13
ABCB1-207ENST00000488737 HMGXB3Q12766 1538 aa22.08■■□□□ 1.13
ABCB1-207ENST00000488737 CEP164Q9UPV0 1460 aa22.05■■□□□ 1.12
ABCB1-207ENST00000488737 NCAPD3P42695 1498 aa22.02■■□□□ 1.12
ABCB1-207ENST00000488737 TOP2BQ02880 1626 aa22.01■■□□□ 1.11
ABCB1-207ENST00000488737 BIVM-ERCC5R4GMW8 1640 aa21.98■■□□□ 1.11
ABCB1-207ENST00000488737 UBTFP17480 764 aaKnown RBP21.97■■□□□ 1.11
ABCB1-207ENST00000488737 DNAJC5BQ9UF47 199 aa21.91■■□□□ 1.1
ABCB1-207ENST00000488737 CLIP1P30622 1438 aa21.81■■□□□ 1.08
ABCB1-207ENST00000488737 PRDM2Q13029 1718 aa21.79■■□□□ 1.08
ABCB1-207ENST00000488737 RAPGEF2Q9Y4G8 1499 aa21.78■■□□□ 1.08
ABCB1-207ENST00000488737 ERICH3Q5RHP9 1530 aa21.78■■□□□ 1.08
ABCB1-207ENST00000488737 CFTRP13569 1480 aa21.78■■□□□ 1.08
ABCB1-207ENST00000488737 VPS8Q8N3P4 1428 aa21.75■■□□□ 1.07
ABCB1-207ENST00000488737 CCER1Q8TC90 406 aaPredicted RBP21.74■■□□□ 1.07
ABCB1-207ENST00000488737 CUX1P39880 1505 aa21.73■■□□□ 1.07
ABCB1-207ENST00000488737 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.73■■□□□ 1.07
ABCB1-207ENST00000488737 PRXQ9BXM0 1461 aa21.7■■□□□ 1.06
ABCB1-207ENST00000488737 TTBK1Q5TCY1 1321 aaPredicted RBP21.63■■□□□ 1.05
ABCB1-207ENST00000488737 KIF27Q86VH2 1401 aa21.62■■□□□ 1.05
ABCB1-207ENST00000488737 APLP2Q06481 763 aa21.52■■□□□ 1.04
ABCB1-207ENST00000488737 CADPSQ9ULU8 1353 aa21.51■■□□□ 1.03
ABCB1-207ENST00000488737 ARAP1Q96P48 1450 aa21.5■■□□□ 1.03
ABCB1-207ENST00000488737 NESP48681 1621 aa21.44■■□□□ 1.02
ABCB1-207ENST00000488737 LAMC3Q9Y6N6 1575 aa21.41■■□□□ 1.02
ABCB1-207ENST00000488737 CUX2O14529 1486 aa21.37■■□□□ 1.01
ABCB1-207ENST00000488737 FGD5Q6ZNL6 1462 aa21.35■■□□□ 1.01
ABCB1-207ENST00000488737 RANGAP1P46060 587 aaPredicted RBP21.35■■□□□ 1.01
ABCB1-207ENST00000488737 IGF1RP08069 1367 aa21.33■■□□□ 1.01
ABCB1-207ENST00000488737 ARHGAP35Q9NRY4 1499 aa21.33■■□□□ 1.01
ABCB1-207ENST00000488737 HNRNPUL2Q1KMD3 747 aaKnown RBP21.32■■□□□ 1
ABCB1-207ENST00000488737 KIF21AQ7Z4S6 1674 aa21.31■■□□□ 1
ABCB1-207ENST00000488737 FANCD2Q9BXW9 1451 aa21.29■■□□□ 1
ABCB1-207ENST00000488737 DNMBPQ6XZF7 1577 aa21.28■■□□□ 1
ABCB1-207ENST00000488737 DIEXFQ68CQ4 756 aaKnown RBP21.26■□□□□ 0.99
ABCB1-207ENST00000488737 RRBP1Q9P2E9 1410 aaKnown RBP21.25■□□□□ 0.99
ABCB1-207ENST00000488737 CARMIL1Q5VZK9 1371 aa21.24■□□□□ 0.99
ABCB1-207ENST00000488737 MAP3K1Q13233 1512 aa21.23■□□□□ 0.99
ABCB1-207ENST00000488737 ZNF316A6NFI3 1004 aaPredicted RBP21.2■□□□□ 0.98
ABCB1-207ENST00000488737 CLSPNQ9HAW4 1339 aa21.2■□□□□ 0.98
ABCB1-207ENST00000488737 PDS5BQ9NTI5 1447 aa21.2■□□□□ 0.98
ABCB1-207ENST00000488737 KANK4Q5T7N3 995 aaPredicted RBP21.2■□□□□ 0.98
ABCB1-207ENST00000488737 ABCA10Q8WWZ4 1543 aa21.19■□□□□ 0.98
ABCB1-207ENST00000488737 TOPBP1Q92547 1522 aa21.16■□□□□ 0.98
ABCB1-207ENST00000488737 TIAM1Q13009 1591 aa21.14■□□□□ 0.98
ABCB1-207ENST00000488737 CUL7Q14999 1698 aa21.13■□□□□ 0.97
ABCB1-207ENST00000488737 POLA1P09884 1462 aaPredicted RBP21.13■□□□□ 0.97
ABCB1-207ENST00000488737 ERCC6Q03468 1493 aa21.11■□□□□ 0.97
ABCB1-207ENST00000488737 CCNB3Q8WWL7 1395 aa21.1■□□□□ 0.97
ABCB1-207ENST00000488737 FHAD1B1AJZ9 1412 aa21.09■□□□□ 0.97
ABCB1-207ENST00000488737 DHX57Q6P158 1386 aaKnown RBP21.08■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms