RNA–Protein interactions for RNA: ENST00000485990.1

CWC27-202, Transcript of CWC27 spliceosome associated protein homolog, humanhuman

TSL 5

Gene CWC27, Length 671 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CWC27-202ENST00000485990 NISCHQ9Y2I1 1504 aa23.72■■□□□ 1.39
CWC27-202ENST00000485990 AEBP2Q6ZN18 517 aaPredicted RBP22.85■■□□□ 1.25
CWC27-202ENST00000485990 CHIC1Q5VXU3 224 aa21.41■■□□□ 1.02
CWC27-202ENST00000485990 CCDC180Q9P1Z9 1646 aa20.68■□□□□ 0.9
CWC27-202ENST00000485990 ABCC9O60706 1549 aa20.39■□□□□ 0.85
CWC27-202ENST00000485990 ZCCHC6Q5VYS8 1495 aaKnown RBP19.89■□□□□ 0.77
CWC27-202ENST00000485990 DCAF8L2P0C7V8 631 aa19.65■□□□□ 0.74
CWC27-202ENST00000485990 DCAF1Q9Y4B6 1507 aa19.64■□□□□ 0.73
CWC27-202ENST00000485990 SENP3Q9H4L4 574 aaPredicted RBP19.54■□□□□ 0.72
CWC27-202ENST00000485990 RB1CC1Q8TDY2 1594 aa19.5■□□□□ 0.71
CWC27-202ENST00000485990 MYO15BQ96JP2 1530 aa19.45■□□□□ 0.7
CWC27-202ENST00000485990 NACADO15069 1562 aa19.4■□□□□ 0.7
CWC27-202ENST00000485990 SHROOM4Q9ULL8 1493 aa19.25■□□□□ 0.67
CWC27-202ENST00000485990 PHF23Q9BUL5 403 aaPredicted RBP19.23■□□□□ 0.67
CWC27-202ENST00000485990 PABPN1Q86U42 306 aaKnown RBP eCLIP19.02■□□□□ 0.64
CWC27-202ENST00000485990 SCRIBQ14160 1630 aa18.98■□□□□ 0.63
CWC27-202ENST00000485990 UNC13AQ9UPW8 1703 aa18.94■□□□□ 0.62
CWC27-202ENST00000485990 DNAJC5BQ9UF47 199 aa18.89■□□□□ 0.61
CWC27-202ENST00000485990 BICRAQ9NZM4 1560 aa18.84■□□□□ 0.61
CWC27-202ENST00000485990 SUPT5HO00267 1087 aaKnown RBP18.53■□□□□ 0.56
CWC27-202ENST00000485990 EIF4G1Q04637 1599 aaKnown RBP18.42■□□□□ 0.54
CWC27-202ENST00000485990 CECR2Q9BXF3 1484 aa18.41■□□□□ 0.54
CWC27-202ENST00000485990 CC2D2AQ9P2K1 1620 aa18.4■□□□□ 0.54
CWC27-202ENST00000485990 RSF1Q96T23 1441 aaPredicted RBP18.38■□□□□ 0.53
CWC27-202ENST00000485990 BAZ1AQ9NRL2 1556 aaPredicted RBP18.32■□□□□ 0.52
CWC27-202ENST00000485990 MROH2BQ7Z745 1585 aa18.3■□□□□ 0.52
CWC27-202ENST00000485990 FOXD1Q16676 465 aa18.25■□□□□ 0.51
CWC27-202ENST00000485990 SMARCA4P51532 1647 aa18.22■□□□□ 0.51
CWC27-202ENST00000485990 WIZO95785 1651 aa18.11■□□□□ 0.49
CWC27-202ENST00000485990 PEG3Q9GZU2 1588 aa18.03■□□□□ 0.48
CWC27-202ENST00000485990 ATAD2BQ9ULI0 1458 aa17.99■□□□□ 0.47
CWC27-202ENST00000485990 SMARCA2P51531 1590 aa17.96■□□□□ 0.47
CWC27-202ENST00000485990 TOP2AP11388 1531 aaKnown RBP17.96■□□□□ 0.47
CWC27-202ENST00000485990 NCAPD3P42695 1498 aa17.89■□□□□ 0.45
CWC27-202ENST00000485990 BAZ1BQ9UIG0 1483 aaKnown RBP17.87■□□□□ 0.45
CWC27-202ENST00000485990 CCDC88BA6NC98 1476 aa17.8■□□□□ 0.44
CWC27-202ENST00000485990 HMGXB3Q12766 1538 aa17.79■□□□□ 0.44
CWC27-202ENST00000485990 ERCC6Q03468 1493 aa17.65■□□□□ 0.42
CWC27-202ENST00000485990 NESP48681 1621 aa17.54■□□□□ 0.4
CWC27-202ENST00000485990 CUX2O14529 1486 aa17.51■□□□□ 0.39
CWC27-202ENST00000485990 TRIM41Q8WV44 630 aa17.47■□□□□ 0.39
CWC27-202ENST00000485990 LAMC3Q9Y6N6 1575 aa17.47■□□□□ 0.39
CWC27-202ENST00000485990 CFTRP13569 1480 aa17.43■□□□□ 0.38
CWC27-202ENST00000485990 CADPSQ9ULU8 1353 aa17.4■□□□□ 0.38
CWC27-202ENST00000485990 PDS5BQ9NTI5 1447 aa17.4■□□□□ 0.38
CWC27-202ENST00000485990 ABCC8Q09428 1581 aa17.33■□□□□ 0.37
CWC27-202ENST00000485990 THOC2Q8NI27 1593 aaKnown RBP17.32■□□□□ 0.36
CWC27-202ENST00000485990 WRNQ14191 1432 aaPredicted RBP eCLIP17.3■□□□□ 0.36
CWC27-202ENST00000485990 KIF21AQ7Z4S6 1674 aa17.29■□□□□ 0.36
CWC27-202ENST00000485990 POTEDQ86YR6 584 aa17.29■□□□□ 0.36
CWC27-202ENST00000485990 DNAJC5Q9H3Z4 198 aa17.27■□□□□ 0.36
CWC27-202ENST00000485990 PRDM2Q13029 1718 aa17.24■□□□□ 0.35
CWC27-202ENST00000485990 MRC2Q9UBG0 1479 aa17.23■□□□□ 0.35
CWC27-202ENST00000485990 CEP164Q9UPV0 1460 aa17.21■□□□□ 0.35
CWC27-202ENST00000485990 FANCD2Q9BXW9 1451 aa17.19■□□□□ 0.34
CWC27-202ENST00000485990 MSH5O43196 834 aa17.19■□□□□ 0.34
CWC27-202ENST00000485990 SYNJ1O43426 1573 aa17.17■□□□□ 0.34
CWC27-202ENST00000485990 WDR62O43379 1518 aa17.15■□□□□ 0.34
CWC27-202ENST00000485990 TOP2BQ02880 1626 aa17.14■□□□□ 0.33
CWC27-202ENST00000485990 BIVM-ERCC5R4GMW8 1640 aa17.11■□□□□ 0.33
CWC27-202ENST00000485990 CUX1P39880 1505 aa17.11■□□□□ 0.33
CWC27-202ENST00000485990 FAM9AQ8IZU1 332 aaPredicted RBP17.1■□□□□ 0.33
CWC27-202ENST00000485990 SOGA1O94964 1423 aa17.04■□□□□ 0.32
CWC27-202ENST00000485990 EEA1Q15075 1411 aa17.04■□□□□ 0.32
CWC27-202ENST00000485990 LOC105371045A0A1W2PR82 267 aa17.01■□□□□ 0.31
CWC27-202ENST00000485990 PIAS4Q8N2W9 510 aaPredicted RBP17.01■□□□□ 0.31
CWC27-202ENST00000485990 DNMBPQ6XZF7 1577 aa17■□□□□ 0.31
CWC27-202ENST00000485990 URB2Q14146 1524 aaKnown RBP17■□□□□ 0.31
CWC27-202ENST00000485990 PLPPR3Q6T4P5 718 aa16.98■□□□□ 0.31
CWC27-202ENST00000485990 CSRNP3Q8WYN3 585 aa16.98■□□□□ 0.31
CWC27-202ENST00000485990 TOPBP1Q92547 1522 aa16.97■□□□□ 0.31
CWC27-202ENST00000485990 RUSC2Q8N2Y8 1516 aa16.96■□□□□ 0.31
CWC27-202ENST00000485990 FGD5Q6ZNL6 1462 aa16.95■□□□□ 0.3
CWC27-202ENST00000485990 KIF27Q86VH2 1401 aa16.89■□□□□ 0.29
CWC27-202ENST00000485990 POLA1P09884 1462 aaPredicted RBP16.88■□□□□ 0.29
CWC27-202ENST00000485990 IFT140Q96RY7 1462 aa16.86■□□□□ 0.29
CWC27-202ENST00000485990 PPP6R1Q9UPN7 881 aa16.83■□□□□ 0.28
CWC27-202ENST00000485990 RAD54L2Q9Y4B4 1467 aa16.83■□□□□ 0.28
CWC27-202ENST00000485990 EHMT2Q96KQ7 1210 aa16.82■□□□□ 0.28
CWC27-202ENST00000485990 ABCA10Q8WWZ4 1543 aa16.81■□□□□ 0.28
CWC27-202ENST00000485990 ADRA2BP18089 450 aa16.77■□□□□ 0.28
CWC27-202ENST00000485990 OSCARQ8IYS5 282 aa16.77■□□□□ 0.28
CWC27-202ENST00000485990 GOLGA3Q08378 1498 aa16.77■□□□□ 0.28
CWC27-202ENST00000485990 IGF1RP08069 1367 aa16.77■□□□□ 0.27
CWC27-202ENST00000485990 ZNF608Q9ULD9 1512 aaPredicted RBP16.76■□□□□ 0.27
CWC27-202ENST00000485990 KIF21BO75037 1637 aa16.76■□□□□ 0.27
CWC27-202ENST00000485990 TNIKQ9UKE5 1360 aa16.74■□□□□ 0.27
CWC27-202ENST00000485990 PRXQ9BXM0 1461 aa16.73■□□□□ 0.27
CWC27-202ENST00000485990 UBTFP17480 764 aaKnown RBP16.73■□□□□ 0.27
CWC27-202ENST00000485990 TARBP1Q13395 1621 aaKnown RBP16.7■□□□□ 0.26
CWC27-202ENST00000485990 WDR97A6NE52 1622 aa16.7■□□□□ 0.26
CWC27-202ENST00000485990 EIF4G3O43432 1585 aaKnown RBP16.69■□□□□ 0.26
CWC27-202ENST00000485990 TDRD9Q8NDG6 1382 aaKnown RBP16.69■□□□□ 0.26
CWC27-202ENST00000485990 ERICH3Q5RHP9 1530 aa16.69■□□□□ 0.26
CWC27-202ENST00000485990 RAPGEF2Q9Y4G8 1499 aa16.68■□□□□ 0.26
CWC27-202ENST00000485990 CARMIL1Q5VZK9 1371 aa16.68■□□□□ 0.26
CWC27-202ENST00000485990 GAPVD1Q14C86 1478 aa16.67■□□□□ 0.26
CWC27-202ENST00000485990 AQRO60306 1485 aaKnown RBP eCLIP16.65■□□□□ 0.262e-7■■■□□ 15
CWC27-202ENST00000485990 ABCA5Q8WWZ7 1642 aa16.63■□□□□ 0.25
CWC27-202ENST00000485990 FBLN2P98095 1184 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms