RNA–Protein interactions for RNA: ENST00000485604.1

PHF20-212, Transcript of PHD finger protein 20, humanhuman

TSL 3

Gene PHF20, Length 446 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF20-212ENST00000485604 DNAJC5Q9H3Z4 198 aa11.31□□□□□ -0.6
PHF20-212ENST00000485604 DNAJC5BQ9UF47 199 aa11.19□□□□□ -0.62
PHF20-212ENST00000485604 NISCHQ9Y2I1 1504 aa11.08□□□□□ -0.64
PHF20-212ENST00000485604 ABCC9O60706 1549 aa10.49□□□□□ -0.73
PHF20-212ENST00000485604 TRIM41Q8WV44 630 aa10.13□□□□□ -0.79
PHF20-212ENST00000485604 CCDC180Q9P1Z9 1646 aa9.96□□□□□ -0.81
PHF20-212ENST00000485604 AEBP2Q6ZN18 517 aaPredicted RBP9.96□□□□□ -0.82
PHF20-212ENST00000485604 ILDR1Q86SU0 546 aaPredicted RBP9.92□□□□□ -0.82
PHF20-212ENST00000485604 CUX2O14529 1486 aa9.65□□□□□ -0.87
PHF20-212ENST00000485604 CECR2Q9BXF3 1484 aa9.62□□□□□ -0.87
PHF20-212ENST00000485604 PABPN1Q86U42 306 aaKnown RBP eCLIP9.58□□□□□ -0.88
PHF20-212ENST00000485604 CC2D2AQ9P2K1 1620 aa9.41□□□□□ -0.9
PHF20-212ENST00000485604 RB1CC1Q8TDY2 1594 aa9.39□□□□□ -0.91
PHF20-212ENST00000485604 NACADO15069 1562 aa9.36□□□□□ -0.91
PHF20-212ENST00000485604 SOCS7O14512 581 aa9.33□□□□□ -0.92
PHF20-212ENST00000485604 MYO15BQ96JP2 1530 aa9.31□□□□□ -0.92
PHF20-212ENST00000485604 ZCCHC6Q5VYS8 1495 aaKnown RBP9.23□□□□□ -0.93
PHF20-212ENST00000485604 LMTK3Q96Q04 1460 aa9.23□□□□□ -0.93
PHF20-212ENST00000485604 UNC13AQ9UPW8 1703 aa9.22□□□□□ -0.93
PHF20-212ENST00000485604 DCAF1Q9Y4B6 1507 aa9.21□□□□□ -0.94
PHF20-212ENST00000485604 TRHP20396 242 aaPredicted RBP9.19□□□□□ -0.94
PHF20-212ENST00000485604 BICRAQ9NZM4 1560 aa9.19□□□□□ -0.94
PHF20-212ENST00000485604 ERCC6Q03468 1493 aa9.14□□□□□ -0.95
PHF20-212ENST00000485604 ILDR2Q71H61 639 aa9.12□□□□□ -0.95
PHF20-212ENST00000485604 SHROOM4Q9ULL8 1493 aa9.09□□□□□ -0.95
PHF20-212ENST00000485604 FBXO41Q8TF61 875 aa9.07□□□□□ -0.96
PHF20-212ENST00000485604 DCAF8L2P0C7V8 631 aa9.06□□□□□ -0.96
PHF20-212ENST00000485604 EIF4G1Q04637 1599 aaKnown RBP9.06□□□□□ -0.96
PHF20-212ENST00000485604 OSCARQ8IYS5 282 aa9.02□□□□□ -0.97
PHF20-212ENST00000485604 SCRIBQ14160 1630 aa9.02□□□□□ -0.97
PHF20-212ENST00000485604 RIMBP3CA6NJZ7 1639 aa8.98□□□□□ -0.97
PHF20-212ENST00000485604 RIMBP3BA6NNM3 1639 aa8.98□□□□□ -0.97
PHF20-212ENST00000485604 RIMBP3Q9UFD9 1639 aa8.98□□□□□ -0.97
PHF20-212ENST00000485604 CYB5RLQ6IPT4 315 aa8.88□□□□□ -0.99
PHF20-212ENST00000485604 DISP3Q9P2K9 1392 aa8.86□□□□□ -0.99
PHF20-212ENST00000485604 ERCC6L2Q5T890 1561 aa8.83□□□□□ -1
PHF20-212ENST00000485604 BAZ1AQ9NRL2 1556 aaPredicted RBP8.83□□□□□ -1
PHF20-212ENST00000485604 ARHGEF11O15085 1522 aa8.82□□□□□ -1
PHF20-212ENST00000485604 THOC2Q8NI27 1593 aaKnown RBP8.8□□□□□ -1
PHF20-212ENST00000485604 KDM4FA0A1W2PPD8 638 aa8.79□□□□□ -1
PHF20-212ENST00000485604 CHIC1Q5VXU3 224 aa8.65□□□□□ -1.02
PHF20-212ENST00000485604 SMARCA4P51532 1647 aa8.64□□□□□ -1.03
PHF20-212ENST00000485604 HECW2Q9P2P5 1572 aa8.64□□□□□ -1.03
PHF20-212ENST00000485604 NCAPD3P42695 1498 aa8.64□□□□□ -1.03
PHF20-212ENST00000485604 ARAP1Q96P48 1450 aa8.64□□□□□ -1.03
PHF20-212ENST00000485604 NESP48681 1621 aa8.62□□□□□ -1.03
PHF20-212ENST00000485604 HMGXB3Q12766 1538 aa8.62□□□□□ -1.03
PHF20-212ENST00000485604 ATAD2BQ9ULI0 1458 aa8.61□□□□□ -1.03
PHF20-212ENST00000485604 PEG3Q9GZU2 1588 aa8.61□□□□□ -1.03
PHF20-212ENST00000485604 SMARCA2P51531 1590 aa8.6□□□□□ -1.03
PHF20-212ENST00000485604 SYNJ2O15056 1496 aa8.55□□□□□ -1.04
PHF20-212ENST00000485604 SPATA31D1Q6ZQQ2 1576 aa8.55□□□□□ -1.04
PHF20-212ENST00000485604 MROH2BQ7Z745 1585 aa8.52□□□□□ -1.04
PHF20-212ENST00000485604 BAZ1BQ9UIG0 1483 aaKnown RBP8.51□□□□□ -1.05
PHF20-212ENST00000485604 LAMC3Q9Y6N6 1575 aa8.44□□□□□ -1.06
PHF20-212ENST00000485604 KIF21AQ7Z4S6 1674 aa8.43□□□□□ -1.06
PHF20-212ENST00000485604 WIZO95785 1651 aa8.4□□□□□ -1.06
PHF20-212ENST00000485604 WDR62O43379 1518 aa8.39□□□□□ -1.07
PHF20-212ENST00000485604 RSF1Q96T23 1441 aaPredicted RBP8.37□□□□□ -1.07
PHF20-212ENST00000485604 PDS5BQ9NTI5 1447 aa8.37□□□□□ -1.07
PHF20-212ENST00000485604 TOP2AP11388 1531 aaKnown RBP8.35□□□□□ -1.07
PHF20-212ENST00000485604 MRC2Q9UBG0 1479 aa8.35□□□□□ -1.07
PHF20-212ENST00000485604 CADPSQ9ULU8 1353 aa8.34□□□□□ -1.07
PHF20-212ENST00000485604 ADGRL1O94910 1474 aa8.32□□□□□ -1.08
PHF20-212ENST00000485604 CFTRP13569 1480 aa8.3□□□□□ -1.08
PHF20-212ENST00000485604 CERKQ8TCT0 537 aa8.29□□□□□ -1.08
PHF20-212ENST00000485604 IFFO2Q5TF58 517 aa8.27□□□□□ -1.09
PHF20-212ENST00000485604 FANCD2Q9BXW9 1451 aa8.26□□□□□ -1.09
PHF20-212ENST00000485604 CEP164Q9UPV0 1460 aa8.26□□□□□ -1.09
PHF20-212ENST00000485604 PRDM2Q13029 1718 aa8.25□□□□□ -1.09
PHF20-212ENST00000485604 KIF13AQ9H1H9 1805 aa8.22□□□□□ -1.09
PHF20-212ENST00000485604 URB2Q14146 1524 aaKnown RBP8.21□□□□□ -1.1
PHF20-212ENST00000485604 CCDC88BA6NC98 1476 aa8.19□□□□□ -1.1
PHF20-212ENST00000485604 KDM6BO15054 1643 aa8.18□□□□□ -1.1
PHF20-212ENST00000485604 SRCAPQ6ZRS2 3230 aa8.15□□□□□ -1.11
PHF20-212ENST00000485604 TOPBP1Q92547 1522 aa8.12□□□□□ -1.11
PHF20-212ENST00000485604 DNMBPQ6XZF7 1577 aa8.11□□□□□ -1.11
PHF20-212ENST00000485604 CHD1O14646 1710 aa8.1□□□□□ -1.11
PHF20-212ENST00000485604 IFT140Q96RY7 1462 aa8.1□□□□□ -1.11
PHF20-212ENST00000485604 ZNF608Q9ULD9 1512 aaPredicted RBP8.08□□□□□ -1.12
PHF20-212ENST00000485604 TARBP1Q13395 1621 aaKnown RBP8.08□□□□□ -1.12
PHF20-212ENST00000485604 EIF4G3O43432 1585 aaKnown RBP8.08□□□□□ -1.12
PHF20-212ENST00000485604 ABCC8Q09428 1581 aa8.08□□□□□ -1.12
PHF20-212ENST00000485604 GAPVD1Q14C86 1478 aa8.06□□□□□ -1.12
PHF20-212ENST00000485604 FAM69CQ0P6D2 419 aa8.05□□□□□ -1.12
PHF20-212ENST00000485604 POLA1P09884 1462 aaPredicted RBP8.05□□□□□ -1.12
PHF20-212ENST00000485604 CLASP1Q7Z460 1538 aa8.03□□□□□ -1.12
PHF20-212ENST00000485604 FBLN2P98095 1184 aa8.02□□□□□ -1.13
PHF20-212ENST00000485604 WDR97A6NE52 1622 aa8.02□□□□□ -1.13
PHF20-212ENST00000485604 CUX1P39880 1505 aa8.02□□□□□ -1.13
PHF20-212ENST00000485604 ABCC10Q5T3U5 1492 aa8□□□□□ -1.13
PHF20-212ENST00000485604 TOP2BQ02880 1626 aa7.99□□□□□ -1.13
PHF20-212ENST00000485604 FGD5Q6ZNL6 1462 aa7.99□□□□□ -1.13
PHF20-212ENST00000485604 RAD54L2Q9Y4B4 1467 aa7.98□□□□□ -1.13
PHF20-212ENST00000485604 AQRO60306 1485 aaKnown RBP eCLIP7.97□□□□□ -1.13
PHF20-212ENST00000485604 ABCA5Q8WWZ7 1642 aa7.95□□□□□ -1.14
PHF20-212ENST00000485604 MED1Q15648 1581 aaPredicted RBP7.94□□□□□ -1.14
PHF20-212ENST00000485604 SOGA1O94964 1423 aa7.94□□□□□ -1.14
PHF20-212ENST00000485604 SNAPC4Q5SXM2 1469 aa7.94□□□□□ -1.14
PHF20-212ENST00000485604 PCF11O94913 1555 aaKnown RBP7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms