RNA–Protein interactions for RNA: ENST00000484024.5

RGPD6-210, Transcript of RANBP2-like and GRIP domain containing 6, humanhuman

TSL 2

Gene RGPD6, Length 2,179 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD6-210ENST00000484024 AEBP2Q6ZN18 517 aaPredicted RBP10.72□□□□□ -0.69
RGPD6-210ENST00000484024 CHIC1Q5VXU3 224 aa10.49□□□□□ -0.73
RGPD6-210ENST00000484024 NISCHQ9Y2I1 1504 aa10.47□□□□□ -0.73
RGPD6-210ENST00000484024 PHF23Q9BUL5 403 aaPredicted RBP9.22□□□□□ -0.93
RGPD6-210ENST00000484024 ABCC9O60706 1549 aa9.2□□□□□ -0.94
RGPD6-210ENST00000484024 SENP3Q9H4L4 574 aaPredicted RBP9.1□□□□□ -0.95
RGPD6-210ENST00000484024 CCDC180Q9P1Z9 1646 aa8.92□□□□□ -0.98
RGPD6-210ENST00000484024 SHROOM4Q9ULL8 1493 aa8.89□□□□□ -0.99
RGPD6-210ENST00000484024 ZCCHC6Q5VYS8 1495 aaKnown RBP8.85□□□□□ -0.99
RGPD6-210ENST00000484024 DNAJC5BQ9UF47 199 aa8.85□□□□□ -0.99
RGPD6-210ENST00000484024 DCAF8L2P0C7V8 631 aa8.72□□□□□ -1.01
RGPD6-210ENST00000484024 SUPT5HO00267 1087 aaKnown RBP8.7□□□□□ -1.02
RGPD6-210ENST00000484024 RB1CC1Q8TDY2 1594 aa8.61□□□□□ -1.03
RGPD6-210ENST00000484024 DCAF1Q9Y4B6 1507 aa8.6□□□□□ -1.03
RGPD6-210ENST00000484024 PABPN1Q86U42 306 aaKnown RBP eCLIP8.55□□□□□ -1.04
RGPD6-210ENST00000484024 PLPPR3Q6T4P5 718 aa8.53□□□□□ -1.04
RGPD6-210ENST00000484024 UNC13AQ9UPW8 1703 aa8.5□□□□□ -1.05
RGPD6-210ENST00000484024 NACADO15069 1562 aa8.48□□□□□ -1.05
RGPD6-210ENST00000484024 FOXD1Q16676 465 aa8.44□□□□□ -1.06
RGPD6-210ENST00000484024 BICRAQ9NZM4 1560 aa8.39□□□□□ -1.07
RGPD6-210ENST00000484024 MYO15BQ96JP2 1530 aa8.37□□□□□ -1.07
RGPD6-210ENST00000484024 SCRIBQ14160 1630 aa8.36□□□□□ -1.07
RGPD6-210ENST00000484024 CC2D2AQ9P2K1 1620 aa8.29□□□□□ -1.08
RGPD6-210ENST00000484024 CECR2Q9BXF3 1484 aa8.28□□□□□ -1.08
RGPD6-210ENST00000484024 RSF1Q96T23 1441 aaPredicted RBP8.27□□□□□ -1.09
RGPD6-210ENST00000484024 DNAJC5Q9H3Z4 198 aa8.25□□□□□ -1.09
RGPD6-210ENST00000484024 EIF4G1Q04637 1599 aaKnown RBP8.19□□□□□ -1.1
RGPD6-210ENST00000484024 LOC105371045A0A1W2PR82 267 aa8.17□□□□□ -1.1
RGPD6-210ENST00000484024 ADRA2BP18089 450 aa8.14□□□□□ -1.11
RGPD6-210ENST00000484024 PPP6R1Q9UPN7 881 aa8.14□□□□□ -1.11
RGPD6-210ENST00000484024 MROH2BQ7Z745 1585 aa8.13□□□□□ -1.11
RGPD6-210ENST00000484024 TRIM41Q8WV44 630 aa8.12□□□□□ -1.11
RGPD6-210ENST00000484024 PCGF6Q9BYE7 350 aa8.11□□□□□ -1.11
RGPD6-210ENST00000484024 POTEDQ86YR6 584 aa8.08□□□□□ -1.12
RGPD6-210ENST00000484024 WIZO95785 1651 aa8.08□□□□□ -1.12
RGPD6-210ENST00000484024 HRCP23327 699 aa8.07□□□□□ -1.12
RGPD6-210ENST00000484024 BAZ1AQ9NRL2 1556 aaPredicted RBP8.06□□□□□ -1.12
RGPD6-210ENST00000484024 FAM9AQ8IZU1 332 aaPredicted RBP8.04□□□□□ -1.12
RGPD6-210ENST00000484024 SMARCA4P51532 1647 aa7.98□□□□□ -1.13
RGPD6-210ENST00000484024 TRIM26Q12899 539 aaPredicted RBP7.98□□□□□ -1.13
RGPD6-210ENST00000484024 EHMT2Q96KQ7 1210 aa7.98□□□□□ -1.13
RGPD6-210ENST00000484024 TOP2AP11388 1531 aaKnown RBP7.97□□□□□ -1.13
RGPD6-210ENST00000484024 PIAS4Q8N2W9 510 aaPredicted RBP7.97□□□□□ -1.13
RGPD6-210ENST00000484024 CUX2O14529 1486 aa7.96□□□□□ -1.14
RGPD6-210ENST00000484024 ERCC6Q03468 1493 aa7.95□□□□□ -1.14
RGPD6-210ENST00000484024 CCDC88BA6NC98 1476 aa7.94□□□□□ -1.14
RGPD6-210ENST00000484024 SMARCA2P51531 1590 aa7.91□□□□□ -1.14
RGPD6-210ENST00000484024 PPARGC1BQ86YN6 1023 aaKnown RBP7.9□□□□□ -1.15
RGPD6-210ENST00000484024 ABCC8Q09428 1581 aa7.88□□□□□ -1.15
RGPD6-210ENST00000484024 NESP48681 1621 aa7.84□□□□□ -1.15
RGPD6-210ENST00000484024 PEG3Q9GZU2 1588 aa7.83□□□□□ -1.16
RGPD6-210ENST00000484024 NCAPD3P42695 1498 aa7.81□□□□□ -1.16
RGPD6-210ENST00000484024 SOGA1O94964 1423 aa7.8□□□□□ -1.16
RGPD6-210ENST00000484024 ATAD2BQ9ULI0 1458 aa7.8□□□□□ -1.16
RGPD6-210ENST00000484024 ZEB1P37275 1124 aaPredicted RBP7.79□□□□□ -1.16
RGPD6-210ENST00000484024 BAZ1BQ9UIG0 1483 aaKnown RBP7.79□□□□□ -1.16
RGPD6-210ENST00000484024 MSH5O43196 834 aa7.78□□□□□ -1.16
RGPD6-210ENST00000484024 EEA1Q15075 1411 aa7.78□□□□□ -1.16
RGPD6-210ENST00000484024 THOC2Q8NI27 1593 aaKnown RBP7.78□□□□□ -1.16
RGPD6-210ENST00000484024 WRNQ14191 1432 aaPredicted RBP eCLIP7.77□□□□□ -1.17
RGPD6-210ENST00000484024 CSRNP3Q8WYN3 585 aa7.77□□□□□ -1.17
RGPD6-210ENST00000484024 RUSC2Q8N2Y8 1516 aa7.76□□□□□ -1.17
RGPD6-210ENST00000484024 KIF21AQ7Z4S6 1674 aa7.76□□□□□ -1.17
RGPD6-210ENST00000484024 CEP162Q5TB80 1403 aa7.75□□□□□ -1.17
RGPD6-210ENST00000484024 UBTFP17480 764 aaKnown RBP7.75□□□□□ -1.17
RGPD6-210ENST00000484024 TNIKQ9UKE5 1360 aa7.75□□□□□ -1.17
RGPD6-210ENST00000484024 HMGXB3Q12766 1538 aa7.74□□□□□ -1.17
RGPD6-210ENST00000484024 SYNJ1O43426 1573 aa7.73□□□□□ -1.17
RGPD6-210ENST00000484024 GOLGA3Q08378 1498 aa7.72□□□□□ -1.17
RGPD6-210ENST00000484024 TTBK1Q5TCY1 1321 aaPredicted RBP7.7□□□□□ -1.18
RGPD6-210ENST00000484024 LAMC3Q9Y6N6 1575 aa7.69□□□□□ -1.18
RGPD6-210ENST00000484024 CEP164Q9UPV0 1460 aa7.68□□□□□ -1.18
RGPD6-210ENST00000484024 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.66□□□□□ -1.18
RGPD6-210ENST00000484024 CCER1Q8TC90 406 aaPredicted RBP7.66□□□□□ -1.18
RGPD6-210ENST00000484024 KIF21BO75037 1637 aa7.65□□□□□ -1.18
RGPD6-210ENST00000484024 PDS5BQ9NTI5 1447 aa7.65□□□□□ -1.18
RGPD6-210ENST00000484024 TOP2BQ02880 1626 aa7.64□□□□□ -1.19
RGPD6-210ENST00000484024 CLIP1P30622 1438 aa7.63□□□□□ -1.19
RGPD6-210ENST00000484024 RAPGEF2Q9Y4G8 1499 aa7.62□□□□□ -1.19
RGPD6-210ENST00000484024 MRC2Q9UBG0 1479 aa7.61□□□□□ -1.19
RGPD6-210ENST00000484024 RANGAP1P46060 587 aaPredicted RBP7.61□□□□□ -1.19
RGPD6-210ENST00000484024 BIVM-ERCC5R4GMW8 1640 aa7.6□□□□□ -1.19
RGPD6-210ENST00000484024 WDR62O43379 1518 aa7.6□□□□□ -1.19
RGPD6-210ENST00000484024 OSCARQ8IYS5 282 aa7.59□□□□□ -1.19
RGPD6-210ENST00000484024 VPS8Q8N3P4 1428 aa7.58□□□□□ -1.2
RGPD6-210ENST00000484024 CADPSQ9ULU8 1353 aa7.58□□□□□ -1.2
RGPD6-210ENST00000484024 CFTRP13569 1480 aa7.58□□□□□ -1.2
RGPD6-210ENST00000484024 APLP2Q06481 763 aa7.58□□□□□ -1.2
RGPD6-210ENST00000484024 CUX1P39880 1505 aa7.58□□□□□ -1.2
RGPD6-210ENST00000484024 PRXQ9BXM0 1461 aa7.55□□□□□ -1.2
RGPD6-210ENST00000484024 RIMBP3CA6NJZ7 1639 aa7.55□□□□□ -1.2
RGPD6-210ENST00000484024 RIMBP3BA6NNM3 1639 aa7.55□□□□□ -1.2
RGPD6-210ENST00000484024 RIMBP3Q9UFD9 1639 aa7.55□□□□□ -1.2
RGPD6-210ENST00000484024 ERICH3Q5RHP9 1530 aa7.55□□□□□ -1.2
RGPD6-210ENST00000484024 KIF27Q86VH2 1401 aa7.55□□□□□ -1.2
RGPD6-210ENST00000484024 HNRNPUL2Q1KMD3 747 aaKnown RBP7.53□□□□□ -1.2
RGPD6-210ENST00000484024 PPP4R3CPQ6ZMV5 832 aa7.53□□□□□ -1.2
RGPD6-210ENST00000484024 FANCD2Q9BXW9 1451 aa7.52□□□□□ -1.21
RGPD6-210ENST00000484024 ARAP1Q96P48 1450 aa7.5□□□□□ -1.21
RGPD6-210ENST00000484024 PRDM2Q13029 1718 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms