RNA–Protein interactions for RNA: ENST00000481460.1

TRAPPC10-209, Transcript of trafficking protein particle complex 10, humanhuman

TSL 2

Gene TRAPPC10, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC10-209ENST00000481460 AEBP2Q6ZN18 517 aaPredicted RBP15.81■□□□□ 0.12
TRAPPC10-209ENST00000481460 CHIC1Q5VXU3 224 aa15.5■□□□□ 0.07
TRAPPC10-209ENST00000481460 DNAJC5BQ9UF47 199 aa14.12□□□□□ -0.15
TRAPPC10-209ENST00000481460 DNAJC5Q9H3Z4 198 aa13.87□□□□□ -0.19
TRAPPC10-209ENST00000481460 ABCC9O60706 1549 aa13.81□□□□□ -0.2
TRAPPC10-209ENST00000481460 PHF23Q9BUL5 403 aaPredicted RBP13.69□□□□□ -0.22
TRAPPC10-209ENST00000481460 NISCHQ9Y2I1 1504 aa13.65□□□□□ -0.22
TRAPPC10-209ENST00000481460 SENP3Q9H4L4 574 aaPredicted RBP13.33□□□□□ -0.28
TRAPPC10-209ENST00000481460 CCDC180Q9P1Z9 1646 aa12.8□□□□□ -0.36
TRAPPC10-209ENST00000481460 RB1CC1Q8TDY2 1594 aa12.71□□□□□ -0.37
TRAPPC10-209ENST00000481460 PABPN1Q86U42 306 aaKnown RBP eCLIP12.66□□□□□ -0.38
TRAPPC10-209ENST00000481460 CECR2Q9BXF3 1484 aa12.62□□□□□ -0.39
TRAPPC10-209ENST00000481460 PLPPR3Q6T4P5 718 aa12.59□□□□□ -0.39
TRAPPC10-209ENST00000481460 TRIM41Q8WV44 630 aa12.56□□□□□ -0.4
TRAPPC10-209ENST00000481460 CUX2O14529 1486 aa12.5□□□□□ -0.41
TRAPPC10-209ENST00000481460 CC2D2AQ9P2K1 1620 aa12.49□□□□□ -0.41
TRAPPC10-209ENST00000481460 UNC13AQ9UPW8 1703 aa12.46□□□□□ -0.41
TRAPPC10-209ENST00000481460 BICRAQ9NZM4 1560 aa12.43□□□□□ -0.42
TRAPPC10-209ENST00000481460 FOXD1Q16676 465 aa12.4□□□□□ -0.42
TRAPPC10-209ENST00000481460 NACADO15069 1562 aa12.38□□□□□ -0.43
TRAPPC10-209ENST00000481460 SHROOM4Q9ULL8 1493 aa12.2□□□□□ -0.46
TRAPPC10-209ENST00000481460 EIF4G1Q04637 1599 aaKnown RBP12.18□□□□□ -0.46
TRAPPC10-209ENST00000481460 PPP6R1Q9UPN7 881 aa12.06□□□□□ -0.48
TRAPPC10-209ENST00000481460 ADRA2BP18089 450 aa12.01□□□□□ -0.49
TRAPPC10-209ENST00000481460 ILDR1Q86SU0 546 aaPredicted RBP12□□□□□ -0.49
TRAPPC10-209ENST00000481460 ERCC6Q03468 1493 aa11.99□□□□□ -0.49
TRAPPC10-209ENST00000481460 MYO15BQ96JP2 1530 aa11.91□□□□□ -0.5
TRAPPC10-209ENST00000481460 DCAF8L2P0C7V8 631 aa11.82□□□□□ -0.52
TRAPPC10-209ENST00000481460 THOC2Q8NI27 1593 aaKnown RBP11.73□□□□□ -0.53
TRAPPC10-209ENST00000481460 OSCARQ8IYS5 282 aa11.69□□□□□ -0.54
TRAPPC10-209ENST00000481460 PIAS4Q8N2W9 510 aaPredicted RBP11.67□□□□□ -0.54
TRAPPC10-209ENST00000481460 RIMBP3CA6NJZ7 1639 aa11.66□□□□□ -0.54
TRAPPC10-209ENST00000481460 RIMBP3BA6NNM3 1639 aa11.66□□□□□ -0.54
TRAPPC10-209ENST00000481460 RIMBP3Q9UFD9 1639 aa11.66□□□□□ -0.54
TRAPPC10-209ENST00000481460 TRHP20396 242 aaPredicted RBP11.63□□□□□ -0.55
TRAPPC10-209ENST00000481460 BAZ1AQ9NRL2 1556 aaPredicted RBP11.62□□□□□ -0.55
TRAPPC10-209ENST00000481460 NESP48681 1621 aa11.56□□□□□ -0.56
TRAPPC10-209ENST00000481460 SCRIBQ14160 1630 aa11.54□□□□□ -0.56
TRAPPC10-209ENST00000481460 ARHGEF11O15085 1522 aa11.5□□□□□ -0.57
TRAPPC10-209ENST00000481460 NCAPD3P42695 1498 aa11.47□□□□□ -0.57
TRAPPC10-209ENST00000481460 CYB5RLQ6IPT4 315 aa11.44□□□□□ -0.58
TRAPPC10-209ENST00000481460 SMARCA2P51531 1590 aa11.41□□□□□ -0.58
TRAPPC10-209ENST00000481460 KIF21AQ7Z4S6 1674 aa11.39□□□□□ -0.59
TRAPPC10-209ENST00000481460 LAMC3Q9Y6N6 1575 aa11.36□□□□□ -0.59
TRAPPC10-209ENST00000481460 MSH5O43196 834 aa11.34□□□□□ -0.59
TRAPPC10-209ENST00000481460 WDR62O43379 1518 aa11.31□□□□□ -0.6
TRAPPC10-209ENST00000481460 SOCS7O14512 581 aa11.31□□□□□ -0.6
TRAPPC10-209ENST00000481460 ARAP1Q96P48 1450 aa11.31□□□□□ -0.6
TRAPPC10-209ENST00000481460 PDS5BQ9NTI5 1447 aa11.3□□□□□ -0.6
TRAPPC10-209ENST00000481460 DCAF1Q9Y4B6 1507 aa11.29□□□□□ -0.6
TRAPPC10-209ENST00000481460 LMTK3Q96Q04 1460 aa11.26□□□□□ -0.61
TRAPPC10-209ENST00000481460 MRC2Q9UBG0 1479 aa11.26□□□□□ -0.61
TRAPPC10-209ENST00000481460 FBXO41Q8TF61 875 aa11.25□□□□□ -0.61
TRAPPC10-209ENST00000481460 HMGXB3Q12766 1538 aa11.25□□□□□ -0.61
TRAPPC10-209ENST00000481460 ATAD2BQ9ULI0 1458 aa11.21□□□□□ -0.61
TRAPPC10-209ENST00000481460 KDM4FA0A1W2PPD8 638 aa11.19□□□□□ -0.62
TRAPPC10-209ENST00000481460 ERCC6L2Q5T890 1561 aa11.16□□□□□ -0.62
TRAPPC10-209ENST00000481460 PPP4R3CPQ6ZMV5 832 aa11.13□□□□□ -0.63
TRAPPC10-209ENST00000481460 ILDR2Q71H61 639 aa11.13□□□□□ -0.63
TRAPPC10-209ENST00000481460 RSF1Q96T23 1441 aaPredicted RBP11.12□□□□□ -0.63
TRAPPC10-209ENST00000481460 ZCCHC6Q5VYS8 1495 aaKnown RBP11.05□□□□□ -0.64
TRAPPC10-209ENST00000481460 CADPSQ9ULU8 1353 aa11.02□□□□□ -0.65
TRAPPC10-209ENST00000481460 HECW2Q9P2P5 1572 aa11□□□□□ -0.65
TRAPPC10-209ENST00000481460 KCNA4P22459 653 aa10.99□□□□□ -0.65
TRAPPC10-209ENST00000481460 BAZ1BQ9UIG0 1483 aaKnown RBP10.97□□□□□ -0.65
TRAPPC10-209ENST00000481460 CEP164Q9UPV0 1460 aa10.95□□□□□ -0.66
TRAPPC10-209ENST00000481460 SMARCA4P51532 1647 aa10.94□□□□□ -0.66
TRAPPC10-209ENST00000481460 SCAF1Q9H7N4 1312 aaKnown RBP10.92□□□□□ -0.66
TRAPPC10-209ENST00000481460 CHD1O14646 1710 aa10.92□□□□□ -0.66
TRAPPC10-209ENST00000481460 DISP3Q9P2K9 1392 aa10.9□□□□□ -0.66
TRAPPC10-209ENST00000481460 MAPK8IP2Q13387 824 aaPredicted RBP10.89□□□□□ -0.67
TRAPPC10-209ENST00000481460 ZNF608Q9ULD9 1512 aaPredicted RBP10.89□□□□□ -0.67
TRAPPC10-209ENST00000481460 PEG3Q9GZU2 1588 aa10.88□□□□□ -0.67
TRAPPC10-209ENST00000481460 KIF13AQ9H1H9 1805 aa10.88□□□□□ -0.67
TRAPPC10-209ENST00000481460 SYNJ2O15056 1496 aa10.86□□□□□ -0.67
TRAPPC10-209ENST00000481460 URB2Q14146 1524 aaKnown RBP10.85□□□□□ -0.67
TRAPPC10-209ENST00000481460 FANCD2Q9BXW9 1451 aa10.85□□□□□ -0.67
TRAPPC10-209ENST00000481460 NCBP3Q53F19 620 aaKnown RBP10.82□□□□□ -0.68
TRAPPC10-209ENST00000481460 IFT140Q96RY7 1462 aa10.81□□□□□ -0.68
TRAPPC10-209ENST00000481460 CLASP1Q7Z460 1538 aa10.81□□□□□ -0.68
TRAPPC10-209ENST00000481460 CNKSR2Q8WXI2 1034 aa10.78□□□□□ -0.68
TRAPPC10-209ENST00000481460 EIF4G3O43432 1585 aaKnown RBP10.76□□□□□ -0.69
TRAPPC10-209ENST00000481460 ADGRL1O94910 1474 aa10.75□□□□□ -0.69
TRAPPC10-209ENST00000481460 GAPVD1Q14C86 1478 aa10.75□□□□□ -0.69
TRAPPC10-209ENST00000481460 KDM6BO15054 1643 aa10.71□□□□□ -0.69
TRAPPC10-209ENST00000481460 NPM3O75607 178 aaKnown RBP10.71□□□□□ -0.69
TRAPPC10-209ENST00000481460 SPATA31D1Q6ZQQ2 1576 aa10.7□□□□□ -0.7
TRAPPC10-209ENST00000481460 FBLN2P98095 1184 aa10.7□□□□□ -0.7
TRAPPC10-209ENST00000481460 DMRT2Q9Y5R5 561 aa10.68□□□□□ -0.7
TRAPPC10-209ENST00000481460 CFTRP13569 1480 aa10.67□□□□□ -0.7
TRAPPC10-209ENST00000481460 SYNJ1O43426 1573 aa10.65□□□□□ -0.71
TRAPPC10-209ENST00000481460 AQRO60306 1485 aaKnown RBP eCLIP10.63□□□□□ -0.71
TRAPPC10-209ENST00000481460 ABCC10Q5T3U5 1492 aa10.62□□□□□ -0.71
TRAPPC10-209ENST00000481460 FAM69CQ0P6D2 419 aa10.58□□□□□ -0.72
TRAPPC10-209ENST00000481460 TARBP1Q13395 1621 aaKnown RBP10.57□□□□□ -0.72
TRAPPC10-209ENST00000481460 RNF216Q9NWF9 866 aaPredicted RBP10.56□□□□□ -0.72
TRAPPC10-209ENST00000481460 MROH2BQ7Z745 1585 aa10.54□□□□□ -0.72
TRAPPC10-209ENST00000481460 DIP2BQ9P265 1576 aa10.54□□□□□ -0.72
TRAPPC10-209ENST00000481460 CERKQ8TCT0 537 aa10.53□□□□□ -0.72
TRAPPC10-209ENST00000481460 TOPBP1Q92547 1522 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms