RNA–Protein interactions for RNA: ENST00000480016.1

EFEMP1-211, Transcript of EGF containing fibulin extracellular matrix protein 1, humanhuman

TSL 2

Gene EFEMP1, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFEMP1-211ENST00000480016 AEBP2Q6ZN18 517 aaPredicted RBP25.18■■□□□ 1.62
EFEMP1-211ENST00000480016 CHIC1Q5VXU3 224 aa24.14■■□□□ 1.45
EFEMP1-211ENST00000480016 DNAJC5BQ9UF47 199 aa21.94■■□□□ 1.1
EFEMP1-211ENST00000480016 SENP3Q9H4L4 574 aaPredicted RBP21.5■■□□□ 1.03
EFEMP1-211ENST00000480016 DNAJC5Q9H3Z4 198 aa21.49■■□□□ 1.03
EFEMP1-211ENST00000480016 ABCC9O60706 1549 aa21.31■■□□□ 1
EFEMP1-211ENST00000480016 PHF23Q9BUL5 403 aaPredicted RBP21.23■□□□□ 0.99
EFEMP1-211ENST00000480016 NISCHQ9Y2I1 1504 aa20.69■□□□□ 0.9
EFEMP1-211ENST00000480016 FOXD1Q16676 465 aa19.98■□□□□ 0.79
EFEMP1-211ENST00000480016 TRIM41Q8WV44 630 aa19.65■□□□□ 0.74
EFEMP1-211ENST00000480016 PABPN1Q86U42 306 aaKnown RBP eCLIP19.62■□□□□ 0.73
EFEMP1-211ENST00000480016 CECR2Q9BXF3 1484 aa19.39■□□□□ 0.69
EFEMP1-211ENST00000480016 PLPPR3Q6T4P5 718 aa19.38■□□□□ 0.69
EFEMP1-211ENST00000480016 RB1CC1Q8TDY2 1594 aa19.34■□□□□ 0.69
EFEMP1-211ENST00000480016 CCDC180Q9P1Z9 1646 aa19.29■□□□□ 0.68
EFEMP1-211ENST00000480016 CC2D2AQ9P2K1 1620 aa19.12■□□□□ 0.65
EFEMP1-211ENST00000480016 CUX2O14529 1486 aa19.1■□□□□ 0.65
EFEMP1-211ENST00000480016 BICRAQ9NZM4 1560 aa18.96■□□□□ 0.63
EFEMP1-211ENST00000480016 UNC13AQ9UPW8 1703 aa18.91■□□□□ 0.62
EFEMP1-211ENST00000480016 PPP6R1Q9UPN7 881 aa18.81■□□□□ 0.6
EFEMP1-211ENST00000480016 ADRA2BP18089 450 aa18.77■□□□□ 0.6
EFEMP1-211ENST00000480016 NACADO15069 1562 aa18.76■□□□□ 0.59
EFEMP1-211ENST00000480016 ILDR1Q86SU0 546 aaPredicted RBP18.74■□□□□ 0.59
EFEMP1-211ENST00000480016 PIAS4Q8N2W9 510 aaPredicted RBP18.72■□□□□ 0.59
EFEMP1-211ENST00000480016 MSH5O43196 834 aa18.66■□□□□ 0.58
EFEMP1-211ENST00000480016 EIF4G1Q04637 1599 aaKnown RBP18.59■□□□□ 0.57
EFEMP1-211ENST00000480016 ERCC6Q03468 1493 aa18.45■□□□□ 0.54
EFEMP1-211ENST00000480016 DCAF8L2P0C7V8 631 aa18.37■□□□□ 0.53
EFEMP1-211ENST00000480016 SHROOM4Q9ULL8 1493 aa18.36■□□□□ 0.53
EFEMP1-211ENST00000480016 TRHP20396 242 aaPredicted RBP18.12■□□□□ 0.49
EFEMP1-211ENST00000480016 OSCARQ8IYS5 282 aa18.03■□□□□ 0.48
EFEMP1-211ENST00000480016 RIMBP3CA6NJZ7 1639 aa17.9■□□□□ 0.46
EFEMP1-211ENST00000480016 RIMBP3BA6NNM3 1639 aa17.9■□□□□ 0.46
EFEMP1-211ENST00000480016 RIMBP3Q9UFD9 1639 aa17.9■□□□□ 0.46
EFEMP1-211ENST00000480016 THOC2Q8NI27 1593 aaKnown RBP17.89■□□□□ 0.45
EFEMP1-211ENST00000480016 MYO15BQ96JP2 1530 aa17.88■□□□□ 0.45
EFEMP1-211ENST00000480016 POTEDQ86YR6 584 aa17.85■□□□□ 0.45
EFEMP1-211ENST00000480016 NESP48681 1621 aa17.79■□□□□ 0.44
EFEMP1-211ENST00000480016 BAZ1AQ9NRL2 1556 aaPredicted RBP17.78■□□□□ 0.44
EFEMP1-211ENST00000480016 CYB5RLQ6IPT4 315 aa17.75■□□□□ 0.43
EFEMP1-211ENST00000480016 ARHGEF11O15085 1522 aa17.66■□□□□ 0.42
EFEMP1-211ENST00000480016 SCRIBQ14160 1630 aa17.65■□□□□ 0.42
EFEMP1-211ENST00000480016 SOCS7O14512 581 aa17.57■□□□□ 0.4
EFEMP1-211ENST00000480016 SMARCA2P51531 1590 aa17.54■□□□□ 0.4
EFEMP1-211ENST00000480016 LMTK3Q96Q04 1460 aa17.5■□□□□ 0.39
EFEMP1-211ENST00000480016 NCAPD3P42695 1498 aa17.44■□□□□ 0.38
EFEMP1-211ENST00000480016 FBXO41Q8TF61 875 aa17.42■□□□□ 0.38
EFEMP1-211ENST00000480016 ILDR2Q71H61 639 aa17.4■□□□□ 0.38
EFEMP1-211ENST00000480016 ARAP1Q96P48 1450 aa17.37■□□□□ 0.37
EFEMP1-211ENST00000480016 KIF21AQ7Z4S6 1674 aa17.37■□□□□ 0.37
EFEMP1-211ENST00000480016 KDM4FA0A1W2PPD8 638 aa17.33■□□□□ 0.36
EFEMP1-211ENST00000480016 PDS5BQ9NTI5 1447 aa17.25■□□□□ 0.35
EFEMP1-211ENST00000480016 LAMC3Q9Y6N6 1575 aa17.24■□□□□ 0.35
EFEMP1-211ENST00000480016 SCAF1Q9H7N4 1312 aaKnown RBP17.23■□□□□ 0.35
EFEMP1-211ENST00000480016 WDR62O43379 1518 aa17.21■□□□□ 0.35
EFEMP1-211ENST00000480016 MRC2Q9UBG0 1479 aa17.2■□□□□ 0.34
EFEMP1-211ENST00000480016 MAPK8IP2Q13387 824 aaPredicted RBP17.17■□□□□ 0.34
EFEMP1-211ENST00000480016 ERCC6L2Q5T890 1561 aa17.12■□□□□ 0.33
EFEMP1-211ENST00000480016 ATAD2BQ9ULI0 1458 aa17.09■□□□□ 0.33
EFEMP1-211ENST00000480016 DMRT2Q9Y5R5 561 aa17.07■□□□□ 0.32
EFEMP1-211ENST00000480016 HMGXB3Q12766 1538 aa17.01■□□□□ 0.31
EFEMP1-211ENST00000480016 DISP3Q9P2K9 1392 aa17.01■□□□□ 0.31
EFEMP1-211ENST00000480016 PPP4R3CPQ6ZMV5 832 aa17■□□□□ 0.31
EFEMP1-211ENST00000480016 HECW2Q9P2P5 1572 aa16.95■□□□□ 0.3
EFEMP1-211ENST00000480016 RSF1Q96T23 1441 aaPredicted RBP16.95■□□□□ 0.3
EFEMP1-211ENST00000480016 DCAF1Q9Y4B6 1507 aa16.94■□□□□ 0.3
EFEMP1-211ENST00000480016 CADPSQ9ULU8 1353 aa16.81■□□□□ 0.28
EFEMP1-211ENST00000480016 SYNJ2O15056 1496 aa16.79■□□□□ 0.28
EFEMP1-211ENST00000480016 BAZ1BQ9UIG0 1483 aaKnown RBP16.73■□□□□ 0.27
EFEMP1-211ENST00000480016 ZNF608Q9ULD9 1512 aaPredicted RBP16.73■□□□□ 0.27
EFEMP1-211ENST00000480016 CEP164Q9UPV0 1460 aa16.72■□□□□ 0.27
EFEMP1-211ENST00000480016 ZCCHC6Q5VYS8 1495 aaKnown RBP16.69■□□□□ 0.26
EFEMP1-211ENST00000480016 SMARCA4P51532 1647 aa16.69■□□□□ 0.26
EFEMP1-211ENST00000480016 CHD1O14646 1710 aa16.65■□□□□ 0.26
EFEMP1-211ENST00000480016 CNKSR2Q8WXI2 1034 aa16.65■□□□□ 0.26
EFEMP1-211ENST00000480016 FBLN2P98095 1184 aa16.6■□□□□ 0.25
EFEMP1-211ENST00000480016 URB2Q14146 1524 aaKnown RBP16.6■□□□□ 0.25
EFEMP1-211ENST00000480016 KIF13AQ9H1H9 1805 aa16.57■□□□□ 0.24
EFEMP1-211ENST00000480016 ADGRL1O94910 1474 aa16.57■□□□□ 0.24
EFEMP1-211ENST00000480016 FANCD2Q9BXW9 1451 aa16.57■□□□□ 0.24
EFEMP1-211ENST00000480016 HOXD11P31277 338 aaPredicted RBP16.52■□□□□ 0.24
EFEMP1-211ENST00000480016 SPATA31D1Q6ZQQ2 1576 aa16.51■□□□□ 0.23
EFEMP1-211ENST00000480016 GAPVD1Q14C86 1478 aa16.48■□□□□ 0.23
EFEMP1-211ENST00000480016 IFT140Q96RY7 1462 aa16.48■□□□□ 0.23
EFEMP1-211ENST00000480016 CLASP1Q7Z460 1538 aa16.48■□□□□ 0.23
EFEMP1-211ENST00000480016 RNF216Q9NWF9 866 aaPredicted RBP16.45■□□□□ 0.22
EFEMP1-211ENST00000480016 NCBP3Q53F19 620 aaKnown RBP16.44■□□□□ 0.22
EFEMP1-211ENST00000480016 KDM6BO15054 1643 aa16.43■□□□□ 0.22
EFEMP1-211ENST00000480016 EIF4G3O43432 1585 aaKnown RBP16.41■□□□□ 0.22
EFEMP1-211ENST00000480016 PEG3Q9GZU2 1588 aa16.38■□□□□ 0.21
EFEMP1-211ENST00000480016 FAM69CQ0P6D2 419 aa16.37■□□□□ 0.21
EFEMP1-211ENST00000480016 AQRO60306 1485 aaKnown RBP eCLIP16.35■□□□□ 0.21
EFEMP1-211ENST00000480016 DCAF8L1A6NGE4 600 aa16.34■□□□□ 0.21
EFEMP1-211ENST00000480016 CERKQ8TCT0 537 aa16.31■□□□□ 0.2
EFEMP1-211ENST00000480016 ABCC10Q5T3U5 1492 aa16.25■□□□□ 0.19
EFEMP1-211ENST00000480016 SYNJ1O43426 1573 aa16.21■□□□□ 0.19
EFEMP1-211ENST00000480016 CFTRP13569 1480 aa16.19■□□□□ 0.18
EFEMP1-211ENST00000480016 NPM3O75607 178 aaKnown RBP16.16■□□□□ 0.18
EFEMP1-211ENST00000480016 CHMP7Q8WUX9 453 aaPredicted RBP16.16■□□□□ 0.18
EFEMP1-211ENST00000480016 DIP2BQ9P265 1576 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms