RNA–Protein interactions for RNA: ENST00000479678.1

RPP30-207, Transcript of ribonuclease P/MRP subunit p30, humanhuman

TSL 2

Gene RPP30, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP30-207ENST00000479678 AEBP2Q6ZN18 517 aaPredicted RBP27.31■■□□□ 1.96
RPP30-207ENST00000479678 CHIC1Q5VXU3 224 aa25.54■■□□□ 1.68
RPP30-207ENST00000479678 SENP3Q9H4L4 574 aaPredicted RBP23.45■■□□□ 1.34
RPP30-207ENST00000479678 PHF23Q9BUL5 403 aaPredicted RBP23■■□□□ 1.27
RPP30-207ENST00000479678 NISCHQ9Y2I1 1504 aa22.36■■□□□ 1.17
RPP30-207ENST00000479678 POTEDQ86YR6 584 aa22.21■■□□□ 1.15
RPP30-207ENST00000479678 FOXD1Q16676 465 aa21.95■■□□□ 1.1
RPP30-207ENST00000479678 MSH5O43196 834 aa20.99■□□□□ 0.95
RPP30-207ENST00000479678 PIAS4Q8N2W9 510 aaPredicted RBP20.28■□□□□ 0.84
RPP30-207ENST00000479678 CCDC180Q9P1Z9 1646 aa20.1■□□□□ 0.81
RPP30-207ENST00000479678 PLPPR3Q6T4P5 718 aa20.02■□□□□ 0.8
RPP30-207ENST00000479678 PPP6R1Q9UPN7 881 aa19.98■□□□□ 0.79
RPP30-207ENST00000479678 ADRA2BP18089 450 aa19.85■□□□□ 0.77
RPP30-207ENST00000479678 ABCC9O60706 1549 aa19.72■□□□□ 0.75
RPP30-207ENST00000479678 RB1CC1Q8TDY2 1594 aa19■□□□□ 0.63
RPP30-207ENST00000479678 NACADO15069 1562 aa18.93■□□□□ 0.62
RPP30-207ENST00000479678 MYO15BQ96JP2 1530 aa18.78■□□□□ 0.6
RPP30-207ENST00000479678 DCAF8L2P0C7V8 631 aa18.65■□□□□ 0.58
RPP30-207ENST00000479678 CACNB1Q02641 598 aaPredicted RBP18.64■□□□□ 0.57
RPP30-207ENST00000479678 ZCCHC6Q5VYS8 1495 aaKnown RBP18.6■□□□□ 0.57
RPP30-207ENST00000479678 DCAF1Q9Y4B6 1507 aa18.59■□□□□ 0.57
RPP30-207ENST00000479678 UNC13AQ9UPW8 1703 aa18.49■□□□□ 0.55
RPP30-207ENST00000479678 DMRT2Q9Y5R5 561 aa18.49■□□□□ 0.55
RPP30-207ENST00000479678 MAPK8IP2Q13387 824 aaPredicted RBP18.4■□□□□ 0.54
RPP30-207ENST00000479678 BICRAQ9NZM4 1560 aa18.34■□□□□ 0.53
RPP30-207ENST00000479678 SHROOM4Q9ULL8 1493 aa18.33■□□□□ 0.52
RPP30-207ENST00000479678 PABPN1Q86U42 306 aaKnown RBP eCLIP18.31■□□□□ 0.52
RPP30-207ENST00000479678 SCAF1Q9H7N4 1312 aaKnown RBP18.23■□□□□ 0.51
RPP30-207ENST00000479678 DNAJC5BQ9UF47 199 aa18.19■□□□□ 0.5
RPP30-207ENST00000479678 SCRIBQ14160 1630 aa18.19■□□□□ 0.5
RPP30-207ENST00000479678 EIF4G1Q04637 1599 aaKnown RBP17.91■□□□□ 0.46
RPP30-207ENST00000479678 CC2D2AQ9P2K1 1620 aa17.88■□□□□ 0.45
RPP30-207ENST00000479678 CECR2Q9BXF3 1484 aa17.8■□□□□ 0.44
RPP30-207ENST00000479678 RNF39Q9H2S5 420 aa17.78■□□□□ 0.44
RPP30-207ENST00000479678 DCAF8L1A6NGE4 600 aa17.74■□□□□ 0.43
RPP30-207ENST00000479678 HOXD11P31277 338 aaPredicted RBP17.6■□□□□ 0.41
RPP30-207ENST00000479678 C1QBPQ07021 282 aaKnown RBP17.49■□□□□ 0.39
RPP30-207ENST00000479678 PPP4R3CPQ6ZMV5 832 aa17.45■□□□□ 0.38
RPP30-207ENST00000479678 SMARCA4P51532 1647 aa17.43■□□□□ 0.38
RPP30-207ENST00000479678 NCAPD3P42695 1498 aa17.42■□□□□ 0.38
RPP30-207ENST00000479678 SMARCA2P51531 1590 aa17.41■□□□□ 0.38
RPP30-207ENST00000479678 BAZ1AQ9NRL2 1556 aaPredicted RBP17.4■□□□□ 0.38
RPP30-207ENST00000479678 HMGXB3Q12766 1538 aa17.37■□□□□ 0.37
RPP30-207ENST00000479678 ATAD2BQ9ULI0 1458 aa17.36■□□□□ 0.37
RPP30-207ENST00000479678 RNF216Q9NWF9 866 aaPredicted RBP17.3■□□□□ 0.36
RPP30-207ENST00000479678 PEG3Q9GZU2 1588 aa17.3■□□□□ 0.36
RPP30-207ENST00000479678 CNKSR2Q8WXI2 1034 aa17.29■□□□□ 0.36
RPP30-207ENST00000479678 BAZ1BQ9UIG0 1483 aaKnown RBP17.24■□□□□ 0.35
RPP30-207ENST00000479678 POTEHQ6S545 545 aa17.22■□□□□ 0.35
RPP30-207ENST00000479678 MROH2BQ7Z745 1585 aa17.18■□□□□ 0.34
RPP30-207ENST00000479678 ERCC6Q03468 1493 aa17.1■□□□□ 0.33
RPP30-207ENST00000479678 CUX2O14529 1486 aa17.05■□□□□ 0.32
RPP30-207ENST00000479678 LAMC3Q9Y6N6 1575 aa17.05■□□□□ 0.32
RPP30-207ENST00000479678 WIZO95785 1651 aa16.98■□□□□ 0.31
RPP30-207ENST00000479678 NESP48681 1621 aa16.96■□□□□ 0.31
RPP30-207ENST00000479678 PDS5BQ9NTI5 1447 aa16.92■□□□□ 0.3
RPP30-207ENST00000479678 RSF1Q96T23 1441 aaPredicted RBP16.9■□□□□ 0.3
RPP30-207ENST00000479678 CADPSQ9ULU8 1353 aa16.88■□□□□ 0.29
RPP30-207ENST00000479678 TOP2AP11388 1531 aaKnown RBP16.87■□□□□ 0.29
RPP30-207ENST00000479678 THOC2Q8NI27 1593 aaKnown RBP16.86■□□□□ 0.29
RPP30-207ENST00000479678 KIF21AQ7Z4S6 1674 aa16.84■□□□□ 0.29
RPP30-207ENST00000479678 CFTRP13569 1480 aa16.74■□□□□ 0.27
RPP30-207ENST00000479678 MRC2Q9UBG0 1479 aa16.74■□□□□ 0.27
RPP30-207ENST00000479678 CEP164Q9UPV0 1460 aa16.73■□□□□ 0.27
RPP30-207ENST00000479678 WDR62O43379 1518 aa16.7■□□□□ 0.26
RPP30-207ENST00000479678 DNAJC5Q9H3Z4 198 aa16.69■□□□□ 0.26
RPP30-207ENST00000479678 FANCD2Q9BXW9 1451 aa16.68■□□□□ 0.26
RPP30-207ENST00000479678 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.68■□□□□ 0.26
RPP30-207ENST00000479678 PRDM2Q13029 1718 aa16.67■□□□□ 0.26
RPP30-207ENST00000479678 NCBP3Q53F19 620 aaKnown RBP16.62■□□□□ 0.25
RPP30-207ENST00000479678 CCDC88BA6NC98 1476 aa16.59■□□□□ 0.25
RPP30-207ENST00000479678 URB2Q14146 1524 aaKnown RBP16.5■□□□□ 0.23
RPP30-207ENST00000479678 ABCC8Q09428 1581 aa16.47■□□□□ 0.23
RPP30-207ENST00000479678 DNMBPQ6XZF7 1577 aa16.39■□□□□ 0.21
RPP30-207ENST00000479678 IFT140Q96RY7 1462 aa16.39■□□□□ 0.21
RPP30-207ENST00000479678 TOPBP1Q92547 1522 aa16.39■□□□□ 0.21
RPP30-207ENST00000479678 NPM3O75607 178 aaKnown RBP16.36■□□□□ 0.21
RPP30-207ENST00000479678 DSG3P32926 999 aa16.3■□□□□ 0.2
RPP30-207ENST00000479678 U3KPZ7 1027 aaPredicted RBP16.29■□□□□ 0.2
RPP30-207ENST00000479678 EIF4G3O43432 1585 aaKnown RBP16.24■□□□□ 0.19
RPP30-207ENST00000479678 WDR97A6NE52 1622 aa16.23■□□□□ 0.19
RPP30-207ENST00000479678 TARBP1Q13395 1621 aaKnown RBP16.23■□□□□ 0.19
RPP30-207ENST00000479678 POLA1P09884 1462 aaPredicted RBP16.23■□□□□ 0.19
RPP30-207ENST00000479678 ZNF608Q9ULD9 1512 aaPredicted RBP16.23■□□□□ 0.19
RPP30-207ENST00000479678 OSCARQ8IYS5 282 aa16.22■□□□□ 0.19
RPP30-207ENST00000479678 SUPT5HO00267 1087 aaKnown RBP16.2■□□□□ 0.18
RPP30-207ENST00000479678 SPINK5Q9NQ38 1064 aaPredicted RBP16.2■□□□□ 0.18
RPP30-207ENST00000479678 CAPN15O75808 1086 aa16.19■□□□□ 0.18
RPP30-207ENST00000479678 FGD5Q6ZNL6 1462 aa16.15■□□□□ 0.18
RPP30-207ENST00000479678 CUX1P39880 1505 aa16.14■□□□□ 0.18
RPP30-207ENST00000479678 SOGA1O94964 1423 aa16.14■□□□□ 0.17
RPP30-207ENST00000479678 AQRO60306 1485 aaKnown RBP eCLIP16.1■□□□□ 0.17
RPP30-207ENST00000479678 RAD54L2Q9Y4B4 1467 aa16.09■□□□□ 0.17
RPP30-207ENST00000479678 CHD1O14646 1710 aa16.06■□□□□ 0.16
RPP30-207ENST00000479678 MAGI1Q96QZ7 1491 aaPredicted RBP16.05■□□□□ 0.16
RPP30-207ENST00000479678 GRIN2BQ13224 1484 aa16.03■□□□□ 0.16
RPP30-207ENST00000479678 TDRD9Q8NDG6 1382 aaKnown RBP16.03■□□□□ 0.16
RPP30-207ENST00000479678 ABCA10Q8WWZ4 1543 aa16.02■□□□□ 0.15
RPP30-207ENST00000479678 BIVM-ERCC5R4GMW8 1640 aa16.01■□□□□ 0.15
RPP30-207ENST00000479678 SNAPC4Q5SXM2 1469 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms