RNA–Protein interactions for RNA: ENST00000478720.1

ITSN2-211, Transcript of intersectin 2, humanhuman

TSL 2

Gene ITSN2, Length 2,035 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN2-211ENST00000478720 NISCHQ9Y2I1 1504 aa31.77■■■□□ 2.68
ITSN2-211ENST00000478720 CCDC180Q9P1Z9 1646 aa27.25■■□□□ 1.95
ITSN2-211ENST00000478720 ZCCHC6Q5VYS8 1495 aaKnown RBP26.86■■□□□ 1.89
ITSN2-211ENST00000478720 SHROOM4Q9ULL8 1493 aa26.65■■□□□ 1.86
ITSN2-211ENST00000478720 DCAF1Q9Y4B6 1507 aa26.2■■□□□ 1.79
ITSN2-211ENST00000478720 SUPT5HO00267 1087 aaKnown RBP26.05■■□□□ 1.76
ITSN2-211ENST00000478720 DCAF8L2P0C7V8 631 aa26.03■■□□□ 1.76
ITSN2-211ENST00000478720 MYO15BQ96JP2 1530 aa25.57■■□□□ 1.68
ITSN2-211ENST00000478720 CHIC1Q5VXU3 224 aa25.37■■□□□ 1.65
ITSN2-211ENST00000478720 ABCC9O60706 1549 aa25.33■■□□□ 1.64
ITSN2-211ENST00000478720 SCRIBQ14160 1630 aa25.28■■□□□ 1.64
ITSN2-211ENST00000478720 NACADO15069 1562 aa25.16■■□□□ 1.62
ITSN2-211ENST00000478720 RSF1Q96T23 1441 aaPredicted RBP25.01■■□□□ 1.59
ITSN2-211ENST00000478720 RB1CC1Q8TDY2 1594 aa24.78■■□□□ 1.56
ITSN2-211ENST00000478720 CECR2Q9BXF3 1484 aa24.68■■□□□ 1.54
ITSN2-211ENST00000478720 MROH2BQ7Z745 1585 aa24.62■■□□□ 1.53
ITSN2-211ENST00000478720 LOC105371045A0A1W2PR82 267 aa24.49■■□□□ 1.51
ITSN2-211ENST00000478720 WIZO95785 1651 aa24.49■■□□□ 1.51
ITSN2-211ENST00000478720 BAZ1AQ9NRL2 1556 aaPredicted RBP24.43■■□□□ 1.5
ITSN2-211ENST00000478720 UNC13AQ9UPW8 1703 aa24.39■■□□□ 1.49
ITSN2-211ENST00000478720 TRIM41Q8WV44 630 aa24.37■■□□□ 1.49
ITSN2-211ENST00000478720 HRCP23327 699 aa24.28■■□□□ 1.48
ITSN2-211ENST00000478720 PCGF6Q9BYE7 350 aa24.28■■□□□ 1.48
ITSN2-211ENST00000478720 SMARCA4P51532 1647 aa24.25■■□□□ 1.47
ITSN2-211ENST00000478720 EIF4G1Q04637 1599 aaKnown RBP24.21■■□□□ 1.47
ITSN2-211ENST00000478720 TOP2AP11388 1531 aaKnown RBP24.19■■□□□ 1.46
ITSN2-211ENST00000478720 BICRAQ9NZM4 1560 aa24.07■■□□□ 1.44
ITSN2-211ENST00000478720 FAM9AQ8IZU1 332 aaPredicted RBP24.03■■□□□ 1.44
ITSN2-211ENST00000478720 SMARCA2P51531 1590 aa24.02■■□□□ 1.44
ITSN2-211ENST00000478720 TRIM26Q12899 539 aaPredicted RBP24■■□□□ 1.43
ITSN2-211ENST00000478720 CCDC88BA6NC98 1476 aa24■■□□□ 1.43
ITSN2-211ENST00000478720 PEG3Q9GZU2 1588 aa23.87■■□□□ 1.41
ITSN2-211ENST00000478720 PABPN1Q86U42 306 aaKnown RBP eCLIP23.87■■□□□ 1.41
ITSN2-211ENST00000478720 ABCC8Q09428 1581 aa23.82■■□□□ 1.4
ITSN2-211ENST00000478720 EHMT2Q96KQ7 1210 aa23.71■■□□□ 1.39
ITSN2-211ENST00000478720 PPARGC1BQ86YN6 1023 aaKnown RBP23.65■■□□□ 1.38
ITSN2-211ENST00000478720 ATAD2BQ9ULI0 1458 aa23.63■■□□□ 1.37
ITSN2-211ENST00000478720 EEA1Q15075 1411 aa23.57■■□□□ 1.36
ITSN2-211ENST00000478720 SOGA1O94964 1423 aa23.54■■□□□ 1.36
ITSN2-211ENST00000478720 BAZ1BQ9UIG0 1483 aaKnown RBP23.53■■□□□ 1.36
ITSN2-211ENST00000478720 WRNQ14191 1432 aaPredicted RBP eCLIP23.49■■□□□ 1.35
ITSN2-211ENST00000478720 ZEB1P37275 1124 aaPredicted RBP23.45■■□□□ 1.35
ITSN2-211ENST00000478720 TNIKQ9UKE5 1360 aa23.43■■□□□ 1.34
ITSN2-211ENST00000478720 RUSC2Q8N2Y8 1516 aa23.43■■□□□ 1.34
ITSN2-211ENST00000478720 CSRNP3Q8WYN3 585 aa23.41■■□□□ 1.34
ITSN2-211ENST00000478720 SYNJ1O43426 1573 aa23.41■■□□□ 1.34
ITSN2-211ENST00000478720 CEP162Q5TB80 1403 aa23.4■■□□□ 1.34
ITSN2-211ENST00000478720 GOLGA3Q08378 1498 aa23.33■■□□□ 1.32
ITSN2-211ENST00000478720 HMGXB3Q12766 1538 aa23.28■■□□□ 1.32
ITSN2-211ENST00000478720 KIF21BO75037 1637 aa23.26■■□□□ 1.31
ITSN2-211ENST00000478720 NCAPD3P42695 1498 aa23.24■■□□□ 1.31
ITSN2-211ENST00000478720 CEP164Q9UPV0 1460 aa23.22■■□□□ 1.31
ITSN2-211ENST00000478720 UBTFP17480 764 aaKnown RBP23.21■■□□□ 1.31
ITSN2-211ENST00000478720 TOP2BQ02880 1626 aa23.19■■□□□ 1.3
ITSN2-211ENST00000478720 BIVM-ERCC5R4GMW8 1640 aa23.16■■□□□ 1.3
ITSN2-211ENST00000478720 RAPGEF2Q9Y4G8 1499 aa23.01■■□□□ 1.27
ITSN2-211ENST00000478720 CLIP1P30622 1438 aa23■■□□□ 1.27
ITSN2-211ENST00000478720 CFTRP13569 1480 aa22.99■■□□□ 1.27
ITSN2-211ENST00000478720 CUX1P39880 1505 aa22.96■■□□□ 1.27
ITSN2-211ENST00000478720 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.96■■□□□ 1.27
ITSN2-211ENST00000478720 TTBK1Q5TCY1 1321 aaPredicted RBP22.93■■□□□ 1.26
ITSN2-211ENST00000478720 ERICH3Q5RHP9 1530 aa22.93■■□□□ 1.26
ITSN2-211ENST00000478720 PRDM2Q13029 1718 aa22.92■■□□□ 1.26
ITSN2-211ENST00000478720 CCER1Q8TC90 406 aaPredicted RBP22.92■■□□□ 1.26
ITSN2-211ENST00000478720 VPS8Q8N3P4 1428 aa22.92■■□□□ 1.26
ITSN2-211ENST00000478720 PRXQ9BXM0 1461 aa22.89■■□□□ 1.26
ITSN2-211ENST00000478720 KIF27Q86VH2 1401 aa22.8■■□□□ 1.24
ITSN2-211ENST00000478720 CADPSQ9ULU8 1353 aa22.72■■□□□ 1.23
ITSN2-211ENST00000478720 CC2D2AQ9P2K1 1620 aa22.7■■□□□ 1.22
ITSN2-211ENST00000478720 ARAP1Q96P48 1450 aa22.7■■□□□ 1.22
ITSN2-211ENST00000478720 APLP2Q06481 763 aa22.69■■□□□ 1.22
ITSN2-211ENST00000478720 RANGAP1P46060 587 aaPredicted RBP22.64■■□□□ 1.21
ITSN2-211ENST00000478720 CUX2O14529 1486 aa22.58■■□□□ 1.21
ITSN2-211ENST00000478720 FGD5Q6ZNL6 1462 aa22.56■■□□□ 1.2
ITSN2-211ENST00000478720 HNRNPUL2Q1KMD3 747 aaKnown RBP22.55■■□□□ 1.2
ITSN2-211ENST00000478720 IGF1RP08069 1367 aa22.54■■□□□ 1.2
ITSN2-211ENST00000478720 ARHGAP35Q9NRY4 1499 aa22.52■■□□□ 1.2
ITSN2-211ENST00000478720 FANCD2Q9BXW9 1451 aa22.5■■□□□ 1.19
ITSN2-211ENST00000478720 DNMBPQ6XZF7 1577 aa22.44■■□□□ 1.18
ITSN2-211ENST00000478720 CARMIL1Q5VZK9 1371 aa22.44■■□□□ 1.18
ITSN2-211ENST00000478720 KANK4Q5T7N3 995 aaPredicted RBP22.41■■□□□ 1.18
ITSN2-211ENST00000478720 DIEXFQ68CQ4 756 aaKnown RBP22.39■■□□□ 1.17
ITSN2-211ENST00000478720 RRBP1Q9P2E9 1410 aaKnown RBP22.39■■□□□ 1.17
ITSN2-211ENST00000478720 TOPBP1Q92547 1522 aa22.36■■□□□ 1.17
ITSN2-211ENST00000478720 ABCA10Q8WWZ4 1543 aa22.35■■□□□ 1.17
ITSN2-211ENST00000478720 MAP3K1Q13233 1512 aa22.33■■□□□ 1.17
ITSN2-211ENST00000478720 ZNF316A6NFI3 1004 aaPredicted RBP22.33■■□□□ 1.16
ITSN2-211ENST00000478720 POLA1P09884 1462 aaPredicted RBP22.32■■□□□ 1.16
ITSN2-211ENST00000478720 NESP48681 1621 aa22.32■■□□□ 1.16
ITSN2-211ENST00000478720 LAMC3Q9Y6N6 1575 aa22.3■■□□□ 1.16
ITSN2-211ENST00000478720 RAD54L2Q9Y4B4 1467 aa22.3■■□□□ 1.16
ITSN2-211ENST00000478720 TIAM1Q13009 1591 aa22.28■■□□□ 1.16
ITSN2-211ENST00000478720 CLSPNQ9HAW4 1339 aa22.27■■□□□ 1.15
ITSN2-211ENST00000478720 CUL7Q14999 1698 aa22.25■■□□□ 1.15
ITSN2-211ENST00000478720 CCNB3Q8WWL7 1395 aa22.24■■□□□ 1.15
ITSN2-211ENST00000478720 DHX57Q6P158 1386 aaKnown RBP22.23■■□□□ 1.15
ITSN2-211ENST00000478720 WDR97A6NE52 1622 aa22.23■■□□□ 1.15
ITSN2-211ENST00000478720 FHAD1B1AJZ9 1412 aa22.21■■□□□ 1.15
ITSN2-211ENST00000478720 URB2Q14146 1524 aaKnown RBP22.19■■□□□ 1.14
ITSN2-211ENST00000478720 CFAP43Q8NDM7 1665 aa22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 120.6 ms