RNA–Protein interactions for RNA: ENST00000478660.6

RUNX2-207, Transcript of runt related transcription factor 2, humanhuman

TSL 5

Gene RUNX2, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX2-207ENST00000478660 NISCHQ9Y2I1 1504 aa47.09■■■■■ 5.13
RUNX2-207ENST00000478660 CCDC180Q9P1Z9 1646 aa41.64■■■■■ 4.26
RUNX2-207ENST00000478660 SHROOM4Q9ULL8 1493 aa40.18■■■■■ 4.02
RUNX2-207ENST00000478660 ABCC9O60706 1549 aa40.04■■■■■ 4
RUNX2-207ENST00000478660 ZCCHC6Q5VYS8 1495 aaKnown RBP39.95■■■■□ 3.99
RUNX2-207ENST00000478660 SUPT5HO00267 1087 aaKnown RBP39.62■■■■□ 3.93
RUNX2-207ENST00000478660 DCAF1Q9Y4B6 1507 aa38.99■■■■□ 3.83
RUNX2-207ENST00000478660 NACADO15069 1562 aa38.96■■■■□ 3.83
RUNX2-207ENST00000478660 MYO15BQ96JP2 1530 aa38.94■■■■□ 3.82
RUNX2-207ENST00000478660 DCAF8L2P0C7V8 631 aa38.93■■■■□ 3.82
RUNX2-207ENST00000478660 CHIC1Q5VXU3 224 aa38.88■■■■□ 3.81
RUNX2-207ENST00000478660 RB1CC1Q8TDY2 1594 aa38.87■■■■□ 3.81
RUNX2-207ENST00000478660 HRCP23327 699 aa38.49■■■■□ 3.75
RUNX2-207ENST00000478660 PCGF6Q9BYE7 350 aa38.02■■■■□ 3.68
RUNX2-207ENST00000478660 UNC13AQ9UPW8 1703 aa38■■■■□ 3.67
RUNX2-207ENST00000478660 SCRIBQ14160 1630 aa37.97■■■■□ 3.67
RUNX2-207ENST00000478660 BICRAQ9NZM4 1560 aa37.63■■■■□ 3.61
RUNX2-207ENST00000478660 LOC105371045A0A1W2PR82 267 aa37.61■■■■□ 3.61
RUNX2-207ENST00000478660 PABPN1Q86U42 306 aaKnown RBP eCLIP37.46■■■■□ 3.59
RUNX2-207ENST00000478660 PPARGC1BQ86YN6 1023 aaKnown RBP37.43■■■■□ 3.58
RUNX2-207ENST00000478660 RSF1Q96T23 1441 aaPredicted RBP37.38■■■■□ 3.57
RUNX2-207ENST00000478660 TRIM26Q12899 539 aaPredicted RBP37.35■■■■□ 3.57
RUNX2-207ENST00000478660 TRIM41Q8WV44 630 aa36.96■■■■□ 3.51
RUNX2-207ENST00000478660 ZEB1P37275 1124 aaPredicted RBP36.81■■■■□ 3.48
RUNX2-207ENST00000478660 EIF4G1Q04637 1599 aaKnown RBP36.59■■■■□ 3.45
RUNX2-207ENST00000478660 CECR2Q9BXF3 1484 aa36.59■■■■□ 3.45
RUNX2-207ENST00000478660 MROH2BQ7Z745 1585 aa36.57■■■■□ 3.44
RUNX2-207ENST00000478660 FAM9AQ8IZU1 332 aaPredicted RBP36.53■■■■□ 3.44
RUNX2-207ENST00000478660 BAZ1AQ9NRL2 1556 aaPredicted RBP36.44■■■■□ 3.42
RUNX2-207ENST00000478660 WIZO95785 1651 aa36.42■■■■□ 3.42
RUNX2-207ENST00000478660 SMARCA4P51532 1647 aa36.39■■■■□ 3.42
RUNX2-207ENST00000478660 CC2D2AQ9P2K1 1620 aa36.3■■■■□ 3.4
RUNX2-207ENST00000478660 DNAJC5BQ9UF47 199 aa36.12■■■■□ 3.37
RUNX2-207ENST00000478660 EHMT2Q96KQ7 1210 aa36.09■■■■□ 3.37
RUNX2-207ENST00000478660 SMARCA2P51531 1590 aa36.04■■■■□ 3.36
RUNX2-207ENST00000478660 PEG3Q9GZU2 1588 aa36.04■■■■□ 3.36
RUNX2-207ENST00000478660 ATAD2BQ9ULI0 1458 aa36■■■■□ 3.35
RUNX2-207ENST00000478660 TOP2AP11388 1531 aaKnown RBP35.93■■■■□ 3.34
RUNX2-207ENST00000478660 NCAPD3P42695 1498 aa35.9■■■■□ 3.34
RUNX2-207ENST00000478660 HMGXB3Q12766 1538 aa35.83■■■■□ 3.33
RUNX2-207ENST00000478660 BAZ1BQ9UIG0 1483 aaKnown RBP35.76■■■■□ 3.32
RUNX2-207ENST00000478660 WRNQ14191 1432 aaPredicted RBP eCLIP35.75■■■■□ 3.31
RUNX2-207ENST00000478660 ABCC8Q09428 1581 aa35.71■■■■□ 3.31
RUNX2-207ENST00000478660 CCDC88BA6NC98 1476 aa35.7■■■■□ 3.31
RUNX2-207ENST00000478660 SCAF1Q9H7N4 1312 aaKnown RBP35.67■■■■□ 3.3
RUNX2-207ENST00000478660 PELP1Q8IZL8 1130 aaKnown RBP35.67■■■■□ 3.3
RUNX2-207ENST00000478660 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.61■■■■□ 3.29
RUNX2-207ENST00000478660 CCER1Q8TC90 406 aaPredicted RBP35.61■■■■□ 3.29
RUNX2-207ENST00000478660 CEP162Q5TB80 1403 aa35.55■■■■□ 3.28
RUNX2-207ENST00000478660 EEA1Q15075 1411 aa35.52■■■■□ 3.28
RUNX2-207ENST00000478660 TNIKQ9UKE5 1360 aa35.51■■■■□ 3.28
RUNX2-207ENST00000478660 SOGA1O94964 1423 aa35.44■■■■□ 3.26
RUNX2-207ENST00000478660 CSRNP3Q8WYN3 585 aa35.29■■■■□ 3.24
RUNX2-207ENST00000478660 ACIN1Q9UKV3 1341 aaKnown RBP35.25■■■■□ 3.23
RUNX2-207ENST00000478660 GOLGA3Q08378 1498 aa35.24■■■■□ 3.23
RUNX2-207ENST00000478660 RUSC2Q8N2Y8 1516 aa35.23■■■■□ 3.23
RUNX2-207ENST00000478660 DIEXFQ68CQ4 756 aaKnown RBP35.19■■■■□ 3.22
RUNX2-207ENST00000478660 UBTFP17480 764 aaKnown RBP35.1■■■■□ 3.21
RUNX2-207ENST00000478660 TTBK1Q5TCY1 1321 aaPredicted RBP35.1■■■■□ 3.21
RUNX2-207ENST00000478660 NEUROD1Q13562 356 aa35.09■■■■□ 3.21
RUNX2-207ENST00000478660 KIF21BO75037 1637 aa35.04■■■■□ 3.2
RUNX2-207ENST00000478660 CENPBP07199 599 aaPredicted RBP35.01■■■■□ 3.19
RUNX2-207ENST00000478660 CEP164Q9UPV0 1460 aa35■■■■□ 3.19
RUNX2-207ENST00000478660 SYNJ1O43426 1573 aa34.94■■■■□ 3.18
RUNX2-207ENST00000478660 LAMC3Q9Y6N6 1575 aa34.91■■■■□ 3.18
RUNX2-207ENST00000478660 CADPSQ9ULU8 1353 aa34.87■■■■□ 3.17
RUNX2-207ENST00000478660 ZNF316A6NFI3 1004 aaPredicted RBP34.87■■■■□ 3.17
RUNX2-207ENST00000478660 NESP48681 1621 aa34.82■■■■□ 3.16
RUNX2-207ENST00000478660 CFTRP13569 1480 aa34.8■■■■□ 3.16
RUNX2-207ENST00000478660 CLIP1P30622 1438 aa34.79■■■■□ 3.16
RUNX2-207ENST00000478660 GTF3C3Q9Y5Q9 886 aa34.78■■■■□ 3.16
RUNX2-207ENST00000478660 VPS8Q8N3P4 1428 aa34.75■■■■□ 3.15
RUNX2-207ENST00000478660 PRDM2Q13029 1718 aa34.71■■■■□ 3.15
RUNX2-207ENST00000478660 PDS5BQ9NTI5 1447 aa34.61■■■■□ 3.13
RUNX2-207ENST00000478660 RAPGEF2Q9Y4G8 1499 aa34.59■■■■□ 3.13
RUNX2-207ENST00000478660 HNRNPUL2Q1KMD3 747 aaKnown RBP34.56■■■■□ 3.12
RUNX2-207ENST00000478660 TOP2BQ02880 1626 aa34.54■■■■□ 3.12
RUNX2-207ENST00000478660 KIF21AQ7Z4S6 1674 aa34.5■■■■□ 3.11
RUNX2-207ENST00000478660 ERCC6Q03468 1493 aa34.5■■■■□ 3.11
RUNX2-207ENST00000478660 FANCD2Q9BXW9 1451 aa34.49■■■■□ 3.11
RUNX2-207ENST00000478660 APLP2Q06481 763 aa34.48■■■■□ 3.11
RUNX2-207ENST00000478660 BIVM-ERCC5R4GMW8 1640 aa34.46■■■■□ 3.11
RUNX2-207ENST00000478660 ERICH3Q5RHP9 1530 aa34.4■■■■□ 3.1
RUNX2-207ENST00000478660 MIER1Q8N108 512 aa34.35■■■■□ 3.09
RUNX2-207ENST00000478660 PRXQ9BXM0 1461 aa34.29■■■■□ 3.08
RUNX2-207ENST00000478660 CLSPNQ9HAW4 1339 aa34.28■■■■□ 3.08
RUNX2-207ENST00000478660 YTHDC1Q96MU7 727 aaKnown RBP34.25■■■■□ 3.07
RUNX2-207ENST00000478660 THOC2Q8NI27 1593 aaKnown RBP34.24■■■■□ 3.07
RUNX2-207ENST00000478660 MRC2Q9UBG0 1479 aa34.24■■■■□ 3.07
RUNX2-207ENST00000478660 ARAP1Q96P48 1450 aa34.22■■■■□ 3.07
RUNX2-207ENST00000478660 DHX57Q6P158 1386 aaKnown RBP34.13■■■■□ 3.05
RUNX2-207ENST00000478660 WDR62O43379 1518 aa34.12■■■■□ 3.05
RUNX2-207ENST00000478660 RANGAP1P46060 587 aaPredicted RBP34.12■■■■□ 3.05
RUNX2-207ENST00000478660 URB2Q14146 1524 aaKnown RBP34.1■■■■□ 3.05
RUNX2-207ENST00000478660 DNMBPQ6XZF7 1577 aa34.06■■■■□ 3.04
RUNX2-207ENST00000478660 RRBP1Q9P2E9 1410 aaKnown RBP34.04■■■■□ 3.04
RUNX2-207ENST00000478660 CUX1P39880 1505 aa34.04■■■■□ 3.04
RUNX2-207ENST00000478660 MYT1Q01538 1121 aa34.02■■■■□ 3.04
RUNX2-207ENST00000478660 TOPBP1Q92547 1522 aa34.01■■■■□ 3.04
RUNX2-207ENST00000478660 KIF27Q86VH2 1401 aa33.98■■■■□ 3.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms