RNA–Protein interactions for RNA: ENST00000478250.1

NR4A1-205, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 1 (best)

Gene NR4A1, Length 1,820 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-205ENST00000478250 NISCHQ9Y2I1 1504 aa31.4■■■□□ 2.62
NR4A1-205ENST00000478250 CCDC180Q9P1Z9 1646 aa27.48■■□□□ 1.99
NR4A1-205ENST00000478250 ZCCHC6Q5VYS8 1495 aaKnown RBP26.52■■□□□ 1.84
NR4A1-205ENST00000478250 ABCC9O60706 1549 aa26.48■■□□□ 1.83
NR4A1-205ENST00000478250 DCAF1Q9Y4B6 1507 aa26■■□□□ 1.75
NR4A1-205ENST00000478250 DCAF8L2P0C7V8 631 aa25.95■■□□□ 1.74
NR4A1-205ENST00000478250 SHROOM4Q9ULL8 1493 aa25.91■■□□□ 1.74
NR4A1-205ENST00000478250 NACADO15069 1562 aa25.74■■□□□ 1.71
NR4A1-205ENST00000478250 MYO15BQ96JP2 1530 aa25.73■■□□□ 1.71
NR4A1-205ENST00000478250 RB1CC1Q8TDY2 1594 aa25.66■■□□□ 1.7
NR4A1-205ENST00000478250 SCRIBQ14160 1630 aa25.15■■□□□ 1.62
NR4A1-205ENST00000478250 SUPT5HO00267 1087 aaKnown RBP25.14■■□□□ 1.62
NR4A1-205ENST00000478250 UNC13AQ9UPW8 1703 aa25.05■■□□□ 1.6
NR4A1-205ENST00000478250 PABPN1Q86U42 306 aaKnown RBP eCLIP24.85■■□□□ 1.57
NR4A1-205ENST00000478250 BICRAQ9NZM4 1560 aa24.85■■□□□ 1.57
NR4A1-205ENST00000478250 RSF1Q96T23 1441 aaPredicted RBP24.55■■□□□ 1.52
NR4A1-205ENST00000478250 CHIC1Q5VXU3 224 aa24.39■■□□□ 1.49
NR4A1-205ENST00000478250 CECR2Q9BXF3 1484 aa24.35■■□□□ 1.49
NR4A1-205ENST00000478250 MROH2BQ7Z745 1585 aa24.29■■□□□ 1.48
NR4A1-205ENST00000478250 BAZ1AQ9NRL2 1556 aaPredicted RBP24.22■■□□□ 1.47
NR4A1-205ENST00000478250 EIF4G1Q04637 1599 aaKnown RBP24.17■■□□□ 1.46
NR4A1-205ENST00000478250 WIZO95785 1651 aa24.13■■□□□ 1.45
NR4A1-205ENST00000478250 SMARCA4P51532 1647 aa24.09■■□□□ 1.45
NR4A1-205ENST00000478250 HRCP23327 699 aa24.07■■□□□ 1.44
NR4A1-205ENST00000478250 CC2D2AQ9P2K1 1620 aa23.95■■□□□ 1.43
NR4A1-205ENST00000478250 TOP2AP11388 1531 aaKnown RBP23.9■■□□□ 1.42
NR4A1-205ENST00000478250 DNAJC5BQ9UF47 199 aa23.86■■□□□ 1.41
NR4A1-205ENST00000478250 ATAD2BQ9ULI0 1458 aa23.85■■□□□ 1.41
NR4A1-205ENST00000478250 SMARCA2P51531 1590 aa23.84■■□□□ 1.41
NR4A1-205ENST00000478250 PEG3Q9GZU2 1588 aa23.83■■□□□ 1.4
NR4A1-205ENST00000478250 PELP1Q8IZL8 1130 aaKnown RBP23.77■■□□□ 1.4
NR4A1-205ENST00000478250 NCAPD3P42695 1498 aa23.75■■□□□ 1.39
NR4A1-205ENST00000478250 BAZ1BQ9UIG0 1483 aaKnown RBP23.69■■□□□ 1.38
NR4A1-205ENST00000478250 HMGXB3Q12766 1538 aa23.67■■□□□ 1.38
NR4A1-205ENST00000478250 PCGF6Q9BYE7 350 aa23.66■■□□□ 1.38
NR4A1-205ENST00000478250 CCDC88BA6NC98 1476 aa23.62■■□□□ 1.37
NR4A1-205ENST00000478250 TRIM41Q8WV44 630 aa23.61■■□□□ 1.37
NR4A1-205ENST00000478250 LOC105371045A0A1W2PR82 267 aa23.44■■□□□ 1.34
NR4A1-205ENST00000478250 ABCC8Q09428 1581 aa23.32■■□□□ 1.32
NR4A1-205ENST00000478250 PPARGC1BQ86YN6 1023 aaKnown RBP23.27■■□□□ 1.32
NR4A1-205ENST00000478250 TRIM26Q12899 539 aaPredicted RBP23.22■■□□□ 1.31
NR4A1-205ENST00000478250 FAM9AQ8IZU1 332 aaPredicted RBP23.18■■□□□ 1.3
NR4A1-205ENST00000478250 CADPSQ9ULU8 1353 aa23.11■■□□□ 1.29
NR4A1-205ENST00000478250 WRNQ14191 1432 aaPredicted RBP eCLIP23.08■■□□□ 1.29
NR4A1-205ENST00000478250 MYT1Q01538 1121 aa23.08■■□□□ 1.28
NR4A1-205ENST00000478250 CFTRP13569 1480 aa23.06■■□□□ 1.28
NR4A1-205ENST00000478250 NESP48681 1621 aa23.04■■□□□ 1.28
NR4A1-205ENST00000478250 EEA1Q15075 1411 aa23.04■■□□□ 1.28
NR4A1-205ENST00000478250 LAMC3Q9Y6N6 1575 aa23.04■■□□□ 1.28
NR4A1-205ENST00000478250 ZEB1P37275 1124 aaPredicted RBP23.03■■□□□ 1.28
NR4A1-205ENST00000478250 SYNJ1O43426 1573 aa23.02■■□□□ 1.28
NR4A1-205ENST00000478250 SOGA1O94964 1423 aa22.96■■□□□ 1.27
NR4A1-205ENST00000478250 PDS5BQ9NTI5 1447 aa22.9■■□□□ 1.26
NR4A1-205ENST00000478250 PRDM2Q13029 1718 aa22.89■■□□□ 1.26
NR4A1-205ENST00000478250 TOP2BQ02880 1626 aa22.88■■□□□ 1.25
NR4A1-205ENST00000478250 BIVM-ERCC5R4GMW8 1640 aa22.87■■□□□ 1.25
NR4A1-205ENST00000478250 RUSC2Q8N2Y8 1516 aa22.85■■□□□ 1.25
NR4A1-205ENST00000478250 FANCD2Q9BXW9 1451 aa22.84■■□□□ 1.25
NR4A1-205ENST00000478250 EHMT2Q96KQ7 1210 aa22.81■■□□□ 1.24
NR4A1-205ENST00000478250 ERCC6Q03468 1493 aa22.8■■□□□ 1.24
NR4A1-205ENST00000478250 CSRNP3Q8WYN3 585 aa22.79■■□□□ 1.24
NR4A1-205ENST00000478250 KIF21AQ7Z4S6 1674 aa22.77■■□□□ 1.24
NR4A1-205ENST00000478250 KIF21BO75037 1637 aa22.76■■□□□ 1.23
NR4A1-205ENST00000478250 CEP164Q9UPV0 1460 aa22.76■■□□□ 1.23
NR4A1-205ENST00000478250 TNIKQ9UKE5 1360 aa22.75■■□□□ 1.23
NR4A1-205ENST00000478250 GOLGA3Q08378 1498 aa22.75■■□□□ 1.23
NR4A1-205ENST00000478250 CUX1P39880 1505 aa22.69■■□□□ 1.22
NR4A1-205ENST00000478250 CEP162Q5TB80 1403 aa22.68■■□□□ 1.22
NR4A1-205ENST00000478250 MRC2Q9UBG0 1479 aa22.62■■□□□ 1.21
NR4A1-205ENST00000478250 URB2Q14146 1524 aaKnown RBP22.57■■□□□ 1.2
NR4A1-205ENST00000478250 THOC2Q8NI27 1593 aaKnown RBP22.56■■□□□ 1.2
NR4A1-205ENST00000478250 DNMBPQ6XZF7 1577 aa22.53■■□□□ 1.2
NR4A1-205ENST00000478250 TOPBP1Q92547 1522 aa22.52■■□□□ 1.2
NR4A1-205ENST00000478250 WDR62O43379 1518 aa22.52■■□□□ 1.2
NR4A1-205ENST00000478250 UBTFP17480 764 aaKnown RBP22.51■■□□□ 1.19
NR4A1-205ENST00000478250 SCAF1Q9H7N4 1312 aaKnown RBP22.51■■□□□ 1.19
NR4A1-205ENST00000478250 ERICH3Q5RHP9 1530 aa22.51■■□□□ 1.19
NR4A1-205ENST00000478250 RAPGEF2Q9Y4G8 1499 aa22.49■■□□□ 1.19
NR4A1-205ENST00000478250 PRXQ9BXM0 1461 aa22.46■■□□□ 1.19
NR4A1-205ENST00000478250 KIF27Q86VH2 1401 aa22.44■■□□□ 1.18
NR4A1-205ENST00000478250 FGD5Q6ZNL6 1462 aa22.38■■□□□ 1.17
NR4A1-205ENST00000478250 CLIP1P30622 1438 aa22.38■■□□□ 1.17
NR4A1-205ENST00000478250 POLA1P09884 1462 aaPredicted RBP22.36■■□□□ 1.17
NR4A1-205ENST00000478250 CUX2O14529 1486 aa22.34■■□□□ 1.17
NR4A1-205ENST00000478250 VPS8Q8N3P4 1428 aa22.28■■□□□ 1.16
NR4A1-205ENST00000478250 RAD54L2Q9Y4B4 1467 aa22.27■■□□□ 1.16
NR4A1-205ENST00000478250 IFT140Q96RY7 1462 aa22.27■■□□□ 1.15
NR4A1-205ENST00000478250 TARBP1Q13395 1621 aaKnown RBP22.22■■□□□ 1.15
NR4A1-205ENST00000478250 CCER1Q8TC90 406 aaPredicted RBP22.2■■□□□ 1.14
NR4A1-205ENST00000478250 ACIN1Q9UKV3 1341 aaKnown RBP22.2■■□□□ 1.14
NR4A1-205ENST00000478250 ABCA10Q8WWZ4 1543 aa22.18■■□□□ 1.14
NR4A1-205ENST00000478250 IGF1RP08069 1367 aa22.17■■□□□ 1.14
NR4A1-205ENST00000478250 ARAP1Q96P48 1450 aa22.14■■□□□ 1.13
NR4A1-205ENST00000478250 WDR97A6NE52 1622 aa22.13■■□□□ 1.13
NR4A1-205ENST00000478250 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.13■■□□□ 1.13
NR4A1-205ENST00000478250 TDRD9Q8NDG6 1382 aaKnown RBP22.12■■□□□ 1.13
NR4A1-205ENST00000478250 ZNF608Q9ULD9 1512 aaPredicted RBP22.12■■□□□ 1.13
NR4A1-205ENST00000478250 CENPBP07199 599 aaPredicted RBP22.12■■□□□ 1.13
NR4A1-205ENST00000478250 AQRO60306 1485 aaKnown RBP eCLIP22.08■■□□□ 1.12
NR4A1-205ENST00000478250 CARMIL1Q5VZK9 1371 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 154.9 ms