RNA–Protein interactions for RNA: ENST00000473291.1

HHLA1-203, Transcript of HERV-H LTR-associating 1, humanhuman

TSL 1 (best)

Gene HHLA1, Length 2,268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA1-203ENST00000473291 NISCHQ9Y2I1 1504 aa15.87■□□□□ 0.13
HHLA1-203ENST00000473291 CCDC180Q9P1Z9 1646 aa13.67□□□□□ -0.22
HHLA1-203ENST00000473291 ZCCHC6Q5VYS8 1495 aaKnown RBP13.39□□□□□ -0.27
HHLA1-203ENST00000473291 PELP1Q8IZL8 1130 aaKnown RBP13.26□□□□□ -0.29
HHLA1-203ENST00000473291 MYT1Q01538 1121 aa13.19□□□□□ -0.3
HHLA1-203ENST00000473291 SHROOM4Q9ULL8 1493 aa13.17□□□□□ -0.3
HHLA1-203ENST00000473291 DCAF1Q9Y4B6 1507 aa13.11□□□□□ -0.31
HHLA1-203ENST00000473291 DCAF8L2P0C7V8 631 aa13.05□□□□□ -0.32
HHLA1-203ENST00000473291 MYO15BQ96JP2 1530 aa12.85□□□□□ -0.35
HHLA1-203ENST00000473291 SUPT5HO00267 1087 aaKnown RBP12.79□□□□□ -0.36
HHLA1-203ENST00000473291 ABCC9O60706 1549 aa12.75□□□□□ -0.37
HHLA1-203ENST00000473291 TTBK1Q5TCY1 1321 aaPredicted RBP12.75□□□□□ -0.37
HHLA1-203ENST00000473291 NACADO15069 1562 aa12.69□□□□□ -0.38
HHLA1-203ENST00000473291 SCRIBQ14160 1630 aa12.66□□□□□ -0.38
HHLA1-203ENST00000473291 RB1CC1Q8TDY2 1594 aa12.52□□□□□ -0.4
HHLA1-203ENST00000473291 HRCP23327 699 aa12.44□□□□□ -0.42
HHLA1-203ENST00000473291 RSF1Q96T23 1441 aaPredicted RBP12.43□□□□□ -0.42
HHLA1-203ENST00000473291 CHIC1Q5VXU3 224 aa12.37□□□□□ -0.43
HHLA1-203ENST00000473291 CECR2Q9BXF3 1484 aa12.33□□□□□ -0.43
HHLA1-203ENST00000473291 MROH2BQ7Z745 1585 aa12.29□□□□□ -0.44
HHLA1-203ENST00000473291 UNC13AQ9UPW8 1703 aa12.26□□□□□ -0.45
HHLA1-203ENST00000473291 BAZ1AQ9NRL2 1556 aaPredicted RBP12.23□□□□□ -0.45
HHLA1-203ENST00000473291 WIZO95785 1651 aa12.18□□□□□ -0.46
HHLA1-203ENST00000473291 BICRAQ9NZM4 1560 aa12.16□□□□□ -0.46
HHLA1-203ENST00000473291 SMARCA4P51532 1647 aa12.14□□□□□ -0.47
HHLA1-203ENST00000473291 PABPN1Q86U42 306 aaKnown RBP eCLIP12.1□□□□□ -0.47
HHLA1-203ENST00000473291 ERICH6Q7L0X2 663 aa12.08□□□□□ -0.48
HHLA1-203ENST00000473291 TOP2AP11388 1531 aaKnown RBP12.06□□□□□ -0.48
HHLA1-203ENST00000473291 PPARGC1BQ86YN6 1023 aaKnown RBP12□□□□□ -0.49
HHLA1-203ENST00000473291 TRIM41Q8WV44 630 aa11.99□□□□□ -0.49
HHLA1-203ENST00000473291 SLC24A1O60721 1099 aa11.99□□□□□ -0.49
HHLA1-203ENST00000473291 PRKCSHP14314 528 aaPredicted RBP11.98□□□□□ -0.49
HHLA1-203ENST00000473291 EIF4G1Q04637 1599 aaKnown RBP11.98□□□□□ -0.49
HHLA1-203ENST00000473291 PEG3Q9GZU2 1588 aa11.97□□□□□ -0.49
HHLA1-203ENST00000473291 SMARCA2P51531 1590 aa11.96□□□□□ -0.49
HHLA1-203ENST00000473291 CCDC88BA6NC98 1476 aa11.96□□□□□ -0.5
HHLA1-203ENST00000473291 LOC105371045A0A1W2PR82 267 aa11.93□□□□□ -0.5
HHLA1-203ENST00000473291 APLP2Q06481 763 aa11.91□□□□□ -0.5
HHLA1-203ENST00000473291 SCAF1Q9H7N4 1312 aaKnown RBP11.91□□□□□ -0.5
HHLA1-203ENST00000473291 ATAD2BQ9ULI0 1458 aa11.88□□□□□ -0.51
HHLA1-203ENST00000473291 BAZ1BQ9UIG0 1483 aaKnown RBP11.83□□□□□ -0.52
HHLA1-203ENST00000473291 PCGF6Q9BYE7 350 aa11.83□□□□□ -0.52
HHLA1-203ENST00000473291 FAM9AQ8IZU1 332 aaPredicted RBP11.8□□□□□ -0.52
HHLA1-203ENST00000473291 ABCC8Q09428 1581 aa11.8□□□□□ -0.52
HHLA1-203ENST00000473291 NCAPD3P42695 1498 aa11.73□□□□□ -0.53
HHLA1-203ENST00000473291 HMGXB3Q12766 1538 aa11.73□□□□□ -0.53
HHLA1-203ENST00000473291 ZEB1P37275 1124 aaPredicted RBP11.69□□□□□ -0.54
HHLA1-203ENST00000473291 WRNQ14191 1432 aaPredicted RBP eCLIP11.68□□□□□ -0.54
HHLA1-203ENST00000473291 BCL11AQ9H165 835 aa11.68□□□□□ -0.54
HHLA1-203ENST00000473291 EHMT2Q96KQ7 1210 aa11.64□□□□□ -0.55
HHLA1-203ENST00000473291 SOGA1O94964 1423 aa11.64□□□□□ -0.55
HHLA1-203ENST00000473291 EEA1Q15075 1411 aa11.64□□□□□ -0.55
HHLA1-203ENST00000473291 SYNJ1O43426 1573 aa11.63□□□□□ -0.55
HHLA1-203ENST00000473291 RUSC2Q8N2Y8 1516 aa11.58□□□□□ -0.56
HHLA1-203ENST00000473291 TRIM26Q12899 539 aaPredicted RBP11.57□□□□□ -0.56
HHLA1-203ENST00000473291 CSRNP3Q8WYN3 585 aa11.56□□□□□ -0.56
HHLA1-203ENST00000473291 CFTRP13569 1480 aa11.55□□□□□ -0.56
HHLA1-203ENST00000473291 DAXXQ9UER7 740 aaPredicted RBP11.55□□□□□ -0.56
HHLA1-203ENST00000473291 TOP2BQ02880 1626 aa11.54□□□□□ -0.56
HHLA1-203ENST00000473291 ACIN1Q9UKV3 1341 aaKnown RBP11.53□□□□□ -0.56
HHLA1-203ENST00000473291 CC2D2AQ9P2K1 1620 aa11.53□□□□□ -0.56
HHLA1-203ENST00000473291 TNIKQ9UKE5 1360 aa11.52□□□□□ -0.57
HHLA1-203ENST00000473291 BIVM-ERCC5R4GMW8 1640 aa11.51□□□□□ -0.57
HHLA1-203ENST00000473291 GOLGA3Q08378 1498 aa11.5□□□□□ -0.57
HHLA1-203ENST00000473291 CEP162Q5TB80 1403 aa11.49□□□□□ -0.57
HHLA1-203ENST00000473291 CENPBP07199 599 aaPredicted RBP11.48□□□□□ -0.57
HHLA1-203ENST00000473291 CEP164Q9UPV0 1460 aa11.48□□□□□ -0.57
HHLA1-203ENST00000473291 KIF21BO75037 1637 aa11.47□□□□□ -0.57
HHLA1-203ENST00000473291 CUX1P39880 1505 aa11.47□□□□□ -0.57
HHLA1-203ENST00000473291 CADPSQ9ULU8 1353 aa11.45□□□□□ -0.58
HHLA1-203ENST00000473291 UBTFP17480 764 aaKnown RBP11.44□□□□□ -0.58
HHLA1-203ENST00000473291 PRDM2Q13029 1718 aa11.44□□□□□ -0.58
HHLA1-203ENST00000473291 NEUROD1Q13562 356 aa11.42□□□□□ -0.58
HHLA1-203ENST00000473291 RAPGEF2Q9Y4G8 1499 aa11.39□□□□□ -0.59
HHLA1-203ENST00000473291 GTF3C3Q9Y5Q9 886 aa11.37□□□□□ -0.59
HHLA1-203ENST00000473291 PRXQ9BXM0 1461 aa11.36□□□□□ -0.59
HHLA1-203ENST00000473291 KIF27Q86VH2 1401 aa11.36□□□□□ -0.59
HHLA1-203ENST00000473291 ERICH3Q5RHP9 1530 aa11.35□□□□□ -0.59
HHLA1-203ENST00000473291 CLIP1P30622 1438 aa11.34□□□□□ -0.59
HHLA1-203ENST00000473291 FANCD2Q9BXW9 1451 aa11.33□□□□□ -0.6
HHLA1-203ENST00000473291 FGD5Q6ZNL6 1462 aa11.3□□□□□ -0.6
HHLA1-203ENST00000473291 NESP48681 1621 aa11.29□□□□□ -0.6
HHLA1-203ENST00000473291 CUX2O14529 1486 aa11.28□□□□□ -0.6
HHLA1-203ENST00000473291 VPS8Q8N3P4 1428 aa11.27□□□□□ -0.6
HHLA1-203ENST00000473291 LAMC3Q9Y6N6 1575 aa11.27□□□□□ -0.61
HHLA1-203ENST00000473291 DNMBPQ6XZF7 1577 aa11.26□□□□□ -0.61
HHLA1-203ENST00000473291 IGF1RP08069 1367 aa11.24□□□□□ -0.61
HHLA1-203ENST00000473291 TOPBP1Q92547 1522 aa11.24□□□□□ -0.61
HHLA1-203ENST00000473291 POLA1P09884 1462 aaPredicted RBP11.21□□□□□ -0.61
HHLA1-203ENST00000473291 DNAJC5BQ9UF47 199 aa11.21□□□□□ -0.62
HHLA1-203ENST00000473291 EIF5BO60841 1220 aaKnown RBP11.2□□□□□ -0.62
HHLA1-203ENST00000473291 RANGAP1P46060 587 aaPredicted RBP11.2□□□□□ -0.62
HHLA1-203ENST00000473291 ABCA10Q8WWZ4 1543 aa11.2□□□□□ -0.62
HHLA1-203ENST00000473291 ARAP1Q96P48 1450 aa11.2□□□□□ -0.62
HHLA1-203ENST00000473291 PDS5BQ9NTI5 1447 aa11.19□□□□□ -0.62
HHLA1-203ENST00000473291 URB2Q14146 1524 aaKnown RBP11.18□□□□□ -0.62
HHLA1-203ENST00000473291 CARMIL1Q5VZK9 1371 aa11.18□□□□□ -0.62
HHLA1-203ENST00000473291 RAD54L2Q9Y4B4 1467 aa11.18□□□□□ -0.62
HHLA1-203ENST00000473291 ANP32EQ9BTT0 268 aa11.15□□□□□ -0.62
HHLA1-203ENST00000473291 ARHGAP35Q9NRY4 1499 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms