RNA–Protein interactions for RNA: ENST00000473262.5

SLC12A8-208, Transcript of solute carrier family 12 member 8, humanhuman

TSL 5

Gene SLC12A8, Length 3,045 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC12A8-208ENST00000473262 NISCHQ9Y2I1 1504 aa23.95■■□□□ 1.42
SLC12A8-208ENST00000473262 CCDC180Q9P1Z9 1646 aa20.46■□□□□ 0.87
SLC12A8-208ENST00000473262 SHROOM4Q9ULL8 1493 aa20.31■□□□□ 0.84
SLC12A8-208ENST00000473262 ZCCHC6Q5VYS8 1495 aaKnown RBP20.23■□□□□ 0.83
SLC12A8-208ENST00000473262 SUPT5HO00267 1087 aaKnown RBP19.91■□□□□ 0.78
SLC12A8-208ENST00000473262 DCAF8L2P0C7V8 631 aa19.8■□□□□ 0.76
SLC12A8-208ENST00000473262 DCAF1Q9Y4B6 1507 aa19.72■□□□□ 0.75
SLC12A8-208ENST00000473262 MYO15BQ96JP2 1530 aa19.24■□□□□ 0.67
SLC12A8-208ENST00000473262 CHIC1Q5VXU3 224 aa19.13■□□□□ 0.65
SLC12A8-208ENST00000473262 SCRIBQ14160 1630 aa19.05■□□□□ 0.64
SLC12A8-208ENST00000473262 ABCC9O60706 1549 aa19.03■□□□□ 0.64
SLC12A8-208ENST00000473262 NACADO15069 1562 aa18.96■□□□□ 0.63
SLC12A8-208ENST00000473262 RSF1Q96T23 1441 aaPredicted RBP18.87■□□□□ 0.61
SLC12A8-208ENST00000473262 LOC105371045A0A1W2PR82 267 aa18.84■□□□□ 0.61
SLC12A8-208ENST00000473262 PCGF6Q9BYE7 350 aa18.79■□□□□ 0.6
SLC12A8-208ENST00000473262 EHMT2Q96KQ7 1210 aa18.65■□□□□ 0.58
SLC12A8-208ENST00000473262 RB1CC1Q8TDY2 1594 aa18.65■□□□□ 0.58
SLC12A8-208ENST00000473262 CECR2Q9BXF3 1484 aa18.64■□□□□ 0.58
SLC12A8-208ENST00000473262 PPARGC1BQ86YN6 1023 aaKnown RBP18.6■□□□□ 0.57
SLC12A8-208ENST00000473262 MROH2BQ7Z745 1585 aa18.57■□□□□ 0.56
SLC12A8-208ENST00000473262 HRCP23327 699 aa18.54■□□□□ 0.56
SLC12A8-208ENST00000473262 FAM9AQ8IZU1 332 aaPredicted RBP18.52■□□□□ 0.55
SLC12A8-208ENST00000473262 WIZO95785 1651 aa18.44■□□□□ 0.54
SLC12A8-208ENST00000473262 BAZ1AQ9NRL2 1556 aaPredicted RBP18.4■□□□□ 0.54
SLC12A8-208ENST00000473262 TRIM41Q8WV44 630 aa18.4■□□□□ 0.54
SLC12A8-208ENST00000473262 UNC13AQ9UPW8 1703 aa18.33■□□□□ 0.52
SLC12A8-208ENST00000473262 SMARCA4P51532 1647 aa18.25■□□□□ 0.51
SLC12A8-208ENST00000473262 TOP2AP11388 1531 aaKnown RBP18.2■□□□□ 0.5
SLC12A8-208ENST00000473262 EIF4G1Q04637 1599 aaKnown RBP18.18■□□□□ 0.5
SLC12A8-208ENST00000473262 BICRAQ9NZM4 1560 aa18.16■□□□□ 0.5
SLC12A8-208ENST00000473262 PABPN1Q86U42 306 aaKnown RBP eCLIP18.11■□□□□ 0.49
SLC12A8-208ENST00000473262 CCDC88BA6NC98 1476 aa18.1■□□□□ 0.49
SLC12A8-208ENST00000473262 TRIM26Q12899 539 aaPredicted RBP18.09■□□□□ 0.49
SLC12A8-208ENST00000473262 SMARCA2P51531 1590 aa18.08■□□□□ 0.48
SLC12A8-208ENST00000473262 TTBK1Q5TCY1 1321 aaPredicted RBP17.99■□□□□ 0.47
SLC12A8-208ENST00000473262 PEG3Q9GZU2 1588 aa17.98■□□□□ 0.47
SLC12A8-208ENST00000473262 ABCC8Q09428 1581 aa17.94■□□□□ 0.46
SLC12A8-208ENST00000473262 ATAD2BQ9ULI0 1458 aa17.84■□□□□ 0.45
SLC12A8-208ENST00000473262 PELP1Q8IZL8 1130 aaKnown RBP17.82■□□□□ 0.44
SLC12A8-208ENST00000473262 SOGA1O94964 1423 aa17.77■□□□□ 0.44
SLC12A8-208ENST00000473262 BAZ1BQ9UIG0 1483 aaKnown RBP17.75■□□□□ 0.43
SLC12A8-208ENST00000473262 WRNQ14191 1432 aaPredicted RBP eCLIP17.72■□□□□ 0.43
SLC12A8-208ENST00000473262 EEA1Q15075 1411 aa17.72■□□□□ 0.43
SLC12A8-208ENST00000473262 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.71■□□□□ 0.43
SLC12A8-208ENST00000473262 RUSC2Q8N2Y8 1516 aa17.68■□□□□ 0.42
SLC12A8-208ENST00000473262 CSRNP3Q8WYN3 585 aa17.68■□□□□ 0.42
SLC12A8-208ENST00000473262 TNIKQ9UKE5 1360 aa17.64■□□□□ 0.41
SLC12A8-208ENST00000473262 SYNJ1O43426 1573 aa17.62■□□□□ 0.41
SLC12A8-208ENST00000473262 CEP162Q5TB80 1403 aa17.61■□□□□ 0.41
SLC12A8-208ENST00000473262 ZEB1P37275 1124 aaPredicted RBP17.59■□□□□ 0.41
SLC12A8-208ENST00000473262 NCAPD3P42695 1498 aa17.56■□□□□ 0.4
SLC12A8-208ENST00000473262 RANGAP1P46060 587 aaPredicted RBP17.55■□□□□ 0.4
SLC12A8-208ENST00000473262 GOLGA3Q08378 1498 aa17.54■□□□□ 0.4
SLC12A8-208ENST00000473262 HMGXB3Q12766 1538 aa17.53■□□□□ 0.4
SLC12A8-208ENST00000473262 UBTFP17480 764 aaKnown RBP17.53■□□□□ 0.4
SLC12A8-208ENST00000473262 CCER1Q8TC90 406 aaPredicted RBP17.52■□□□□ 0.39
SLC12A8-208ENST00000473262 CEP164Q9UPV0 1460 aa17.47■□□□□ 0.39
SLC12A8-208ENST00000473262 KIF21BO75037 1637 aa17.46■□□□□ 0.39
SLC12A8-208ENST00000473262 TOP2BQ02880 1626 aa17.45■□□□□ 0.38
SLC12A8-208ENST00000473262 SCAF1Q9H7N4 1312 aaKnown RBP17.4■□□□□ 0.38
SLC12A8-208ENST00000473262 BIVM-ERCC5R4GMW8 1640 aa17.39■□□□□ 0.37
SLC12A8-208ENST00000473262 CFTRP13569 1480 aa17.36■□□□□ 0.37
SLC12A8-208ENST00000473262 RAPGEF2Q9Y4G8 1499 aa17.35■□□□□ 0.37
SLC12A8-208ENST00000473262 CLIP1P30622 1438 aa17.32■□□□□ 0.36
SLC12A8-208ENST00000473262 CUX1P39880 1505 aa17.31■□□□□ 0.36
SLC12A8-208ENST00000473262 HNRNPUL2Q1KMD3 747 aaKnown RBP17.28■□□□□ 0.36
SLC12A8-208ENST00000473262 PRXQ9BXM0 1461 aa17.26■□□□□ 0.35
SLC12A8-208ENST00000473262 VPS8Q8N3P4 1428 aa17.25■□□□□ 0.35
SLC12A8-208ENST00000473262 ERICH3Q5RHP9 1530 aa17.23■□□□□ 0.35
SLC12A8-208ENST00000473262 KIF27Q86VH2 1401 aa17.19■□□□□ 0.34
SLC12A8-208ENST00000473262 CADPSQ9ULU8 1353 aa17.18■□□□□ 0.34
SLC12A8-208ENST00000473262 MYT1Q01538 1121 aa17.17■□□□□ 0.34
SLC12A8-208ENST00000473262 PRDM2Q13029 1718 aa17.17■□□□□ 0.34
SLC12A8-208ENST00000473262 CC2D2AQ9P2K1 1620 aa17.14■□□□□ 0.33
SLC12A8-208ENST00000473262 DIEXFQ68CQ4 756 aaKnown RBP17.13■□□□□ 0.33
SLC12A8-208ENST00000473262 NEUROD1Q13562 356 aa17.11■□□□□ 0.33
SLC12A8-208ENST00000473262 APLP2Q06481 763 aa17.1■□□□□ 0.33
SLC12A8-208ENST00000473262 ARAP1Q96P48 1450 aa17.08■□□□□ 0.32
SLC12A8-208ENST00000473262 YTHDC1Q96MU7 727 aaKnown RBP17.06■□□□□ 0.32
SLC12A8-208ENST00000473262 IGF1RP08069 1367 aa17.04■□□□□ 0.32
SLC12A8-208ENST00000473262 CUX2O14529 1486 aa17.03■□□□□ 0.32
SLC12A8-208ENST00000473262 FGD5Q6ZNL6 1462 aa17.01■□□□□ 0.31
SLC12A8-208ENST00000473262 FANCD2Q9BXW9 1451 aa16.99■□□□□ 0.31
SLC12A8-208ENST00000473262 ARHGAP35Q9NRY4 1499 aa16.97■□□□□ 0.31
SLC12A8-208ENST00000473262 ACIN1Q9UKV3 1341 aaKnown RBP16.96■□□□□ 0.31
SLC12A8-208ENST00000473262 KANK4Q5T7N3 995 aaPredicted RBP16.94■□□□□ 0.3
SLC12A8-208ENST00000473262 CARMIL1Q5VZK9 1371 aa16.94■□□□□ 0.3
SLC12A8-208ENST00000473262 GTF3C3Q9Y5Q9 886 aa16.93■□□□□ 0.3
SLC12A8-208ENST00000473262 ITGAEP38570 1179 aa16.91■□□□□ 0.3
SLC12A8-208ENST00000473262 ZNF316A6NFI3 1004 aaPredicted RBP16.9■□□□□ 0.3
SLC12A8-208ENST00000473262 DNMBPQ6XZF7 1577 aa16.89■□□□□ 0.29
SLC12A8-208ENST00000473262 NESP48681 1621 aa16.89■□□□□ 0.29
SLC12A8-208ENST00000473262 TOPBP1Q92547 1522 aa16.87■□□□□ 0.29
SLC12A8-208ENST00000473262 MIER1Q8N108 512 aa16.86■□□□□ 0.29
SLC12A8-208ENST00000473262 ABCA10Q8WWZ4 1543 aa16.85■□□□□ 0.29
SLC12A8-208ENST00000473262 POLA1P09884 1462 aaPredicted RBP16.85■□□□□ 0.29
SLC12A8-208ENST00000473262 RAD54L2Q9Y4B4 1467 aa16.85■□□□□ 0.29
SLC12A8-208ENST00000473262 RRBP1Q9P2E9 1410 aaKnown RBP16.84■□□□□ 0.29
SLC12A8-208ENST00000473262 LAMC3Q9Y6N6 1575 aa16.81■□□□□ 0.28
SLC12A8-208ENST00000473262 MAP3K1Q13233 1512 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms