RNA–Protein interactions for RNA: ENST00000471603.6

PKD1-207, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 2,505 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-207ENST00000471603 NISCHQ9Y2I1 1504 aa29.68■■■□□ 2.34
PKD1-207ENST00000471603 CCDC180Q9P1Z9 1646 aa25.86■■□□□ 1.73
PKD1-207ENST00000471603 ABCC9O60706 1549 aa24.99■■□□□ 1.59
PKD1-207ENST00000471603 DCAF8L2P0C7V8 631 aa24.95■■□□□ 1.59
PKD1-207ENST00000471603 ZCCHC6Q5VYS8 1495 aaKnown RBP24.88■■□□□ 1.57
PKD1-207ENST00000471603 SHROOM4Q9ULL8 1493 aa24.45■■□□□ 1.5
PKD1-207ENST00000471603 DCAF1Q9Y4B6 1507 aa24.34■■□□□ 1.49
PKD1-207ENST00000471603 NACADO15069 1562 aa24.15■■□□□ 1.46
PKD1-207ENST00000471603 MYO15BQ96JP2 1530 aa24.08■■□□□ 1.45
PKD1-207ENST00000471603 RB1CC1Q8TDY2 1594 aa24.06■■□□□ 1.44
PKD1-207ENST00000471603 SCRIBQ14160 1630 aa24.04■■□□□ 1.44
PKD1-207ENST00000471603 PELP1Q8IZL8 1130 aaKnown RBP23.95■■□□□ 1.43
PKD1-207ENST00000471603 UNC13AQ9UPW8 1703 aa23.72■■□□□ 1.39
PKD1-207ENST00000471603 HRCP23327 699 aa23.65■■□□□ 1.38
PKD1-207ENST00000471603 PABPN1Q86U42 306 aaKnown RBP eCLIP23.6■■□□□ 1.37
PKD1-207ENST00000471603 BICRAQ9NZM4 1560 aa23.43■■□□□ 1.34
PKD1-207ENST00000471603 SUPT5HO00267 1087 aaKnown RBP23.35■■□□□ 1.33
PKD1-207ENST00000471603 MYT1Q01538 1121 aa23.31■■□□□ 1.32
PKD1-207ENST00000471603 CECR2Q9BXF3 1484 aa23.25■■□□□ 1.31
PKD1-207ENST00000471603 MROH2BQ7Z745 1585 aa23.03■■□□□ 1.28
PKD1-207ENST00000471603 RSF1Q96T23 1441 aaPredicted RBP23■■□□□ 1.27
PKD1-207ENST00000471603 BAZ1AQ9NRL2 1556 aaPredicted RBP22.91■■□□□ 1.26
PKD1-207ENST00000471603 SMARCA4P51532 1647 aa22.89■■□□□ 1.26
PKD1-207ENST00000471603 WIZO95785 1651 aa22.88■■□□□ 1.25
PKD1-207ENST00000471603 PPARGC1BQ86YN6 1023 aaKnown RBP22.81■■□□□ 1.24
PKD1-207ENST00000471603 EIF4G1Q04637 1599 aaKnown RBP22.75■■□□□ 1.23
PKD1-207ENST00000471603 PCGF6Q9BYE7 350 aa22.64■■□□□ 1.21
PKD1-207ENST00000471603 SCAF1Q9H7N4 1312 aaKnown RBP22.58■■□□□ 1.21
PKD1-207ENST00000471603 ATAD2BQ9ULI0 1458 aa22.57■■□□□ 1.2
PKD1-207ENST00000471603 CC2D2AQ9P2K1 1620 aa22.51■■□□□ 1.19
PKD1-207ENST00000471603 PEG3Q9GZU2 1588 aa22.49■■□□□ 1.19
PKD1-207ENST00000471603 TOP2AP11388 1531 aaKnown RBP22.47■■□□□ 1.19
PKD1-207ENST00000471603 SMARCA2P51531 1590 aa22.46■■□□□ 1.19
PKD1-207ENST00000471603 BAZ1BQ9UIG0 1483 aaKnown RBP22.46■■□□□ 1.19
PKD1-207ENST00000471603 NCAPD3P42695 1498 aa22.33■■□□□ 1.16
PKD1-207ENST00000471603 CCDC88BA6NC98 1476 aa22.32■■□□□ 1.16
PKD1-207ENST00000471603 DNAJC5BQ9UF47 199 aa22.32■■□□□ 1.16
PKD1-207ENST00000471603 CHIC1Q5VXU3 224 aa22.26■■□□□ 1.15
PKD1-207ENST00000471603 HMGXB3Q12766 1538 aa22.26■■□□□ 1.15
PKD1-207ENST00000471603 ZEB1P37275 1124 aaPredicted RBP22.16■■□□□ 1.14
PKD1-207ENST00000471603 TTBK1Q5TCY1 1321 aaPredicted RBP22.13■■□□□ 1.13
PKD1-207ENST00000471603 TRIM26Q12899 539 aaPredicted RBP21.99■■□□□ 1.11
PKD1-207ENST00000471603 ACIN1Q9UKV3 1341 aaKnown RBP21.95■■□□□ 1.1
PKD1-207ENST00000471603 ABCC8Q09428 1581 aa21.93■■□□□ 1.1
PKD1-207ENST00000471603 NESP48681 1621 aa21.89■■□□□ 1.1
PKD1-207ENST00000471603 TRIM41Q8WV44 630 aa21.82■■□□□ 1.08
PKD1-207ENST00000471603 CFTRP13569 1480 aa21.82■■□□□ 1.08
PKD1-207ENST00000471603 CADPSQ9ULU8 1353 aa21.81■■□□□ 1.08
PKD1-207ENST00000471603 NEUROD1Q13562 356 aa21.74■■□□□ 1.07
PKD1-207ENST00000471603 GTF3C3Q9Y5Q9 886 aa21.67■■□□□ 1.06
PKD1-207ENST00000471603 WRNQ14191 1432 aaPredicted RBP eCLIP21.65■■□□□ 1.06
PKD1-207ENST00000471603 PRDM2Q13029 1718 aa21.65■■□□□ 1.06
PKD1-207ENST00000471603 SYNJ1O43426 1573 aa21.64■■□□□ 1.05
PKD1-207ENST00000471603 FAM9AQ8IZU1 332 aaPredicted RBP21.64■■□□□ 1.05
PKD1-207ENST00000471603 CENPBP07199 599 aaPredicted RBP21.62■■□□□ 1.05
PKD1-207ENST00000471603 FANCD2Q9BXW9 1451 aa21.62■■□□□ 1.05
PKD1-207ENST00000471603 LAMC3Q9Y6N6 1575 aa21.61■■□□□ 1.05
PKD1-207ENST00000471603 LOC105371045A0A1W2PR82 267 aa21.59■■□□□ 1.05
PKD1-207ENST00000471603 KIF21AQ7Z4S6 1674 aa21.55■■□□□ 1.04
PKD1-207ENST00000471603 EHMT2Q96KQ7 1210 aa21.53■■□□□ 1.04
PKD1-207ENST00000471603 CUX1P39880 1505 aa21.53■■□□□ 1.04
PKD1-207ENST00000471603 CEP164Q9UPV0 1460 aa21.48■■□□□ 1.03
PKD1-207ENST00000471603 PDS5BQ9NTI5 1447 aa21.47■■□□□ 1.03
PKD1-207ENST00000471603 TOP2BQ02880 1626 aa21.45■■□□□ 1.02
PKD1-207ENST00000471603 SOGA1O94964 1423 aa21.43■■□□□ 1.02
PKD1-207ENST00000471603 RUSC2Q8N2Y8 1516 aa21.41■■□□□ 1.02
PKD1-207ENST00000471603 BIVM-ERCC5R4GMW8 1640 aa21.4■■□□□ 1.02
PKD1-207ENST00000471603 URB2Q14146 1524 aaKnown RBP21.39■■□□□ 1.01
PKD1-207ENST00000471603 ERCC6Q03468 1493 aa21.38■■□□□ 1.01
PKD1-207ENST00000471603 BCL11AQ9H165 835 aa21.35■■□□□ 1.01
PKD1-207ENST00000471603 TOPBP1Q92547 1522 aa21.35■■□□□ 1.01
PKD1-207ENST00000471603 FGD5Q6ZNL6 1462 aa21.34■■□□□ 1.01
PKD1-207ENST00000471603 DNMBPQ6XZF7 1577 aa21.31■■□□□ 1
PKD1-207ENST00000471603 RAD54L2Q9Y4B4 1467 aa21.27■■□□□ 1
PKD1-207ENST00000471603 POLA1P09884 1462 aaPredicted RBP21.26■□□□□ 0.99
PKD1-207ENST00000471603 MRC2Q9UBG0 1479 aa21.24■□□□□ 0.99
PKD1-207ENST00000471603 DIEXFQ68CQ4 756 aaKnown RBP21.18■□□□□ 0.98
PKD1-207ENST00000471603 CUX2O14529 1486 aa21.17■□□□□ 0.98
PKD1-207ENST00000471603 THOC2Q8NI27 1593 aaKnown RBP21.16■□□□□ 0.98
PKD1-207ENST00000471603 CSRNP3Q8WYN3 585 aa21.14■□□□□ 0.97
PKD1-207ENST00000471603 WDR62O43379 1518 aa21.12■□□□□ 0.97
PKD1-207ENST00000471603 TDRD9Q8NDG6 1382 aaKnown RBP21.1■□□□□ 0.97
PKD1-207ENST00000471603 KIF27Q86VH2 1401 aa21.08■□□□□ 0.96
PKD1-207ENST00000471603 ANP32EQ9BTT0 268 aa21.06■□□□□ 0.96
PKD1-207ENST00000471603 EEA1Q15075 1411 aa21.04■□□□□ 0.96
PKD1-207ENST00000471603 ABCA10Q8WWZ4 1543 aa21.03■□□□□ 0.96
PKD1-207ENST00000471603 TARBP1Q13395 1621 aaKnown RBP21.03■□□□□ 0.96
PKD1-207ENST00000471603 WDR97A6NE52 1622 aa21.01■□□□□ 0.95
PKD1-207ENST00000471603 ZNF608Q9ULD9 1512 aaPredicted RBP21.01■□□□□ 0.95
PKD1-207ENST00000471603 AQRO60306 1485 aaKnown RBP eCLIP20.99■□□□□ 0.951e-6■■■■■ 50
PKD1-207ENST00000471603 UBTFP17480 764 aaKnown RBP20.98■□□□□ 0.95
PKD1-207ENST00000471603 RAPGEF2Q9Y4G8 1499 aa20.97■□□□□ 0.95
PKD1-207ENST00000471603 RANGAP1P46060 587 aaPredicted RBP20.96■□□□□ 0.95
PKD1-207ENST00000471603 IGF1RP08069 1367 aa20.95■□□□□ 0.94
PKD1-207ENST00000471603 PRKCSHP14314 528 aaPredicted RBP20.95■□□□□ 0.94
PKD1-207ENST00000471603 GAPVD1Q14C86 1478 aa20.92■□□□□ 0.94
PKD1-207ENST00000471603 ABCA5Q8WWZ7 1642 aa20.92■□□□□ 0.94
PKD1-207ENST00000471603 IFT140Q96RY7 1462 aa20.9■□□□□ 0.94
PKD1-207ENST00000471603 GOLGA3Q08378 1498 aa20.88■□□□□ 0.93
PKD1-207ENST00000471603 KIF21BO75037 1637 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms