RNA–Protein interactions for RNA: ENST00000471471.1

GTF2B-205, Transcript of general transcription factor IIB, humanhuman

TSL 3

Gene GTF2B, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2B-205ENST00000471471 AEBP2Q6ZN18 517 aaPredicted RBP20.05■□□□□ 0.8
GTF2B-205ENST00000471471 CHIC1Q5VXU3 224 aa18.85■□□□□ 0.61
GTF2B-205ENST00000471471 SENP3Q9H4L4 574 aaPredicted RBP17.2■□□□□ 0.34
GTF2B-205ENST00000471471 NISCHQ9Y2I1 1504 aa17.06■□□□□ 0.32
GTF2B-205ENST00000471471 PHF23Q9BUL5 403 aaPredicted RBP16.89■□□□□ 0.29
GTF2B-205ENST00000471471 ABCC9O60706 1549 aa16.15■□□□□ 0.18
GTF2B-205ENST00000471471 FOXD1Q16676 465 aa16.01■□□□□ 0.15
GTF2B-205ENST00000471471 DNAJC5BQ9UF47 199 aa15.77■□□□□ 0.12
GTF2B-205ENST00000471471 CCDC180Q9P1Z9 1646 aa15.54■□□□□ 0.08
GTF2B-205ENST00000471471 MSH5O43196 834 aa15.14■□□□□ 0.01
GTF2B-205ENST00000471471 POTEDQ86YR6 584 aa15.14■□□□□ 0.01
GTF2B-205ENST00000471471 RB1CC1Q8TDY2 1594 aa15.07■□□□□ 0
GTF2B-205ENST00000471471 PABPN1Q86U42 306 aaKnown RBP eCLIP14.96□□□□□ -0.01
GTF2B-205ENST00000471471 PLPPR3Q6T4P5 718 aa14.95□□□□□ -0.02
GTF2B-205ENST00000471471 PIAS4Q8N2W9 510 aaPredicted RBP14.88□□□□□ -0.03
GTF2B-205ENST00000471471 DNAJC5Q9H3Z4 198 aa14.88□□□□□ -0.03
GTF2B-205ENST00000471471 NACADO15069 1562 aa14.84□□□□□ -0.03
GTF2B-205ENST00000471471 UNC13AQ9UPW8 1703 aa14.75□□□□□ -0.05
GTF2B-205ENST00000471471 PPP6R1Q9UPN7 881 aa14.75□□□□□ -0.05
GTF2B-205ENST00000471471 BICRAQ9NZM4 1560 aa14.73□□□□□ -0.05
GTF2B-205ENST00000471471 ADRA2BP18089 450 aa14.67□□□□□ -0.06
GTF2B-205ENST00000471471 CECR2Q9BXF3 1484 aa14.61□□□□□ -0.07
GTF2B-205ENST00000471471 DCAF8L2P0C7V8 631 aa14.59□□□□□ -0.07
GTF2B-205ENST00000471471 CC2D2AQ9P2K1 1620 aa14.55□□□□□ -0.08
GTF2B-205ENST00000471471 MYO15BQ96JP2 1530 aa14.46□□□□□ -0.09
GTF2B-205ENST00000471471 SHROOM4Q9ULL8 1493 aa14.42□□□□□ -0.1
GTF2B-205ENST00000471471 EIF4G1Q04637 1599 aaKnown RBP14.39□□□□□ -0.11
GTF2B-205ENST00000471471 CUX2O14529 1486 aa14.16□□□□□ -0.14
GTF2B-205ENST00000471471 SCRIBQ14160 1630 aa14.13□□□□□ -0.15
GTF2B-205ENST00000471471 DCAF1Q9Y4B6 1507 aa14.05□□□□□ -0.16
GTF2B-205ENST00000471471 ZCCHC6Q5VYS8 1495 aaKnown RBP14.02□□□□□ -0.16
GTF2B-205ENST00000471471 ERCC6Q03468 1493 aa13.94□□□□□ -0.18
GTF2B-205ENST00000471471 TRIM41Q8WV44 630 aa13.91□□□□□ -0.18
GTF2B-205ENST00000471471 NCAPD3P42695 1498 aa13.74□□□□□ -0.21
GTF2B-205ENST00000471471 NESP48681 1621 aa13.73□□□□□ -0.21
GTF2B-205ENST00000471471 THOC2Q8NI27 1593 aaKnown RBP13.7□□□□□ -0.22
GTF2B-205ENST00000471471 ATAD2BQ9ULI0 1458 aa13.61□□□□□ -0.23
GTF2B-205ENST00000471471 DMRT2Q9Y5R5 561 aa13.6□□□□□ -0.23
GTF2B-205ENST00000471471 HMGXB3Q12766 1538 aa13.56□□□□□ -0.24
GTF2B-205ENST00000471471 SMARCA2P51531 1590 aa13.54□□□□□ -0.24
GTF2B-205ENST00000471471 MAPK8IP2Q13387 824 aaPredicted RBP13.53□□□□□ -0.24
GTF2B-205ENST00000471471 SCAF1Q9H7N4 1312 aaKnown RBP13.51□□□□□ -0.25
GTF2B-205ENST00000471471 KIF21AQ7Z4S6 1674 aa13.49□□□□□ -0.25
GTF2B-205ENST00000471471 LAMC3Q9Y6N6 1575 aa13.49□□□□□ -0.25
GTF2B-205ENST00000471471 PDS5BQ9NTI5 1447 aa13.43□□□□□ -0.26
GTF2B-205ENST00000471471 SMARCA4P51532 1647 aa13.42□□□□□ -0.26
GTF2B-205ENST00000471471 BAZ1AQ9NRL2 1556 aaPredicted RBP13.42□□□□□ -0.26
GTF2B-205ENST00000471471 BAZ1BQ9UIG0 1483 aaKnown RBP13.41□□□□□ -0.26
GTF2B-205ENST00000471471 OSCARQ8IYS5 282 aa13.4□□□□□ -0.26
GTF2B-205ENST00000471471 WDR62O43379 1518 aa13.37□□□□□ -0.27
GTF2B-205ENST00000471471 MRC2Q9UBG0 1479 aa13.36□□□□□ -0.27
GTF2B-205ENST00000471471 PEG3Q9GZU2 1588 aa13.32□□□□□ -0.28
GTF2B-205ENST00000471471 RIMBP3CA6NJZ7 1639 aa13.31□□□□□ -0.28
GTF2B-205ENST00000471471 RIMBP3BA6NNM3 1639 aa13.31□□□□□ -0.28
GTF2B-205ENST00000471471 RIMBP3Q9UFD9 1639 aa13.31□□□□□ -0.28
GTF2B-205ENST00000471471 CADPSQ9ULU8 1353 aa13.29□□□□□ -0.28
GTF2B-205ENST00000471471 ARHGEF11O15085 1522 aa13.21□□□□□ -0.29
GTF2B-205ENST00000471471 CEP164Q9UPV0 1460 aa13.17□□□□□ -0.3
GTF2B-205ENST00000471471 MROH2BQ7Z745 1585 aa13.15□□□□□ -0.3
GTF2B-205ENST00000471471 TRHP20396 242 aaPredicted RBP13.14□□□□□ -0.31
GTF2B-205ENST00000471471 CYB5RLQ6IPT4 315 aa13.13□□□□□ -0.31
GTF2B-205ENST00000471471 FANCD2Q9BXW9 1451 aa13.12□□□□□ -0.31
GTF2B-205ENST00000471471 URB2Q14146 1524 aaKnown RBP13.08□□□□□ -0.31
GTF2B-205ENST00000471471 ARAP1Q96P48 1450 aa13.06□□□□□ -0.32
GTF2B-205ENST00000471471 CACNB1Q02641 598 aaPredicted RBP13.06□□□□□ -0.32
GTF2B-205ENST00000471471 PPP4R3CPQ6ZMV5 832 aa13.04□□□□□ -0.32
GTF2B-205ENST00000471471 HOXD11P31277 338 aaPredicted RBP13.03□□□□□ -0.32
GTF2B-205ENST00000471471 ZNF608Q9ULD9 1512 aaPredicted RBP13.03□□□□□ -0.32
GTF2B-205ENST00000471471 CFTRP13569 1480 aa13.02□□□□□ -0.33
GTF2B-205ENST00000471471 WIZO95785 1651 aa12.94□□□□□ -0.34
GTF2B-205ENST00000471471 IFT140Q96RY7 1462 aa12.94□□□□□ -0.34
GTF2B-205ENST00000471471 RSF1Q96T23 1441 aaPredicted RBP12.92□□□□□ -0.34
GTF2B-205ENST00000471471 DCAF8L1A6NGE4 600 aa12.91□□□□□ -0.34
GTF2B-205ENST00000471471 CNKSR2Q8WXI2 1034 aa12.89□□□□□ -0.35
GTF2B-205ENST00000471471 CHD1O14646 1710 aa12.88□□□□□ -0.35
GTF2B-205ENST00000471471 RNF39Q9H2S5 420 aa12.88□□□□□ -0.35
GTF2B-205ENST00000471471 EIF4G3O43432 1585 aaKnown RBP12.88□□□□□ -0.35
GTF2B-205ENST00000471471 RNF216Q9NWF9 866 aaPredicted RBP12.85□□□□□ -0.35
GTF2B-205ENST00000471471 AQRO60306 1485 aaKnown RBP eCLIP12.82□□□□□ -0.36
GTF2B-205ENST00000471471 TOPBP1Q92547 1522 aa12.82□□□□□ -0.36
GTF2B-205ENST00000471471 ILDR1Q86SU0 546 aaPredicted RBP12.8□□□□□ -0.36
GTF2B-205ENST00000471471 FBLN2P98095 1184 aa12.79□□□□□ -0.36
GTF2B-205ENST00000471471 CLASP1Q7Z460 1538 aa12.78□□□□□ -0.36
GTF2B-205ENST00000471471 TARBP1Q13395 1621 aaKnown RBP12.76□□□□□ -0.37
GTF2B-205ENST00000471471 PRDM2Q13029 1718 aa12.76□□□□□ -0.37
GTF2B-205ENST00000471471 TOP2AP11388 1531 aaKnown RBP12.72□□□□□ -0.37
GTF2B-205ENST00000471471 ABCC8Q09428 1581 aa12.7□□□□□ -0.38
GTF2B-205ENST00000471471 C1QBPQ07021 282 aaKnown RBP12.7□□□□□ -0.38
GTF2B-205ENST00000471471 DNMBPQ6XZF7 1577 aa12.69□□□□□ -0.38
GTF2B-205ENST00000471471 POLA1P09884 1462 aaPredicted RBP12.65□□□□□ -0.38
GTF2B-205ENST00000471471 GAPVD1Q14C86 1478 aa12.65□□□□□ -0.38
GTF2B-205ENST00000471471 SNAPC4Q5SXM2 1469 aa12.65□□□□□ -0.38
GTF2B-205ENST00000471471 SYNJ1O43426 1573 aa12.64□□□□□ -0.39
GTF2B-205ENST00000471471 TDRD9Q8NDG6 1382 aaKnown RBP12.64□□□□□ -0.39
GTF2B-205ENST00000471471 RAD54L2Q9Y4B4 1467 aa12.62□□□□□ -0.39
GTF2B-205ENST00000471471 CCDC88BA6NC98 1476 aa12.61□□□□□ -0.39
GTF2B-205ENST00000471471 CHMP7Q8WUX9 453 aaPredicted RBP12.61□□□□□ -0.39
GTF2B-205ENST00000471471 KDM4FA0A1W2PPD8 638 aa12.59□□□□□ -0.39
GTF2B-205ENST00000471471 MAGI1Q96QZ7 1491 aaPredicted RBP12.58□□□□□ -0.4
GTF2B-205ENST00000471471 SOGA1O94964 1423 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms