RNA–Protein interactions for RNA: ENST00000470570.1

MTR-204, Transcript of 5-methyltetrahydrofolate-homocysteine methyltransferase, humanhuman

TSL 2

Gene MTR, Length 4,175 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTR-204ENST00000470570 NISCHQ9Y2I1 1504 aa19.9■□□□□ 0.78
MTR-204ENST00000470570 CCDC180Q9P1Z9 1646 aa17.12■□□□□ 0.33
MTR-204ENST00000470570 ZCCHC6Q5VYS8 1495 aaKnown RBP16.88■□□□□ 0.29
MTR-204ENST00000470570 DCAF8L2P0C7V8 631 aa16.57■□□□□ 0.24
MTR-204ENST00000470570 SHROOM4Q9ULL8 1493 aa16.54■□□□□ 0.24
MTR-204ENST00000470570 DCAF1Q9Y4B6 1507 aa16.48■□□□□ 0.23
MTR-204ENST00000470570 SUPT5HO00267 1087 aaKnown RBP16.14■□□□□ 0.17
MTR-204ENST00000470570 MYO15BQ96JP2 1530 aa16.03■□□□□ 0.16
MTR-204ENST00000470570 ABCC9O60706 1549 aa15.96■□□□□ 0.15
MTR-204ENST00000470570 CHIC1Q5VXU3 224 aa15.9■□□□□ 0.14
MTR-204ENST00000470570 SCRIBQ14160 1630 aa15.78■□□□□ 0.12
MTR-204ENST00000470570 NACADO15069 1562 aa15.69■□□□□ 0.1
MTR-204ENST00000470570 RSF1Q96T23 1441 aaPredicted RBP15.67■□□□□ 0.1
MTR-204ENST00000470570 RB1CC1Q8TDY2 1594 aa15.58■□□□□ 0.08
MTR-204ENST00000470570 CECR2Q9BXF3 1484 aa15.43■□□□□ 0.06
MTR-204ENST00000470570 MROH2BQ7Z745 1585 aa15.43■□□□□ 0.06
MTR-204ENST00000470570 WIZO95785 1651 aa15.38■□□□□ 0.05
MTR-204ENST00000470570 EIF4G1Q04637 1599 aaKnown RBP15.38■□□□□ 0.05
MTR-204ENST00000470570 UNC13AQ9UPW8 1703 aa15.38■□□□□ 0.05
MTR-204ENST00000470570 BAZ1AQ9NRL2 1556 aaPredicted RBP15.36■□□□□ 0.05
MTR-204ENST00000470570 HRCP23327 699 aa15.35■□□□□ 0.05
MTR-204ENST00000470570 LOC105371045A0A1W2PR82 267 aa15.31■□□□□ 0.04
MTR-204ENST00000470570 SMARCA4P51532 1647 aa15.2■□□□□ 0.02
MTR-204ENST00000470570 PCGF6Q9BYE7 350 aa15.2■□□□□ 0.02
MTR-204ENST00000470570 TOP2AP11388 1531 aaKnown RBP15.17■□□□□ 0.02
MTR-204ENST00000470570 TRIM41Q8WV44 630 aa15.1■□□□□ 0.01
MTR-204ENST00000470570 SMARCA2P51531 1590 aa15.1■□□□□ 0.01
MTR-204ENST00000470570 BICRAQ9NZM4 1560 aa15.09■□□□□ 0.01
MTR-204ENST00000470570 TRIM26Q12899 539 aaPredicted RBP15.04■□□□□ -0
MTR-204ENST00000470570 PEG3Q9GZU2 1588 aa15.03■□□□□ -0
MTR-204ENST00000470570 CCDC88BA6NC98 1476 aa15.01□□□□□ -0.01
MTR-204ENST00000470570 ABCC8Q09428 1581 aa14.94□□□□□ -0.02
MTR-204ENST00000470570 PPARGC1BQ86YN6 1023 aaKnown RBP14.92□□□□□ -0.02
MTR-204ENST00000470570 FAM9AQ8IZU1 332 aaPredicted RBP14.85□□□□□ -0.03
MTR-204ENST00000470570 WRNQ14191 1432 aaPredicted RBP eCLIP14.78□□□□□ -0.04
MTR-204ENST00000470570 SOGA1O94964 1423 aa14.74□□□□□ -0.05
MTR-204ENST00000470570 EEA1Q15075 1411 aa14.73□□□□□ -0.05
MTR-204ENST00000470570 ATAD2BQ9ULI0 1458 aa14.72□□□□□ -0.05
MTR-204ENST00000470570 SYNJ1O43426 1573 aa14.72□□□□□ -0.05
MTR-204ENST00000470570 RUSC2Q8N2Y8 1516 aa14.7□□□□□ -0.06
MTR-204ENST00000470570 ZEB1P37275 1124 aaPredicted RBP14.68□□□□□ -0.06
MTR-204ENST00000470570 EHMT2Q96KQ7 1210 aa14.68□□□□□ -0.06
MTR-204ENST00000470570 TNIKQ9UKE5 1360 aa14.67□□□□□ -0.06
MTR-204ENST00000470570 KIF21BO75037 1637 aa14.67□□□□□ -0.06
MTR-204ENST00000470570 CEP162Q5TB80 1403 aa14.66□□□□□ -0.06
MTR-204ENST00000470570 PABPN1Q86U42 306 aaKnown RBP eCLIP14.65□□□□□ -0.06
MTR-204ENST00000470570 BAZ1BQ9UIG0 1483 aaKnown RBP14.61□□□□□ -0.07
MTR-204ENST00000470570 BIVM-ERCC5R4GMW8 1640 aa14.61□□□□□ -0.07
MTR-204ENST00000470570 GOLGA3Q08378 1498 aa14.59□□□□□ -0.07
MTR-204ENST00000470570 TOP2BQ02880 1626 aa14.58□□□□□ -0.08
MTR-204ENST00000470570 HMGXB3Q12766 1538 aa14.56□□□□□ -0.08
MTR-204ENST00000470570 CSRNP3Q8WYN3 585 aa14.55□□□□□ -0.08
MTR-204ENST00000470570 CEP164Q9UPV0 1460 aa14.52□□□□□ -0.08
MTR-204ENST00000470570 PRDM2Q13029 1718 aa14.49□□□□□ -0.09
MTR-204ENST00000470570 NCAPD3P42695 1498 aa14.48□□□□□ -0.09
MTR-204ENST00000470570 RAPGEF2Q9Y4G8 1499 aa14.41□□□□□ -0.1
MTR-204ENST00000470570 ERICH3Q5RHP9 1530 aa14.41□□□□□ -0.1
MTR-204ENST00000470570 CUX1P39880 1505 aa14.39□□□□□ -0.11
MTR-204ENST00000470570 PRXQ9BXM0 1461 aa14.37□□□□□ -0.11
MTR-204ENST00000470570 VPS8Q8N3P4 1428 aa14.36□□□□□ -0.11
MTR-204ENST00000470570 CFTRP13569 1480 aa14.35□□□□□ -0.11
MTR-204ENST00000470570 CLIP1P30622 1438 aa14.35□□□□□ -0.11
MTR-204ENST00000470570 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.35□□□□□ -0.11
MTR-204ENST00000470570 UBTFP17480 764 aaKnown RBP14.31□□□□□ -0.12
MTR-204ENST00000470570 ARAP1Q96P48 1450 aa14.28□□□□□ -0.12
MTR-204ENST00000470570 CCER1Q8TC90 406 aaPredicted RBP14.25□□□□□ -0.13
MTR-204ENST00000470570 RANGAP1P46060 587 aaPredicted RBP14.19□□□□□ -0.14
MTR-204ENST00000470570 KIF27Q86VH2 1401 aa14.17□□□□□ -0.14
MTR-204ENST00000470570 TTBK1Q5TCY1 1321 aaPredicted RBP14.16□□□□□ -0.14
MTR-204ENST00000470570 ARHGAP35Q9NRY4 1499 aa14.13□□□□□ -0.15
MTR-204ENST00000470570 CC2D2AQ9P2K1 1620 aa14.11□□□□□ -0.15
MTR-204ENST00000470570 SCAF1Q9H7N4 1312 aaKnown RBP14.1□□□□□ -0.15
MTR-204ENST00000470570 CUX2O14529 1486 aa14.09□□□□□ -0.15
MTR-204ENST00000470570 RRBP1Q9P2E9 1410 aaKnown RBP14.09□□□□□ -0.15
MTR-204ENST00000470570 CADPSQ9ULU8 1353 aa14.09□□□□□ -0.15
MTR-204ENST00000470570 MAP3K1Q13233 1512 aa14.07□□□□□ -0.16
MTR-204ENST00000470570 FGD5Q6ZNL6 1462 aa14.06□□□□□ -0.16
MTR-204ENST00000470570 IGF1RP08069 1367 aa14.05□□□□□ -0.16
MTR-204ENST00000470570 WDR97A6NE52 1622 aa14.04□□□□□ -0.16
MTR-204ENST00000470570 DIEXFQ68CQ4 756 aaKnown RBP14.04□□□□□ -0.16
MTR-204ENST00000470570 CFAP43Q8NDM7 1665 aa14.03□□□□□ -0.16
MTR-204ENST00000470570 TIAM1Q13009 1591 aa14.02□□□□□ -0.17
MTR-204ENST00000470570 DNMBPQ6XZF7 1577 aa14.02□□□□□ -0.17
MTR-204ENST00000470570 KANK4Q5T7N3 995 aaPredicted RBP14□□□□□ -0.17
MTR-204ENST00000470570 APLP2Q06481 763 aa14□□□□□ -0.17
MTR-204ENST00000470570 ZNF316A6NFI3 1004 aaPredicted RBP13.99□□□□□ -0.17
MTR-204ENST00000470570 DHX57Q6P158 1386 aaKnown RBP13.98□□□□□ -0.17
MTR-204ENST00000470570 HNRNPUL2Q1KMD3 747 aaKnown RBP13.98□□□□□ -0.17
MTR-204ENST00000470570 CLSPNQ9HAW4 1339 aa13.97□□□□□ -0.17
MTR-204ENST00000470570 ABCA10Q8WWZ4 1543 aa13.97□□□□□ -0.17
MTR-204ENST00000470570 FANCD2Q9BXW9 1451 aa13.97□□□□□ -0.17
MTR-204ENST00000470570 CTTNBP2Q8WZ74 1663 aa13.97□□□□□ -0.17
MTR-204ENST00000470570 ATP1B4Q9UN42 357 aaPredicted RBP13.96□□□□□ -0.17
MTR-204ENST00000470570 ACIN1Q9UKV3 1341 aaKnown RBP13.96□□□□□ -0.17
MTR-204ENST00000470570 CUL7Q14999 1698 aa13.96□□□□□ -0.18
MTR-204ENST00000470570 TOPBP1Q92547 1522 aa13.93□□□□□ -0.18
MTR-204ENST00000470570 NEUROD1Q13562 356 aa13.93□□□□□ -0.18
MTR-204ENST00000470570 PCF11O94913 1555 aaKnown RBP13.93□□□□□ -0.18
MTR-204ENST00000470570 CARMIL1Q5VZK9 1371 aa13.93□□□□□ -0.18
MTR-204ENST00000470570 POLA1P09884 1462 aaPredicted RBP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 137.2 ms