RNA–Protein interactions for RNA: ENST00000468790.1

CASP7-208, Transcript of caspase 7, humanhuman

TSL 2

Gene CASP7, Length 607 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP7-208ENST00000468790 AEBP2Q6ZN18 517 aaPredicted RBP23.23■■□□□ 1.31
CASP7-208ENST00000468790 NISCHQ9Y2I1 1504 aa23.09■■□□□ 1.29
CASP7-208ENST00000468790 CHIC1Q5VXU3 224 aa22.88■■□□□ 1.25
CASP7-208ENST00000468790 DNAJC5BQ9UF47 199 aa22.64■■□□□ 1.21
CASP7-208ENST00000468790 ABCC9O60706 1549 aa22.07■■□□□ 1.12
CASP7-208ENST00000468790 DNAJC5Q9H3Z4 198 aa22.07■■□□□ 1.12
CASP7-208ENST00000468790 CCDC180Q9P1Z9 1646 aa20.48■□□□□ 0.87
CASP7-208ENST00000468790 PABPN1Q86U42 306 aaKnown RBP eCLIP20.26■□□□□ 0.83
CASP7-208ENST00000468790 TRIM41Q8WV44 630 aa20.23■□□□□ 0.83
CASP7-208ENST00000468790 PHF23Q9BUL5 403 aaPredicted RBP20.21■□□□□ 0.83
CASP7-208ENST00000468790 CECR2Q9BXF3 1484 aa20.05■□□□□ 0.8
CASP7-208ENST00000468790 RB1CC1Q8TDY2 1594 aa20.02■□□□□ 0.8
CASP7-208ENST00000468790 CC2D2AQ9P2K1 1620 aa19.82■□□□□ 0.76
CASP7-208ENST00000468790 CUX2O14529 1486 aa19.73■□□□□ 0.75
CASP7-208ENST00000468790 BICRAQ9NZM4 1560 aa19.71■□□□□ 0.75
CASP7-208ENST00000468790 UNC13AQ9UPW8 1703 aa19.71■□□□□ 0.75
CASP7-208ENST00000468790 SENP3Q9H4L4 574 aaPredicted RBP19.57■□□□□ 0.72
CASP7-208ENST00000468790 NACADO15069 1562 aa19.41■□□□□ 0.7
CASP7-208ENST00000468790 ZCCHC6Q5VYS8 1495 aaKnown RBP19.39■□□□□ 0.69
CASP7-208ENST00000468790 EIF4G1Q04637 1599 aaKnown RBP19.28■□□□□ 0.68
CASP7-208ENST00000468790 ILDR1Q86SU0 546 aaPredicted RBP19.28■□□□□ 0.68
CASP7-208ENST00000468790 DCAF1Q9Y4B6 1507 aa19.2■□□□□ 0.66
CASP7-208ENST00000468790 MYO15BQ96JP2 1530 aa19.09■□□□□ 0.65
CASP7-208ENST00000468790 ERCC6Q03468 1493 aa19.07■□□□□ 0.64
CASP7-208ENST00000468790 SHROOM4Q9ULL8 1493 aa19■□□□□ 0.63
CASP7-208ENST00000468790 DCAF8L2P0C7V8 631 aa18.88■□□□□ 0.61
CASP7-208ENST00000468790 PLPPR3Q6T4P5 718 aa18.64■□□□□ 0.57
CASP7-208ENST00000468790 THOC2Q8NI27 1593 aaKnown RBP18.63■□□□□ 0.57
CASP7-208ENST00000468790 SCRIBQ14160 1630 aa18.62■□□□□ 0.57
CASP7-208ENST00000468790 TRHP20396 242 aaPredicted RBP18.6■□□□□ 0.57
CASP7-208ENST00000468790 RIMBP3CA6NJZ7 1639 aa18.57■□□□□ 0.56
CASP7-208ENST00000468790 RIMBP3BA6NNM3 1639 aa18.57■□□□□ 0.56
CASP7-208ENST00000468790 RIMBP3Q9UFD9 1639 aa18.57■□□□□ 0.56
CASP7-208ENST00000468790 OSCARQ8IYS5 282 aa18.49■□□□□ 0.55
CASP7-208ENST00000468790 NESP48681 1621 aa18.46■□□□□ 0.55
CASP7-208ENST00000468790 BAZ1AQ9NRL2 1556 aaPredicted RBP18.46■□□□□ 0.55
CASP7-208ENST00000468790 ARHGEF11O15085 1522 aa18.29■□□□□ 0.52
CASP7-208ENST00000468790 CYB5RLQ6IPT4 315 aa18.25■□□□□ 0.51
CASP7-208ENST00000468790 SMARCA2P51531 1590 aa18.25■□□□□ 0.51
CASP7-208ENST00000468790 FOXD1Q16676 465 aa18.2■□□□□ 0.5
CASP7-208ENST00000468790 KIF21AQ7Z4S6 1674 aa18.09■□□□□ 0.49
CASP7-208ENST00000468790 LMTK3Q96Q04 1460 aa18.04■□□□□ 0.48
CASP7-208ENST00000468790 SOCS7O14512 581 aa18.03■□□□□ 0.48
CASP7-208ENST00000468790 ARAP1Q96P48 1450 aa18.02■□□□□ 0.48
CASP7-208ENST00000468790 NCAPD3P42695 1498 aa18.01■□□□□ 0.47
CASP7-208ENST00000468790 ILDR2Q71H61 639 aa17.94■□□□□ 0.46
CASP7-208ENST00000468790 SMARCA4P51532 1647 aa17.88■□□□□ 0.45
CASP7-208ENST00000468790 FBXO41Q8TF61 875 aa17.87■□□□□ 0.45
CASP7-208ENST00000468790 WDR62O43379 1518 aa17.87■□□□□ 0.45
CASP7-208ENST00000468790 KDM4FA0A1W2PPD8 638 aa17.86■□□□□ 0.45
CASP7-208ENST00000468790 LAMC3Q9Y6N6 1575 aa17.85■□□□□ 0.45
CASP7-208ENST00000468790 MRC2Q9UBG0 1479 aa17.82■□□□□ 0.44
CASP7-208ENST00000468790 MROH2BQ7Z745 1585 aa17.79■□□□□ 0.44
CASP7-208ENST00000468790 PDS5BQ9NTI5 1447 aa17.79■□□□□ 0.44
CASP7-208ENST00000468790 PPP6R1Q9UPN7 881 aa17.74■□□□□ 0.43
CASP7-208ENST00000468790 RSF1Q96T23 1441 aaPredicted RBP17.72■□□□□ 0.43
CASP7-208ENST00000468790 PEG3Q9GZU2 1588 aa17.71■□□□□ 0.43
CASP7-208ENST00000468790 ATAD2BQ9ULI0 1458 aa17.7■□□□□ 0.42
CASP7-208ENST00000468790 ERCC6L2Q5T890 1561 aa17.7■□□□□ 0.42
CASP7-208ENST00000468790 ADRA2BP18089 450 aa17.69■□□□□ 0.42
CASP7-208ENST00000468790 WIZO95785 1651 aa17.68■□□□□ 0.42
CASP7-208ENST00000468790 HMGXB3Q12766 1538 aa17.66■□□□□ 0.42
CASP7-208ENST00000468790 HECW2Q9P2P5 1572 aa17.57■□□□□ 0.4
CASP7-208ENST00000468790 TOP2AP11388 1531 aaKnown RBP17.54■□□□□ 0.4
CASP7-208ENST00000468790 SUPT5HO00267 1087 aaKnown RBP17.53■□□□□ 0.4
CASP7-208ENST00000468790 DISP3Q9P2K9 1392 aa17.49■□□□□ 0.39
CASP7-208ENST00000468790 BAZ1BQ9UIG0 1483 aaKnown RBP17.47■□□□□ 0.39
CASP7-208ENST00000468790 ZNF608Q9ULD9 1512 aaPredicted RBP17.37■□□□□ 0.37
CASP7-208ENST00000468790 CADPSQ9ULU8 1353 aa17.34■□□□□ 0.37
CASP7-208ENST00000468790 CHD1O14646 1710 aa17.33■□□□□ 0.37
CASP7-208ENST00000468790 SYNJ2O15056 1496 aa17.33■□□□□ 0.37
CASP7-208ENST00000468790 CEP164Q9UPV0 1460 aa17.31■□□□□ 0.36
CASP7-208ENST00000468790 CCDC88BA6NC98 1476 aa17.24■□□□□ 0.35
CASP7-208ENST00000468790 URB2Q14146 1524 aaKnown RBP17.23■□□□□ 0.35
CASP7-208ENST00000468790 KIF13AQ9H1H9 1805 aa17.23■□□□□ 0.35
CASP7-208ENST00000468790 PRDM2Q13029 1718 aa17.16■□□□□ 0.34
CASP7-208ENST00000468790 ADGRL1O94910 1474 aa17.16■□□□□ 0.34
CASP7-208ENST00000468790 FANCD2Q9BXW9 1451 aa17.16■□□□□ 0.34
CASP7-208ENST00000468790 PIAS4Q8N2W9 510 aaPredicted RBP17.15■□□□□ 0.34
CASP7-208ENST00000468790 CLASP1Q7Z460 1538 aa17.12■□□□□ 0.33
CASP7-208ENST00000468790 SPATA31D1Q6ZQQ2 1576 aa17.12■□□□□ 0.33
CASP7-208ENST00000468790 EIF4G3O43432 1585 aaKnown RBP17.08■□□□□ 0.32
CASP7-208ENST00000468790 FBLN2P98095 1184 aa17.07■□□□□ 0.32
CASP7-208ENST00000468790 GAPVD1Q14C86 1478 aa17.05■□□□□ 0.32
CASP7-208ENST00000468790 IFT140Q96RY7 1462 aa17.05■□□□□ 0.32
CASP7-208ENST00000468790 KDM6BO15054 1643 aa17.02■□□□□ 0.31
CASP7-208ENST00000468790 CFTRP13569 1480 aa17■□□□□ 0.31
CASP7-208ENST00000468790 AQRO60306 1485 aaKnown RBP eCLIP16.92■□□□□ 0.3
CASP7-208ENST00000468790 FAM69CQ0P6D2 419 aa16.83■□□□□ 0.28
CASP7-208ENST00000468790 SYNJ1O43426 1573 aa16.8■□□□□ 0.28
CASP7-208ENST00000468790 ABCC8Q09428 1581 aa16.8■□□□□ 0.28
CASP7-208ENST00000468790 ABCC10Q5T3U5 1492 aa16.8■□□□□ 0.28
CASP7-208ENST00000468790 BIVM-ERCC5R4GMW8 1640 aa16.78■□□□□ 0.28
CASP7-208ENST00000468790 CERKQ8TCT0 537 aa16.74■□□□□ 0.27
CASP7-208ENST00000468790 TOP2BQ02880 1626 aa16.73■□□□□ 0.27
CASP7-208ENST00000468790 WRNQ14191 1432 aaPredicted RBP eCLIP16.72■□□□□ 0.27
CASP7-208ENST00000468790 DIP2BQ9P265 1576 aa16.72■□□□□ 0.27
CASP7-208ENST00000468790 DNMBPQ6XZF7 1577 aa16.69■□□□□ 0.26
CASP7-208ENST00000468790 TARBP1Q13395 1621 aaKnown RBP16.68■□□□□ 0.26
CASP7-208ENST00000468790 TSPOAP1O95153 1857 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms