RNA–Protein interactions for RNA: ENST00000468466.1

ARHGEF3-205, Transcript of Rho guanine nucleotide exchange factor 3, humanhuman

TSL 4

Gene ARHGEF3, Length 514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3-205ENST00000468466 NISCHQ9Y2I1 1504 aa11.34□□□□□ -0.59
ARHGEF3-205ENST00000468466 AEBP2Q6ZN18 517 aaPredicted RBP10.53□□□□□ -0.72
ARHGEF3-205ENST00000468466 CHIC1Q5VXU3 224 aa10.47□□□□□ -0.73
ARHGEF3-205ENST00000468466 CCDC180Q9P1Z9 1646 aa9.75□□□□□ -0.85
ARHGEF3-205ENST00000468466 ZCCHC6Q5VYS8 1495 aaKnown RBP9.57□□□□□ -0.88
ARHGEF3-205ENST00000468466 DCAF1Q9Y4B6 1507 aa9.44□□□□□ -0.9
ARHGEF3-205ENST00000468466 PELP1Q8IZL8 1130 aaKnown RBP9.31□□□□□ -0.92
ARHGEF3-205ENST00000468466 SHROOM4Q9ULL8 1493 aa9.29□□□□□ -0.92
ARHGEF3-205ENST00000468466 MYO15BQ96JP2 1530 aa9.29□□□□□ -0.92
ARHGEF3-205ENST00000468466 DCAF8L2P0C7V8 631 aa9.24□□□□□ -0.93
ARHGEF3-205ENST00000468466 MYT1Q01538 1121 aa9.19□□□□□ -0.94
ARHGEF3-205ENST00000468466 POTEDQ86YR6 584 aa9.19□□□□□ -0.94
ARHGEF3-205ENST00000468466 PHF23Q9BUL5 403 aaPredicted RBP9.12□□□□□ -0.95
ARHGEF3-205ENST00000468466 NACADO15069 1562 aa9.11□□□□□ -0.95
ARHGEF3-205ENST00000468466 SENP3Q9H4L4 574 aaPredicted RBP9.08□□□□□ -0.96
ARHGEF3-205ENST00000468466 SUPT5HO00267 1087 aaKnown RBP9.07□□□□□ -0.96
ARHGEF3-205ENST00000468466 ABCC9O60706 1549 aa9.03□□□□□ -0.96
ARHGEF3-205ENST00000468466 RB1CC1Q8TDY2 1594 aa8.95□□□□□ -0.98
ARHGEF3-205ENST00000468466 SCRIBQ14160 1630 aa8.93□□□□□ -0.98
ARHGEF3-205ENST00000468466 RSF1Q96T23 1441 aaPredicted RBP8.88□□□□□ -0.99
ARHGEF3-205ENST00000468466 TTBK1Q5TCY1 1321 aaPredicted RBP8.79□□□□□ -1
ARHGEF3-205ENST00000468466 HRCP23327 699 aa8.77□□□□□ -1.01
ARHGEF3-205ENST00000468466 BAZ1AQ9NRL2 1556 aaPredicted RBP8.74□□□□□ -1.01
ARHGEF3-205ENST00000468466 CECR2Q9BXF3 1484 aa8.74□□□□□ -1.01
ARHGEF3-205ENST00000468466 MROH2BQ7Z745 1585 aa8.72□□□□□ -1.01
ARHGEF3-205ENST00000468466 PLPPR3Q6T4P5 718 aa8.68□□□□□ -1.02
ARHGEF3-205ENST00000468466 SMARCA4P51532 1647 aa8.62□□□□□ -1.03
ARHGEF3-205ENST00000468466 BICRAQ9NZM4 1560 aa8.61□□□□□ -1.03
ARHGEF3-205ENST00000468466 TOP2AP11388 1531 aaKnown RBP8.61□□□□□ -1.03
ARHGEF3-205ENST00000468466 TRIM41Q8WV44 630 aa8.59□□□□□ -1.03
ARHGEF3-205ENST00000468466 WIZO95785 1651 aa8.59□□□□□ -1.03
ARHGEF3-205ENST00000468466 PEG3Q9GZU2 1588 aa8.57□□□□□ -1.04
ARHGEF3-205ENST00000468466 PABPN1Q86U42 306 aaKnown RBP eCLIP8.56□□□□□ -1.04
ARHGEF3-205ENST00000468466 UNC13AQ9UPW8 1703 aa8.55□□□□□ -1.04
ARHGEF3-205ENST00000468466 FOXD1Q16676 465 aa8.54□□□□□ -1.04
ARHGEF3-205ENST00000468466 CCDC88BA6NC98 1476 aa8.51□□□□□ -1.05
ARHGEF3-205ENST00000468466 SMARCA2P51531 1590 aa8.51□□□□□ -1.05
ARHGEF3-205ENST00000468466 ATAD2BQ9ULI0 1458 aa8.5□□□□□ -1.05
ARHGEF3-205ENST00000468466 EIF4G1Q04637 1599 aaKnown RBP8.49□□□□□ -1.05
ARHGEF3-205ENST00000468466 BAZ1BQ9UIG0 1483 aaKnown RBP8.45□□□□□ -1.06
ARHGEF3-205ENST00000468466 LOC105371045A0A1W2PR82 267 aa8.44□□□□□ -1.06
ARHGEF3-205ENST00000468466 ZEB1P37275 1124 aaPredicted RBP8.43□□□□□ -1.06
ARHGEF3-205ENST00000468466 NCAPD3P42695 1498 aa8.43□□□□□ -1.06
ARHGEF3-205ENST00000468466 EEA1Q15075 1411 aa8.41□□□□□ -1.06
ARHGEF3-205ENST00000468466 HMGXB3Q12766 1538 aa8.4□□□□□ -1.06
ARHGEF3-205ENST00000468466 WRNQ14191 1432 aaPredicted RBP eCLIP8.36□□□□□ -1.07
ARHGEF3-205ENST00000468466 FAM9AQ8IZU1 332 aaPredicted RBP8.34□□□□□ -1.07
ARHGEF3-205ENST00000468466 TRIM26Q12899 539 aaPredicted RBP8.32□□□□□ -1.08
ARHGEF3-205ENST00000468466 ABCC8Q09428 1581 aa8.31□□□□□ -1.08
ARHGEF3-205ENST00000468466 SCAF1Q9H7N4 1312 aaKnown RBP8.3□□□□□ -1.08
ARHGEF3-205ENST00000468466 CSRNP3Q8WYN3 585 aa8.29□□□□□ -1.08
ARHGEF3-205ENST00000468466 PCGF6Q9BYE7 350 aa8.29□□□□□ -1.08
ARHGEF3-205ENST00000468466 CFTRP13569 1480 aa8.28□□□□□ -1.08
ARHGEF3-205ENST00000468466 TNIKQ9UKE5 1360 aa8.28□□□□□ -1.08
ARHGEF3-205ENST00000468466 SOGA1O94964 1423 aa8.28□□□□□ -1.08
ARHGEF3-205ENST00000468466 MSH5O43196 834 aa8.25□□□□□ -1.09
ARHGEF3-205ENST00000468466 GOLGA3Q08378 1498 aa8.25□□□□□ -1.09
ARHGEF3-205ENST00000468466 CEP164Q9UPV0 1460 aa8.23□□□□□ -1.09
ARHGEF3-205ENST00000468466 CADPSQ9ULU8 1353 aa8.22□□□□□ -1.09
ARHGEF3-205ENST00000468466 SYNJ1O43426 1573 aa8.22□□□□□ -1.09
ARHGEF3-205ENST00000468466 TOP2BQ02880 1626 aa8.22□□□□□ -1.09
ARHGEF3-205ENST00000468466 PPARGC1BQ86YN6 1023 aaKnown RBP8.22□□□□□ -1.09
ARHGEF3-205ENST00000468466 CEP162Q5TB80 1403 aa8.2□□□□□ -1.1
ARHGEF3-205ENST00000468466 KIF21BO75037 1637 aa8.19□□□□□ -1.1
ARHGEF3-205ENST00000468466 CENPBP07199 599 aaPredicted RBP8.19□□□□□ -1.1
ARHGEF3-205ENST00000468466 ACIN1Q9UKV3 1341 aaKnown RBP8.19□□□□□ -1.1
ARHGEF3-205ENST00000468466 RUSC2Q8N2Y8 1516 aa8.18□□□□□ -1.1
ARHGEF3-205ENST00000468466 BIVM-ERCC5R4GMW8 1640 aa8.18□□□□□ -1.1
ARHGEF3-205ENST00000468466 UBTFP17480 764 aaKnown RBP8.17□□□□□ -1.1
ARHGEF3-205ENST00000468466 ERICH6Q7L0X2 663 aa8.17□□□□□ -1.1
ARHGEF3-205ENST00000468466 KIF27Q86VH2 1401 aa8.16□□□□□ -1.1
ARHGEF3-205ENST00000468466 CC2D2AQ9P2K1 1620 aa8.16□□□□□ -1.1
ARHGEF3-205ENST00000468466 CUX1P39880 1505 aa8.15□□□□□ -1.1
ARHGEF3-205ENST00000468466 PRXQ9BXM0 1461 aa8.14□□□□□ -1.11
ARHGEF3-205ENST00000468466 EHMT2Q96KQ7 1210 aa8.14□□□□□ -1.11
ARHGEF3-205ENST00000468466 ERICH3Q5RHP9 1530 aa8.13□□□□□ -1.11
ARHGEF3-205ENST00000468466 CLIP1P30622 1438 aa8.11□□□□□ -1.11
ARHGEF3-205ENST00000468466 FANCD2Q9BXW9 1451 aa8.09□□□□□ -1.11
ARHGEF3-205ENST00000468466 RAPGEF2Q9Y4G8 1499 aa8.09□□□□□ -1.11
ARHGEF3-205ENST00000468466 VPS8Q8N3P4 1428 aa8.07□□□□□ -1.12
ARHGEF3-205ENST00000468466 IGF1RP08069 1367 aa8.06□□□□□ -1.12
ARHGEF3-205ENST00000468466 PRDM2Q13029 1718 aa8.06□□□□□ -1.12
ARHGEF3-205ENST00000468466 LAMC3Q9Y6N6 1575 aa8.05□□□□□ -1.12
ARHGEF3-205ENST00000468466 CUX2O14529 1486 aa8.05□□□□□ -1.12
ARHGEF3-205ENST00000468466 PDS5BQ9NTI5 1447 aa8.04□□□□□ -1.12
ARHGEF3-205ENST00000468466 FGD5Q6ZNL6 1462 aa8.04□□□□□ -1.12
ARHGEF3-205ENST00000468466 DNMBPQ6XZF7 1577 aa8.04□□□□□ -1.12
ARHGEF3-205ENST00000468466 APLP2Q06481 763 aa8.03□□□□□ -1.12
ARHGEF3-205ENST00000468466 CLSPNQ9HAW4 1339 aa8.03□□□□□ -1.12
ARHGEF3-205ENST00000468466 ABCA10Q8WWZ4 1543 aa8.02□□□□□ -1.13
ARHGEF3-205ENST00000468466 CARMIL1Q5VZK9 1371 aa8.01□□□□□ -1.13
ARHGEF3-205ENST00000468466 BCL11AQ9H165 835 aa8.01□□□□□ -1.13
ARHGEF3-205ENST00000468466 GTF3C3Q9Y5Q9 886 aa8.01□□□□□ -1.13
ARHGEF3-205ENST00000468466 TOPBP1Q92547 1522 aa8.01□□□□□ -1.13
ARHGEF3-205ENST00000468466 ADRA2BP18089 450 aa8□□□□□ -1.13
ARHGEF3-205ENST00000468466 NEUROD1Q13562 356 aa7.99□□□□□ -1.13
ARHGEF3-205ENST00000468466 POLA1P09884 1462 aaPredicted RBP7.99□□□□□ -1.13
ARHGEF3-205ENST00000468466 NESP48681 1621 aa7.96□□□□□ -1.13
ARHGEF3-205ENST00000468466 ARAP1Q96P48 1450 aa7.96□□□□□ -1.13
ARHGEF3-205ENST00000468466 PPP6R1Q9UPN7 881 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms