RNA–Protein interactions for RNA: ENST00000467735.2

SH3GL3-203, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

TSL 2

Gene SH3GL3, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-203ENST00000467735 AEBP2Q6ZN18 517 aaPredicted RBP23.07■■□□□ 1.28
SH3GL3-203ENST00000467735 CHIC1Q5VXU3 224 aa22.46■■□□□ 1.19
SH3GL3-203ENST00000467735 NISCHQ9Y2I1 1504 aa20.68■□□□□ 0.9
SH3GL3-203ENST00000467735 PHF23Q9BUL5 403 aaPredicted RBP19.84■□□□□ 0.77
SH3GL3-203ENST00000467735 SENP3Q9H4L4 574 aaPredicted RBP19.42■□□□□ 0.7
SH3GL3-203ENST00000467735 CCDC180Q9P1Z9 1646 aa18.46■□□□□ 0.55
SH3GL3-203ENST00000467735 ABCC9O60706 1549 aa18.39■□□□□ 0.54
SH3GL3-203ENST00000467735 PLPPR3Q6T4P5 718 aa18.2■□□□□ 0.5
SH3GL3-203ENST00000467735 FOXD1Q16676 465 aa18.12■□□□□ 0.49
SH3GL3-203ENST00000467735 RB1CC1Q8TDY2 1594 aa17.52■□□□□ 0.39
SH3GL3-203ENST00000467735 PPP6R1Q9UPN7 881 aa17.51■□□□□ 0.39
SH3GL3-203ENST00000467735 ADRA2BP18089 450 aa17.48■□□□□ 0.39
SH3GL3-203ENST00000467735 DCAF8L2P0C7V8 631 aa17.43■□□□□ 0.38
SH3GL3-203ENST00000467735 NACADO15069 1562 aa17.42■□□□□ 0.38
SH3GL3-203ENST00000467735 MYO15BQ96JP2 1530 aa17.2■□□□□ 0.34
SH3GL3-203ENST00000467735 ZCCHC6Q5VYS8 1495 aaKnown RBP17.18■□□□□ 0.34
SH3GL3-203ENST00000467735 PABPN1Q86U42 306 aaKnown RBP eCLIP17.15■□□□□ 0.34
SH3GL3-203ENST00000467735 UNC13AQ9UPW8 1703 aa17.11■□□□□ 0.33
SH3GL3-203ENST00000467735 DNAJC5BQ9UF47 199 aa17.1■□□□□ 0.33
SH3GL3-203ENST00000467735 PIAS4Q8N2W9 510 aaPredicted RBP17.06■□□□□ 0.32
SH3GL3-203ENST00000467735 DCAF1Q9Y4B6 1507 aa17.05■□□□□ 0.32
SH3GL3-203ENST00000467735 BICRAQ9NZM4 1560 aa17.02■□□□□ 0.31
SH3GL3-203ENST00000467735 SCRIBQ14160 1630 aa16.91■□□□□ 0.3
SH3GL3-203ENST00000467735 SHROOM4Q9ULL8 1493 aa16.76■□□□□ 0.27
SH3GL3-203ENST00000467735 EIF4G1Q04637 1599 aaKnown RBP16.6■□□□□ 0.25
SH3GL3-203ENST00000467735 CC2D2AQ9P2K1 1620 aa16.59■□□□□ 0.25
SH3GL3-203ENST00000467735 MSH5O43196 834 aa16.58■□□□□ 0.24
SH3GL3-203ENST00000467735 CECR2Q9BXF3 1484 aa16.54■□□□□ 0.24
SH3GL3-203ENST00000467735 SMARCA4P51532 1647 aa16.1■□□□□ 0.17
SH3GL3-203ENST00000467735 PPP4R3CPQ6ZMV5 832 aa16.1■□□□□ 0.17
SH3GL3-203ENST00000467735 NCAPD3P42695 1498 aa16.09■□□□□ 0.17
SH3GL3-203ENST00000467735 ATAD2BQ9ULI0 1458 aa16.08■□□□□ 0.16
SH3GL3-203ENST00000467735 BAZ1AQ9NRL2 1556 aaPredicted RBP16.04■□□□□ 0.16
SH3GL3-203ENST00000467735 SMARCA2P51531 1590 aa16.03■□□□□ 0.16
SH3GL3-203ENST00000467735 HMGXB3Q12766 1538 aa15.99■□□□□ 0.15
SH3GL3-203ENST00000467735 MROH2BQ7Z745 1585 aa15.96■□□□□ 0.14
SH3GL3-203ENST00000467735 DNAJC5Q9H3Z4 198 aa15.95■□□□□ 0.14
SH3GL3-203ENST00000467735 BAZ1BQ9UIG0 1483 aaKnown RBP15.95■□□□□ 0.14
SH3GL3-203ENST00000467735 PEG3Q9GZU2 1588 aa15.92■□□□□ 0.14
SH3GL3-203ENST00000467735 MAPK8IP2Q13387 824 aaPredicted RBP15.88■□□□□ 0.13
SH3GL3-203ENST00000467735 ERCC6Q03468 1493 aa15.86■□□□□ 0.13
SH3GL3-203ENST00000467735 NESP48681 1621 aa15.84■□□□□ 0.13
SH3GL3-203ENST00000467735 KCNA4P22459 653 aa15.81■□□□□ 0.12
SH3GL3-203ENST00000467735 SCAF1Q9H7N4 1312 aaKnown RBP15.8■□□□□ 0.12
SH3GL3-203ENST00000467735 WIZO95785 1651 aa15.76■□□□□ 0.11
SH3GL3-203ENST00000467735 CUX2O14529 1486 aa15.74■□□□□ 0.11
SH3GL3-203ENST00000467735 LAMC3Q9Y6N6 1575 aa15.7■□□□□ 0.1
SH3GL3-203ENST00000467735 RSF1Q96T23 1441 aaPredicted RBP15.67■□□□□ 0.1
SH3GL3-203ENST00000467735 THOC2Q8NI27 1593 aaKnown RBP15.63■□□□□ 0.09
SH3GL3-203ENST00000467735 KIF21AQ7Z4S6 1674 aa15.62■□□□□ 0.09
SH3GL3-203ENST00000467735 CADPSQ9ULU8 1353 aa15.62■□□□□ 0.09
SH3GL3-203ENST00000467735 PDS5BQ9NTI5 1447 aa15.61■□□□□ 0.09
SH3GL3-203ENST00000467735 CNKSR2Q8WXI2 1034 aa15.58■□□□□ 0.08
SH3GL3-203ENST00000467735 TOP2AP11388 1531 aaKnown RBP15.58■□□□□ 0.08
SH3GL3-203ENST00000467735 NCBP3Q53F19 620 aaKnown RBP15.57■□□□□ 0.08
SH3GL3-203ENST00000467735 DMRT2Q9Y5R5 561 aa15.55■□□□□ 0.08
SH3GL3-203ENST00000467735 MRC2Q9UBG0 1479 aa15.5■□□□□ 0.07
SH3GL3-203ENST00000467735 NPM3O75607 178 aaKnown RBP15.48■□□□□ 0.07
SH3GL3-203ENST00000467735 CFTRP13569 1480 aa15.46■□□□□ 0.07
SH3GL3-203ENST00000467735 FANCD2Q9BXW9 1451 aa15.46■□□□□ 0.07
SH3GL3-203ENST00000467735 CEP164Q9UPV0 1460 aa15.46■□□□□ 0.07
SH3GL3-203ENST00000467735 WDR62O43379 1518 aa15.44■□□□□ 0.06
SH3GL3-203ENST00000467735 CCDC88BA6NC98 1476 aa15.4■□□□□ 0.06
SH3GL3-203ENST00000467735 URB2Q14146 1524 aaKnown RBP15.33■□□□□ 0.05
SH3GL3-203ENST00000467735 PRDM2Q13029 1718 aa15.29■□□□□ 0.04
SH3GL3-203ENST00000467735 RNF216Q9NWF9 866 aaPredicted RBP15.27■□□□□ 0.04
SH3GL3-203ENST00000467735 HOXD11P31277 338 aaPredicted RBP15.23■□□□□ 0.03
SH3GL3-203ENST00000467735 TOPBP1Q92547 1522 aa15.18■□□□□ 0.02
SH3GL3-203ENST00000467735 POTEDQ86YR6 584 aa15.16■□□□□ 0.02
SH3GL3-203ENST00000467735 IFT140Q96RY7 1462 aa15.14■□□□□ 0.01
SH3GL3-203ENST00000467735 DNMBPQ6XZF7 1577 aa15.13■□□□□ 0.01
SH3GL3-203ENST00000467735 ZNF608Q9ULD9 1512 aaPredicted RBP15.12■□□□□ 0.01
SH3GL3-203ENST00000467735 SUPT5HO00267 1087 aaKnown RBP15.12■□□□□ 0.01
SH3GL3-203ENST00000467735 ABCC8Q09428 1581 aa15.11■□□□□ 0.01
SH3GL3-203ENST00000467735 EIF4G3O43432 1585 aaKnown RBP15.05■□□□□ -0
SH3GL3-203ENST00000467735 POLA1P09884 1462 aaPredicted RBP15.04■□□□□ -0
SH3GL3-203ENST00000467735 OSCARQ8IYS5 282 aa15.04■□□□□ -0
SH3GL3-203ENST00000467735 TARBP1Q13395 1621 aaKnown RBP15.03■□□□□ -0
SH3GL3-203ENST00000467735 TRIM41Q8WV44 630 aa15.02■□□□□ -0
SH3GL3-203ENST00000467735 SLC4A1APQ9BWU0 796 aaKnown RBP15□□□□□ -0.01
SH3GL3-203ENST00000467735 AQRO60306 1485 aaKnown RBP eCLIP15□□□□□ -0.01
SH3GL3-203ENST00000467735 RAD54L2Q9Y4B4 1467 aa15□□□□□ -0.01
SH3GL3-203ENST00000467735 CUX1P39880 1505 aa14.98□□□□□ -0.01
SH3GL3-203ENST00000467735 FGD5Q6ZNL6 1462 aa14.98□□□□□ -0.01
SH3GL3-203ENST00000467735 SOGA1O94964 1423 aa14.96□□□□□ -0.01
SH3GL3-203ENST00000467735 TDRD9Q8NDG6 1382 aaKnown RBP14.94□□□□□ -0.02
SH3GL3-203ENST00000467735 DCAF8L1A6NGE4 600 aa14.91□□□□□ -0.02
SH3GL3-203ENST00000467735 FBLN2P98095 1184 aa14.89□□□□□ -0.03
SH3GL3-203ENST00000467735 CHD1O14646 1710 aa14.89□□□□□ -0.03
SH3GL3-203ENST00000467735 SNAPC4Q5SXM2 1469 aa14.87□□□□□ -0.03
SH3GL3-203ENST00000467735 RIMBP3CA6NJZ7 1639 aa14.86□□□□□ -0.03
SH3GL3-203ENST00000467735 RIMBP3BA6NNM3 1639 aa14.86□□□□□ -0.03
SH3GL3-203ENST00000467735 RIMBP3Q9UFD9 1639 aa14.86□□□□□ -0.03
SH3GL3-203ENST00000467735 WDR97A6NE52 1622 aa14.84□□□□□ -0.03
SH3GL3-203ENST00000467735 ARHGEF11O15085 1522 aa14.83□□□□□ -0.04
SH3GL3-203ENST00000467735 GRIN2BQ13224 1484 aa14.82□□□□□ -0.04
SH3GL3-203ENST00000467735 MAGI1Q96QZ7 1491 aaPredicted RBP14.8□□□□□ -0.04
SH3GL3-203ENST00000467735 GAPVD1Q14C86 1478 aa14.79□□□□□ -0.04
SH3GL3-203ENST00000467735 SYNJ1O43426 1573 aa14.78□□□□□ -0.04
SH3GL3-203ENST00000467735 ABCA10Q8WWZ4 1543 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms