RNA–Protein interactions for RNA: ENST00000465993.5

PCGF1-203, Transcript of polycomb group ring finger 1, humanhuman

TSL 3

Gene PCGF1, Length 587 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1-203ENST00000465993 AEBP2Q6ZN18 517 aaPredicted RBP19.9■□□□□ 0.78
PCGF1-203ENST00000465993 CHIC1Q5VXU3 224 aa18.84■□□□□ 0.61
PCGF1-203ENST00000465993 SENP3Q9H4L4 574 aaPredicted RBP17.33■□□□□ 0.36
PCGF1-203ENST00000465993 PHF23Q9BUL5 403 aaPredicted RBP16.9■□□□□ 0.3
PCGF1-203ENST00000465993 POTEDQ86YR6 584 aa16.56■□□□□ 0.24
PCGF1-203ENST00000465993 FOXD1Q16676 465 aa16.13■□□□□ 0.17
PCGF1-203ENST00000465993 MSH5O43196 834 aa15.6■□□□□ 0.09
PCGF1-203ENST00000465993 NISCHQ9Y2I1 1504 aa15.48■□□□□ 0.07
PCGF1-203ENST00000465993 PIAS4Q8N2W9 510 aaPredicted RBP14.94□□□□□ -0.02
PCGF1-203ENST00000465993 ABCC9O60706 1549 aa14.41□□□□□ -0.1
PCGF1-203ENST00000465993 PPP6R1Q9UPN7 881 aa14.32□□□□□ -0.12
PCGF1-203ENST00000465993 ADRA2BP18089 450 aa14.27□□□□□ -0.13
PCGF1-203ENST00000465993 PLPPR3Q6T4P5 718 aa14.22□□□□□ -0.13
PCGF1-203ENST00000465993 CCDC180Q9P1Z9 1646 aa13.93□□□□□ -0.18
PCGF1-203ENST00000465993 CACNB1Q02641 598 aaPredicted RBP13.88□□□□□ -0.19
PCGF1-203ENST00000465993 DNAJC5BQ9UF47 199 aa13.87□□□□□ -0.19
PCGF1-203ENST00000465993 DMRT2Q9Y5R5 561 aa13.55□□□□□ -0.24
PCGF1-203ENST00000465993 RB1CC1Q8TDY2 1594 aa13.45□□□□□ -0.26
PCGF1-203ENST00000465993 PABPN1Q86U42 306 aaKnown RBP eCLIP13.44□□□□□ -0.26
PCGF1-203ENST00000465993 DCAF8L2P0C7V8 631 aa13.36□□□□□ -0.27
PCGF1-203ENST00000465993 MAPK8IP2Q13387 824 aaPredicted RBP13.33□□□□□ -0.28
PCGF1-203ENST00000465993 SCAF1Q9H7N4 1312 aaKnown RBP13.32□□□□□ -0.28
PCGF1-203ENST00000465993 NACADO15069 1562 aa13.28□□□□□ -0.28
PCGF1-203ENST00000465993 UNC13AQ9UPW8 1703 aa13.2□□□□□ -0.3
PCGF1-203ENST00000465993 BICRAQ9NZM4 1560 aa13.15□□□□□ -0.3
PCGF1-203ENST00000465993 RNF39Q9H2S5 420 aa13.12□□□□□ -0.31
PCGF1-203ENST00000465993 DCAF8L1A6NGE4 600 aa13.08□□□□□ -0.32
PCGF1-203ENST00000465993 C1QBPQ07021 282 aaKnown RBP12.98□□□□□ -0.33
PCGF1-203ENST00000465993 CECR2Q9BXF3 1484 aa12.97□□□□□ -0.33
PCGF1-203ENST00000465993 CC2D2AQ9P2K1 1620 aa12.95□□□□□ -0.34
PCGF1-203ENST00000465993 MYO15BQ96JP2 1530 aa12.93□□□□□ -0.34
PCGF1-203ENST00000465993 POTEHQ6S545 545 aa12.86□□□□□ -0.35
PCGF1-203ENST00000465993 DNAJC5Q9H3Z4 198 aa12.85□□□□□ -0.35
PCGF1-203ENST00000465993 SCRIBQ14160 1630 aa12.83□□□□□ -0.36
PCGF1-203ENST00000465993 EIF4G1Q04637 1599 aaKnown RBP12.82□□□□□ -0.36
PCGF1-203ENST00000465993 ZCCHC6Q5VYS8 1495 aaKnown RBP12.76□□□□□ -0.37
PCGF1-203ENST00000465993 SHROOM4Q9ULL8 1493 aa12.76□□□□□ -0.37
PCGF1-203ENST00000465993 HOXD11P31277 338 aaPredicted RBP12.71□□□□□ -0.37
PCGF1-203ENST00000465993 DCAF1Q9Y4B6 1507 aa12.68□□□□□ -0.38
PCGF1-203ENST00000465993 CUX2O14529 1486 aa12.42□□□□□ -0.42
PCGF1-203ENST00000465993 RNF216Q9NWF9 866 aaPredicted RBP12.42□□□□□ -0.42
PCGF1-203ENST00000465993 ERCC6Q03468 1493 aa12.41□□□□□ -0.42
PCGF1-203ENST00000465993 CNKSR2Q8WXI2 1034 aa12.32□□□□□ -0.44
PCGF1-203ENST00000465993 NESP48681 1621 aa12.31□□□□□ -0.44
PCGF1-203ENST00000465993 NCAPD3P42695 1498 aa12.29□□□□□ -0.44
PCGF1-203ENST00000465993 PPP4R3CPQ6ZMV5 832 aa12.27□□□□□ -0.45
PCGF1-203ENST00000465993 TRIM41Q8WV44 630 aa12.26□□□□□ -0.45
PCGF1-203ENST00000465993 ATAD2BQ9ULI0 1458 aa12.25□□□□□ -0.45
PCGF1-203ENST00000465993 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.17□□□□□ -0.46
PCGF1-203ENST00000465993 THOC2Q8NI27 1593 aaKnown RBP12.16□□□□□ -0.46
PCGF1-203ENST00000465993 SMARCA4P51532 1647 aa12.15□□□□□ -0.47
PCGF1-203ENST00000465993 HMGXB3Q12766 1538 aa12.14□□□□□ -0.47
PCGF1-203ENST00000465993 SMARCA2P51531 1590 aa12.13□□□□□ -0.47
PCGF1-203ENST00000465993 BAZ1BQ9UIG0 1483 aaKnown RBP12.1□□□□□ -0.47
PCGF1-203ENST00000465993 KIF21AQ7Z4S6 1674 aa12.07□□□□□ -0.48
PCGF1-203ENST00000465993 LAMC3Q9Y6N6 1575 aa12.03□□□□□ -0.48
PCGF1-203ENST00000465993 PDS5BQ9NTI5 1447 aa12□□□□□ -0.49
PCGF1-203ENST00000465993 BAZ1AQ9NRL2 1556 aaPredicted RBP12□□□□□ -0.49
PCGF1-203ENST00000465993 DSG3P32926 999 aa11.99□□□□□ -0.49
PCGF1-203ENST00000465993 MROH2BQ7Z745 1585 aa11.99□□□□□ -0.49
PCGF1-203ENST00000465993 PEG3Q9GZU2 1588 aa11.96□□□□□ -0.49
PCGF1-203ENST00000465993 MRC2Q9UBG0 1479 aa11.94□□□□□ -0.5
PCGF1-203ENST00000465993 CADPSQ9ULU8 1353 aa11.93□□□□□ -0.5
PCGF1-203ENST00000465993 CAPN15O75808 1086 aa11.92□□□□□ -0.5
PCGF1-203ENST00000465993 WDR62O43379 1518 aa11.9□□□□□ -0.5
PCGF1-203ENST00000465993 OSCARQ8IYS5 282 aa11.87□□□□□ -0.51
PCGF1-203ENST00000465993 WIZO95785 1651 aa11.83□□□□□ -0.52
PCGF1-203ENST00000465993 CEP164Q9UPV0 1460 aa11.83□□□□□ -0.52
PCGF1-203ENST00000465993 FANCD2Q9BXW9 1451 aa11.81□□□□□ -0.52
PCGF1-203ENST00000465993 SPINK5Q9NQ38 1064 aaPredicted RBP11.77□□□□□ -0.53
PCGF1-203ENST00000465993 URB2Q14146 1524 aaKnown RBP11.76□□□□□ -0.53
PCGF1-203ENST00000465993 RIMBP3CA6NJZ7 1639 aa11.75□□□□□ -0.53
PCGF1-203ENST00000465993 RIMBP3BA6NNM3 1639 aa11.75□□□□□ -0.53
PCGF1-203ENST00000465993 RIMBP3Q9UFD9 1639 aa11.75□□□□□ -0.53
PCGF1-203ENST00000465993 CFTRP13569 1480 aa11.72□□□□□ -0.53
PCGF1-203ENST00000465993 U3KPZ7 1027 aaPredicted RBP11.71□□□□□ -0.53
PCGF1-203ENST00000465993 ZNF608Q9ULD9 1512 aaPredicted RBP11.7□□□□□ -0.54
PCGF1-203ENST00000465993 NCBP3Q53F19 620 aaKnown RBP11.69□□□□□ -0.54
PCGF1-203ENST00000465993 CYB5RLQ6IPT4 315 aa11.69□□□□□ -0.54
PCGF1-203ENST00000465993 ARHGEF11O15085 1522 aa11.68□□□□□ -0.54
PCGF1-203ENST00000465993 SP7Q8TDD2 431 aaPredicted RBP11.66□□□□□ -0.54
PCGF1-203ENST00000465993 TRHP20396 242 aaPredicted RBP11.65□□□□□ -0.54
PCGF1-203ENST00000465993 RBM42Q9BTD8 480 aaKnown RBP11.63□□□□□ -0.55
PCGF1-203ENST00000465993 RSF1Q96T23 1441 aaPredicted RBP11.61□□□□□ -0.55
PCGF1-203ENST00000465993 CHRDL2Q6WN34 429 aa11.6□□□□□ -0.55
PCGF1-203ENST00000465993 TOP2AP11388 1531 aaKnown RBP11.6□□□□□ -0.55
PCGF1-203ENST00000465993 IFT140Q96RY7 1462 aa11.59□□□□□ -0.55
PCGF1-203ENST00000465993 ARAP1Q96P48 1450 aa11.57□□□□□ -0.56
PCGF1-203ENST00000465993 APLP2Q06481 763 aa11.57□□□□□ -0.56
PCGF1-203ENST00000465993 FBLN2P98095 1184 aa11.56□□□□□ -0.56
PCGF1-203ENST00000465993 AQRO60306 1485 aaKnown RBP eCLIP11.56□□□□□ -0.561e-6■■■■□ 24.6
PCGF1-203ENST00000465993 TOPBP1Q92547 1522 aa11.55□□□□□ -0.56
PCGF1-203ENST00000465993 EIF4G3O43432 1585 aaKnown RBP11.54□□□□□ -0.56
PCGF1-203ENST00000465993 ZNF219Q9P2Y4 722 aaPredicted RBP11.53□□□□□ -0.56
PCGF1-203ENST00000465993 CHD1O14646 1710 aa11.52□□□□□ -0.56
PCGF1-203ENST00000465993 CCDC88BA6NC98 1476 aa11.52□□□□□ -0.56
PCGF1-203ENST00000465993 PRDM2Q13029 1718 aa11.51□□□□□ -0.57
PCGF1-203ENST00000465993 ABCB7O75027 752 aa11.47□□□□□ -0.57
PCGF1-203ENST00000465993 TARBP1Q13395 1621 aaKnown RBP11.46□□□□□ -0.58
PCGF1-203ENST00000465993 RAD54L2Q9Y4B4 1467 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms