RNA–Protein interactions for RNA: ENST00000465485.1

FRMD3-206, Transcript of FERM domain containing 3, humanhuman

TSL 2

Gene FRMD3, Length 604 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRMD3-206ENST00000465485 AEBP2Q6ZN18 517 aaPredicted RBP23.42■■□□□ 1.34
FRMD3-206ENST00000465485 CHIC1Q5VXU3 224 aa21.91■■□□□ 1.1
FRMD3-206ENST00000465485 NISCHQ9Y2I1 1504 aa20.62■□□□□ 0.89
FRMD3-206ENST00000465485 SENP3Q9H4L4 574 aaPredicted RBP19.94■□□□□ 0.78
FRMD3-206ENST00000465485 PHF23Q9BUL5 403 aaPredicted RBP19.69■□□□□ 0.74
FRMD3-206ENST00000465485 FOXD1Q16676 465 aa18.68■□□□□ 0.58
FRMD3-206ENST00000465485 CCDC180Q9P1Z9 1646 aa18.27■□□□□ 0.51
FRMD3-206ENST00000465485 ABCC9O60706 1549 aa17.85■□□□□ 0.45
FRMD3-206ENST00000465485 POTEDQ86YR6 584 aa17.64■□□□□ 0.41
FRMD3-206ENST00000465485 MSH5O43196 834 aa17.51■□□□□ 0.39
FRMD3-206ENST00000465485 PLPPR3Q6T4P5 718 aa17.36■□□□□ 0.37
FRMD3-206ENST00000465485 PIAS4Q8N2W9 510 aaPredicted RBP17.36■□□□□ 0.37
FRMD3-206ENST00000465485 DCAF8L2P0C7V8 631 aa17.34■□□□□ 0.37
FRMD3-206ENST00000465485 PPP6R1Q9UPN7 881 aa17.29■□□□□ 0.36
FRMD3-206ENST00000465485 NACADO15069 1562 aa17.23■□□□□ 0.35
FRMD3-206ENST00000465485 RB1CC1Q8TDY2 1594 aa17.23■□□□□ 0.35
FRMD3-206ENST00000465485 ADRA2BP18089 450 aa17.21■□□□□ 0.35
FRMD3-206ENST00000465485 ZCCHC6Q5VYS8 1495 aaKnown RBP17.17■□□□□ 0.34
FRMD3-206ENST00000465485 MYO15BQ96JP2 1530 aa17.16■□□□□ 0.34
FRMD3-206ENST00000465485 DCAF1Q9Y4B6 1507 aa17.09■□□□□ 0.33
FRMD3-206ENST00000465485 DNAJC5BQ9UF47 199 aa16.84■□□□□ 0.29
FRMD3-206ENST00000465485 PABPN1Q86U42 306 aaKnown RBP eCLIP16.73■□□□□ 0.27
FRMD3-206ENST00000465485 SCRIBQ14160 1630 aa16.66■□□□□ 0.26
FRMD3-206ENST00000465485 UNC13AQ9UPW8 1703 aa16.61■□□□□ 0.25
FRMD3-206ENST00000465485 SHROOM4Q9ULL8 1493 aa16.6■□□□□ 0.25
FRMD3-206ENST00000465485 BICRAQ9NZM4 1560 aa16.57■□□□□ 0.24
FRMD3-206ENST00000465485 EIF4G1Q04637 1599 aaKnown RBP16.21■□□□□ 0.19
FRMD3-206ENST00000465485 CC2D2AQ9P2K1 1620 aa16.11■□□□□ 0.17
FRMD3-206ENST00000465485 CECR2Q9BXF3 1484 aa16.07■□□□□ 0.16
FRMD3-206ENST00000465485 BAZ1AQ9NRL2 1556 aaPredicted RBP16.01■□□□□ 0.15
FRMD3-206ENST00000465485 DNAJC5Q9H3Z4 198 aa16.01■□□□□ 0.15
FRMD3-206ENST00000465485 SMARCA4P51532 1647 aa15.94■□□□□ 0.14
FRMD3-206ENST00000465485 SMARCA2P51531 1590 aa15.92■□□□□ 0.14
FRMD3-206ENST00000465485 MAPK8IP2Q13387 824 aaPredicted RBP15.91■□□□□ 0.14
FRMD3-206ENST00000465485 NCAPD3P42695 1498 aa15.91■□□□□ 0.14
FRMD3-206ENST00000465485 ATAD2BQ9ULI0 1458 aa15.9■□□□□ 0.14
FRMD3-206ENST00000465485 MROH2BQ7Z745 1585 aa15.84■□□□□ 0.13
FRMD3-206ENST00000465485 BAZ1BQ9UIG0 1483 aaKnown RBP15.81■□□□□ 0.12
FRMD3-206ENST00000465485 PEG3Q9GZU2 1588 aa15.8■□□□□ 0.12
FRMD3-206ENST00000465485 HMGXB3Q12766 1538 aa15.8■□□□□ 0.12
FRMD3-206ENST00000465485 DMRT2Q9Y5R5 561 aa15.78■□□□□ 0.12
FRMD3-206ENST00000465485 RSF1Q96T23 1441 aaPredicted RBP15.75■□□□□ 0.11
FRMD3-206ENST00000465485 SUPT5HO00267 1087 aaKnown RBP15.69■□□□□ 0.1
FRMD3-206ENST00000465485 SCAF1Q9H7N4 1312 aaKnown RBP15.64■□□□□ 0.09
FRMD3-206ENST00000465485 WIZO95785 1651 aa15.63■□□□□ 0.09
FRMD3-206ENST00000465485 TOP2AP11388 1531 aaKnown RBP15.56■□□□□ 0.08
FRMD3-206ENST00000465485 CADPSQ9ULU8 1353 aa15.48■□□□□ 0.07
FRMD3-206ENST00000465485 ERCC6Q03468 1493 aa15.47■□□□□ 0.07
FRMD3-206ENST00000465485 LAMC3Q9Y6N6 1575 aa15.45■□□□□ 0.06
FRMD3-206ENST00000465485 PDS5BQ9NTI5 1447 aa15.44■□□□□ 0.06
FRMD3-206ENST00000465485 NESP48681 1621 aa15.41■□□□□ 0.06
FRMD3-206ENST00000465485 CCDC88BA6NC98 1476 aa15.38■□□□□ 0.05
FRMD3-206ENST00000465485 CFTRP13569 1480 aa15.35■□□□□ 0.05
FRMD3-206ENST00000465485 FANCD2Q9BXW9 1451 aa15.27■□□□□ 0.03
FRMD3-206ENST00000465485 CUX2O14529 1486 aa15.26■□□□□ 0.03
FRMD3-206ENST00000465485 CEP164Q9UPV0 1460 aa15.26■□□□□ 0.03
FRMD3-206ENST00000465485 CACNB1Q02641 598 aaPredicted RBP15.24■□□□□ 0.03
FRMD3-206ENST00000465485 MRC2Q9UBG0 1479 aa15.21■□□□□ 0.03
FRMD3-206ENST00000465485 PPP4R3CPQ6ZMV5 832 aa15.21■□□□□ 0.03
FRMD3-206ENST00000465485 KIF21AQ7Z4S6 1674 aa15.17■□□□□ 0.02
FRMD3-206ENST00000465485 DCAF8L1A6NGE4 600 aa15.17■□□□□ 0.02
FRMD3-206ENST00000465485 THOC2Q8NI27 1593 aaKnown RBP15.14■□□□□ 0.01
FRMD3-206ENST00000465485 ABCC8Q09428 1581 aa15.11■□□□□ 0.01
FRMD3-206ENST00000465485 WDR62O43379 1518 aa15.11■□□□□ 0.01
FRMD3-206ENST00000465485 PRDM2Q13029 1718 aa15.09■□□□□ 0.01
FRMD3-206ENST00000465485 HOXD11P31277 338 aaPredicted RBP15.09■□□□□ 0.01
FRMD3-206ENST00000465485 URB2Q14146 1524 aaKnown RBP15.04■□□□□ -0
FRMD3-206ENST00000465485 TOPBP1Q92547 1522 aa15□□□□□ -0.01
FRMD3-206ENST00000465485 DNMBPQ6XZF7 1577 aa14.98□□□□□ -0.01
FRMD3-206ENST00000465485 TRIM41Q8WV44 630 aa14.98□□□□□ -0.01
FRMD3-206ENST00000465485 CNKSR2Q8WXI2 1034 aa14.96□□□□□ -0.01
FRMD3-206ENST00000465485 RNF39Q9H2S5 420 aa14.96□□□□□ -0.01
FRMD3-206ENST00000465485 IFT140Q96RY7 1462 aa14.95□□□□□ -0.02
FRMD3-206ENST00000465485 RNF216Q9NWF9 866 aaPredicted RBP14.9□□□□□ -0.02
FRMD3-206ENST00000465485 WRNQ14191 1432 aaPredicted RBP eCLIP14.89□□□□□ -0.03
FRMD3-206ENST00000465485 SOGA1O94964 1423 aa14.88□□□□□ -0.03
FRMD3-206ENST00000465485 POLA1P09884 1462 aaPredicted RBP14.87□□□□□ -0.03
FRMD3-206ENST00000465485 CUX1P39880 1505 aa14.87□□□□□ -0.03
FRMD3-206ENST00000465485 FGD5Q6ZNL6 1462 aa14.85□□□□□ -0.03
FRMD3-206ENST00000465485 RAD54L2Q9Y4B4 1467 aa14.79□□□□□ -0.04
FRMD3-206ENST00000465485 ZNF608Q9ULD9 1512 aaPredicted RBP14.78□□□□□ -0.04
FRMD3-206ENST00000465485 TOP2BQ02880 1626 aa14.77□□□□□ -0.04
FRMD3-206ENST00000465485 TDRD9Q8NDG6 1382 aaKnown RBP14.76□□□□□ -0.05
FRMD3-206ENST00000465485 WDR97A6NE52 1622 aa14.76□□□□□ -0.05
FRMD3-206ENST00000465485 TARBP1Q13395 1621 aaKnown RBP14.76□□□□□ -0.05
FRMD3-206ENST00000465485 AQRO60306 1485 aaKnown RBP eCLIP14.75□□□□□ -0.05
FRMD3-206ENST00000465485 BIVM-ERCC5R4GMW8 1640 aa14.74□□□□□ -0.05
FRMD3-206ENST00000465485 SYNJ1O43426 1573 aa14.73□□□□□ -0.05
FRMD3-206ENST00000465485 ABCA10Q8WWZ4 1543 aa14.72□□□□□ -0.05
FRMD3-206ENST00000465485 EEA1Q15075 1411 aa14.72□□□□□ -0.05
FRMD3-206ENST00000465485 OSCARQ8IYS5 282 aa14.71□□□□□ -0.05
FRMD3-206ENST00000465485 EIF4G3O43432 1585 aaKnown RBP14.71□□□□□ -0.05
FRMD3-206ENST00000465485 GRIN2BQ13224 1484 aa14.69□□□□□ -0.06
FRMD3-206ENST00000465485 C1QBPQ07021 282 aaKnown RBP14.69□□□□□ -0.06
FRMD3-206ENST00000465485 GAPVD1Q14C86 1478 aa14.69□□□□□ -0.06
FRMD3-206ENST00000465485 FBLN2P98095 1184 aa14.67□□□□□ -0.06
FRMD3-206ENST00000465485 CHMP7Q8WUX9 453 aaPredicted RBP14.66□□□□□ -0.06
FRMD3-206ENST00000465485 MAGI1Q96QZ7 1491 aaPredicted RBP14.64□□□□□ -0.07
FRMD3-206ENST00000465485 KIF27Q86VH2 1401 aa14.62□□□□□ -0.07
FRMD3-206ENST00000465485 SNAPC4Q5SXM2 1469 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms