RNA–Protein interactions for RNA: ENST00000464481.5

SPIRE1-208, Transcript of spire type actin nucleation factor 1, humanhuman

TSL 5

Gene SPIRE1, Length 1,264 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-208ENST00000464481 AEBP2Q6ZN18 517 aaPredicted RBP22.71■■□□□ 1.23
SPIRE1-208ENST00000464481 CHIC1Q5VXU3 224 aa21.58■■□□□ 1.05
SPIRE1-208ENST00000464481 NISCHQ9Y2I1 1504 aa19.58■□□□□ 0.73
SPIRE1-208ENST00000464481 SENP3Q9H4L4 574 aaPredicted RBP19.25■□□□□ 0.67
SPIRE1-208ENST00000464481 PHF23Q9BUL5 403 aaPredicted RBP19.08■□□□□ 0.64
SPIRE1-208ENST00000464481 FOXD1Q16676 465 aa18.01■□□□□ 0.47
SPIRE1-208ENST00000464481 CCDC180Q9P1Z9 1646 aa17.46■□□□□ 0.39
SPIRE1-208ENST00000464481 PLPPR3Q6T4P5 718 aa17.25■□□□□ 0.35
SPIRE1-208ENST00000464481 PPP6R1Q9UPN7 881 aa16.95■□□□□ 0.3
SPIRE1-208ENST00000464481 ADRA2BP18089 450 aa16.91■□□□□ 0.3
SPIRE1-208ENST00000464481 PIAS4Q8N2W9 510 aaPredicted RBP16.84■□□□□ 0.29
SPIRE1-208ENST00000464481 MSH5O43196 834 aa16.73■□□□□ 0.27
SPIRE1-208ENST00000464481 ABCC9O60706 1549 aa16.72■□□□□ 0.27
SPIRE1-208ENST00000464481 ZCCHC6Q5VYS8 1495 aaKnown RBP16.36■□□□□ 0.21
SPIRE1-208ENST00000464481 DCAF8L2P0C7V8 631 aa16.36■□□□□ 0.21
SPIRE1-208ENST00000464481 RB1CC1Q8TDY2 1594 aa16.3■□□□□ 0.2
SPIRE1-208ENST00000464481 NACADO15069 1562 aa16.27■□□□□ 0.2
SPIRE1-208ENST00000464481 POTEDQ86YR6 584 aa16.27■□□□□ 0.2
SPIRE1-208ENST00000464481 DCAF1Q9Y4B6 1507 aa16.22■□□□□ 0.19
SPIRE1-208ENST00000464481 MYO15BQ96JP2 1530 aa16.18■□□□□ 0.18
SPIRE1-208ENST00000464481 UNC13AQ9UPW8 1703 aa15.97■□□□□ 0.15
SPIRE1-208ENST00000464481 SCRIBQ14160 1630 aa15.93■□□□□ 0.14
SPIRE1-208ENST00000464481 SHROOM4Q9ULL8 1493 aa15.67■□□□□ 0.1
SPIRE1-208ENST00000464481 BICRAQ9NZM4 1560 aa15.62■□□□□ 0.09
SPIRE1-208ENST00000464481 PABPN1Q86U42 306 aaKnown RBP eCLIP15.6■□□□□ 0.09
SPIRE1-208ENST00000464481 MAPK8IP2Q13387 824 aaPredicted RBP15.52■□□□□ 0.08
SPIRE1-208ENST00000464481 DNAJC5BQ9UF47 199 aa15.48■□□□□ 0.07
SPIRE1-208ENST00000464481 SCAF1Q9H7N4 1312 aaKnown RBP15.33■□□□□ 0.04
SPIRE1-208ENST00000464481 DMRT2Q9Y5R5 561 aa15.3■□□□□ 0.04
SPIRE1-208ENST00000464481 EIF4G1Q04637 1599 aaKnown RBP15.28■□□□□ 0.04
SPIRE1-208ENST00000464481 BAZ1AQ9NRL2 1556 aaPredicted RBP15.25■□□□□ 0.03
SPIRE1-208ENST00000464481 SMARCA4P51532 1647 aa15.21■□□□□ 0.03
SPIRE1-208ENST00000464481 PPP4R3CPQ6ZMV5 832 aa15.18■□□□□ 0.02
SPIRE1-208ENST00000464481 CC2D2AQ9P2K1 1620 aa15.17■□□□□ 0.02
SPIRE1-208ENST00000464481 CECR2Q9BXF3 1484 aa15.15■□□□□ 0.02
SPIRE1-208ENST00000464481 SMARCA2P51531 1590 aa15.09■□□□□ 0.01
SPIRE1-208ENST00000464481 MROH2BQ7Z745 1585 aa15.07■□□□□ 0
SPIRE1-208ENST00000464481 WIZO95785 1651 aa15.02□□□□□ -0.01
SPIRE1-208ENST00000464481 PEG3Q9GZU2 1588 aa14.99□□□□□ -0.01
SPIRE1-208ENST00000464481 BAZ1BQ9UIG0 1483 aaKnown RBP14.97□□□□□ -0.01
SPIRE1-208ENST00000464481 ATAD2BQ9ULI0 1458 aa14.96□□□□□ -0.01
SPIRE1-208ENST00000464481 RSF1Q96T23 1441 aaPredicted RBP14.96□□□□□ -0.01
SPIRE1-208ENST00000464481 HMGXB3Q12766 1538 aa14.96□□□□□ -0.02
SPIRE1-208ENST00000464481 NCAPD3P42695 1498 aa14.89□□□□□ -0.03
SPIRE1-208ENST00000464481 SUPT5HO00267 1087 aaKnown RBP14.89□□□□□ -0.03
SPIRE1-208ENST00000464481 TOP2AP11388 1531 aaKnown RBP14.87□□□□□ -0.03
SPIRE1-208ENST00000464481 CNKSR2Q8WXI2 1034 aa14.83□□□□□ -0.04
SPIRE1-208ENST00000464481 HOXD11P31277 338 aaPredicted RBP14.76□□□□□ -0.05
SPIRE1-208ENST00000464481 DCAF8L1A6NGE4 600 aa14.75□□□□□ -0.05
SPIRE1-208ENST00000464481 PRDM2Q13029 1718 aa14.67□□□□□ -0.06
SPIRE1-208ENST00000464481 RNF216Q9NWF9 866 aaPredicted RBP14.66□□□□□ -0.06
SPIRE1-208ENST00000464481 LAMC3Q9Y6N6 1575 aa14.62□□□□□ -0.07
SPIRE1-208ENST00000464481 CCDC88BA6NC98 1476 aa14.61□□□□□ -0.07
SPIRE1-208ENST00000464481 DNAJC5Q9H3Z4 198 aa14.57□□□□□ -0.08
SPIRE1-208ENST00000464481 NCBP3Q53F19 620 aaKnown RBP14.55□□□□□ -0.08
SPIRE1-208ENST00000464481 ERCC6Q03468 1493 aa14.51□□□□□ -0.09
SPIRE1-208ENST00000464481 CADPSQ9ULU8 1353 aa14.51□□□□□ -0.09
SPIRE1-208ENST00000464481 KIF21AQ7Z4S6 1674 aa14.5□□□□□ -0.09
SPIRE1-208ENST00000464481 NESP48681 1621 aa14.5□□□□□ -0.09
SPIRE1-208ENST00000464481 PDS5BQ9NTI5 1447 aa14.48□□□□□ -0.09
SPIRE1-208ENST00000464481 CFTRP13569 1480 aa14.47□□□□□ -0.09
SPIRE1-208ENST00000464481 NPM3O75607 178 aaKnown RBP14.42□□□□□ -0.1
SPIRE1-208ENST00000464481 CEP164Q9UPV0 1460 aa14.42□□□□□ -0.1
SPIRE1-208ENST00000464481 FANCD2Q9BXW9 1451 aa14.4□□□□□ -0.1
SPIRE1-208ENST00000464481 CACNB1Q02641 598 aaPredicted RBP14.38□□□□□ -0.11
SPIRE1-208ENST00000464481 RNF39Q9H2S5 420 aa14.33□□□□□ -0.12
SPIRE1-208ENST00000464481 MRC2Q9UBG0 1479 aa14.3□□□□□ -0.12
SPIRE1-208ENST00000464481 THOC2Q8NI27 1593 aaKnown RBP14.3□□□□□ -0.12
SPIRE1-208ENST00000464481 ABCC8Q09428 1581 aa14.27□□□□□ -0.12
SPIRE1-208ENST00000464481 KCNA4P22459 653 aa14.26□□□□□ -0.13
SPIRE1-208ENST00000464481 DNMBPQ6XZF7 1577 aa14.25□□□□□ -0.13
SPIRE1-208ENST00000464481 WDR62O43379 1518 aa14.22□□□□□ -0.13
SPIRE1-208ENST00000464481 BIVM-ERCC5R4GMW8 1640 aa14.19□□□□□ -0.14
SPIRE1-208ENST00000464481 WRNQ14191 1432 aaPredicted RBP eCLIP14.19□□□□□ -0.14
SPIRE1-208ENST00000464481 URB2Q14146 1524 aaKnown RBP14.19□□□□□ -0.14
SPIRE1-208ENST00000464481 TOPBP1Q92547 1522 aa14.18□□□□□ -0.14
SPIRE1-208ENST00000464481 CUX2O14529 1486 aa14.18□□□□□ -0.14
SPIRE1-208ENST00000464481 TOP2BQ02880 1626 aa14.17□□□□□ -0.14
SPIRE1-208ENST00000464481 CUX1P39880 1505 aa14.15□□□□□ -0.14
SPIRE1-208ENST00000464481 SYNJ1O43426 1573 aa14.14□□□□□ -0.15
SPIRE1-208ENST00000464481 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.1□□□□□ -0.15
SPIRE1-208ENST00000464481 FGD5Q6ZNL6 1462 aa14.09□□□□□ -0.15
SPIRE1-208ENST00000464481 C1QBPQ07021 282 aaKnown RBP14.08□□□□□ -0.16
SPIRE1-208ENST00000464481 POLA1P09884 1462 aaPredicted RBP14.06□□□□□ -0.16
SPIRE1-208ENST00000464481 IFT140Q96RY7 1462 aa14.06□□□□□ -0.16
SPIRE1-208ENST00000464481 TRIM41Q8WV44 630 aa14.06□□□□□ -0.16
SPIRE1-208ENST00000464481 WDR97A6NE52 1622 aa14.03□□□□□ -0.16
SPIRE1-208ENST00000464481 SOGA1O94964 1423 aa14.02□□□□□ -0.16
SPIRE1-208ENST00000464481 TARBP1Q13395 1621 aaKnown RBP14.01□□□□□ -0.17
SPIRE1-208ENST00000464481 PBRM1Q86U86 1689 aa14□□□□□ -0.17
SPIRE1-208ENST00000464481 EIF4G3O43432 1585 aaKnown RBP13.99□□□□□ -0.17
SPIRE1-208ENST00000464481 RAD54L2Q9Y4B4 1467 aa13.98□□□□□ -0.17
SPIRE1-208ENST00000464481 ABCA10Q8WWZ4 1543 aa13.95□□□□□ -0.18
SPIRE1-208ENST00000464481 ABCA5Q8WWZ7 1642 aa13.92□□□□□ -0.18
SPIRE1-208ENST00000464481 GAPVD1Q14C86 1478 aa13.9□□□□□ -0.18
SPIRE1-208ENST00000464481 ZNF608Q9ULD9 1512 aaPredicted RBP13.9□□□□□ -0.19
SPIRE1-208ENST00000464481 KIF27Q86VH2 1401 aa13.9□□□□□ -0.19
SPIRE1-208ENST00000464481 TDRD9Q8NDG6 1382 aaKnown RBP13.87□□□□□ -0.19
SPIRE1-208ENST00000464481 CUL7Q14999 1698 aa13.87□□□□□ -0.19
SPIRE1-208ENST00000464481 AQRO60306 1485 aaKnown RBP eCLIP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms