RNA–Protein interactions for RNA: ENST00000464469.2

ZNF28-205, Transcript of zinc finger protein 28, humanhuman

TSL 1 (best)

Gene ZNF28, Length 394 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF28-205ENST00000464469 NISCHQ9Y2I1 1504 aa13.83□□□□□ -0.2
ZNF28-205ENST00000464469 DNAJC5BQ9UF47 199 aa13.7□□□□□ -0.22
ZNF28-205ENST00000464469 DNAJC5Q9H3Z4 198 aa13.67□□□□□ -0.22
ZNF28-205ENST00000464469 ABCC9O60706 1549 aa13.19□□□□□ -0.3
ZNF28-205ENST00000464469 TRIM41Q8WV44 630 aa12.43□□□□□ -0.42
ZNF28-205ENST00000464469 CCDC180Q9P1Z9 1646 aa12.19□□□□□ -0.46
ZNF28-205ENST00000464469 AEBP2Q6ZN18 517 aaPredicted RBP12.11□□□□□ -0.47
ZNF28-205ENST00000464469 CECR2Q9BXF3 1484 aa12.04□□□□□ -0.48
ZNF28-205ENST00000464469 ILDR1Q86SU0 546 aaPredicted RBP12.01□□□□□ -0.49
ZNF28-205ENST00000464469 CUX2O14529 1486 aa12□□□□□ -0.49
ZNF28-205ENST00000464469 PABPN1Q86U42 306 aaKnown RBP eCLIP11.98□□□□□ -0.49
ZNF28-205ENST00000464469 RB1CC1Q8TDY2 1594 aa11.89□□□□□ -0.51
ZNF28-205ENST00000464469 CC2D2AQ9P2K1 1620 aa11.87□□□□□ -0.51
ZNF28-205ENST00000464469 UNC13AQ9UPW8 1703 aa11.72□□□□□ -0.53
ZNF28-205ENST00000464469 BICRAQ9NZM4 1560 aa11.66□□□□□ -0.54
ZNF28-205ENST00000464469 ZCCHC6Q5VYS8 1495 aaKnown RBP11.6□□□□□ -0.55
ZNF28-205ENST00000464469 ERCC6Q03468 1493 aa11.47□□□□□ -0.57
ZNF28-205ENST00000464469 EIF4G1Q04637 1599 aaKnown RBP11.46□□□□□ -0.57
ZNF28-205ENST00000464469 DCAF1Q9Y4B6 1507 aa11.45□□□□□ -0.58
ZNF28-205ENST00000464469 NACADO15069 1562 aa11.43□□□□□ -0.58
ZNF28-205ENST00000464469 DCAF8L2P0C7V8 631 aa11.39□□□□□ -0.59
ZNF28-205ENST00000464469 MYO15BQ96JP2 1530 aa11.38□□□□□ -0.59
ZNF28-205ENST00000464469 TRHP20396 242 aaPredicted RBP11.32□□□□□ -0.6
ZNF28-205ENST00000464469 SHROOM4Q9ULL8 1493 aa11.3□□□□□ -0.6
ZNF28-205ENST00000464469 LMTK3Q96Q04 1460 aa11.28□□□□□ -0.6
ZNF28-205ENST00000464469 SOCS7O14512 581 aa11.27□□□□□ -0.61
ZNF28-205ENST00000464469 RIMBP3CA6NJZ7 1639 aa11.26□□□□□ -0.61
ZNF28-205ENST00000464469 RIMBP3BA6NNM3 1639 aa11.26□□□□□ -0.61
ZNF28-205ENST00000464469 RIMBP3Q9UFD9 1639 aa11.26□□□□□ -0.61
ZNF28-205ENST00000464469 THOC2Q8NI27 1593 aaKnown RBP11.16□□□□□ -0.62
ZNF28-205ENST00000464469 BAZ1AQ9NRL2 1556 aaPredicted RBP11.16□□□□□ -0.62
ZNF28-205ENST00000464469 SCRIBQ14160 1630 aa11.15□□□□□ -0.62
ZNF28-205ENST00000464469 OSCARQ8IYS5 282 aa11.1□□□□□ -0.63
ZNF28-205ENST00000464469 ILDR2Q71H61 639 aa11.08□□□□□ -0.64
ZNF28-205ENST00000464469 ARHGEF11O15085 1522 aa11.04□□□□□ -0.64
ZNF28-205ENST00000464469 FBXO41Q8TF61 875 aa11.04□□□□□ -0.64
ZNF28-205ENST00000464469 ERCC6L2Q5T890 1561 aa10.96□□□□□ -0.65
ZNF28-205ENST00000464469 CYB5RLQ6IPT4 315 aa10.96□□□□□ -0.65
ZNF28-205ENST00000464469 NESP48681 1621 aa10.91□□□□□ -0.66
ZNF28-205ENST00000464469 SMARCA2P51531 1590 aa10.89□□□□□ -0.67
ZNF28-205ENST00000464469 DISP3Q9P2K9 1392 aa10.85□□□□□ -0.67
ZNF28-205ENST00000464469 ARAP1Q96P48 1450 aa10.83□□□□□ -0.68
ZNF28-205ENST00000464469 KDM4FA0A1W2PPD8 638 aa10.8□□□□□ -0.68
ZNF28-205ENST00000464469 HECW2Q9P2P5 1572 aa10.78□□□□□ -0.68
ZNF28-205ENST00000464469 KIF21AQ7Z4S6 1674 aa10.78□□□□□ -0.68
ZNF28-205ENST00000464469 SMARCA4P51532 1647 aa10.69□□□□□ -0.7
ZNF28-205ENST00000464469 MROH2BQ7Z745 1585 aa10.66□□□□□ -0.7
ZNF28-205ENST00000464469 SPATA31D1Q6ZQQ2 1576 aa10.65□□□□□ -0.71
ZNF28-205ENST00000464469 SUPT5HO00267 1087 aaKnown RBP10.64□□□□□ -0.71
ZNF28-205ENST00000464469 RSF1Q96T23 1441 aaPredicted RBP10.64□□□□□ -0.71
ZNF28-205ENST00000464469 WDR62O43379 1518 aa10.63□□□□□ -0.71
ZNF28-205ENST00000464469 LAMC3Q9Y6N6 1575 aa10.59□□□□□ -0.71
ZNF28-205ENST00000464469 WIZO95785 1651 aa10.59□□□□□ -0.71
ZNF28-205ENST00000464469 SYNJ2O15056 1496 aa10.57□□□□□ -0.72
ZNF28-205ENST00000464469 MRC2Q9UBG0 1479 aa10.57□□□□□ -0.72
ZNF28-205ENST00000464469 NCAPD3P42695 1498 aa10.56□□□□□ -0.72
ZNF28-205ENST00000464469 PEG3Q9GZU2 1588 aa10.56□□□□□ -0.72
ZNF28-205ENST00000464469 PDS5BQ9NTI5 1447 aa10.52□□□□□ -0.73
ZNF28-205ENST00000464469 ATAD2BQ9ULI0 1458 aa10.5□□□□□ -0.73
ZNF28-205ENST00000464469 TOP2AP11388 1531 aaKnown RBP10.49□□□□□ -0.73
ZNF28-205ENST00000464469 BAZ1BQ9UIG0 1483 aaKnown RBP10.47□□□□□ -0.73
ZNF28-205ENST00000464469 HMGXB3Q12766 1538 aa10.46□□□□□ -0.74
ZNF28-205ENST00000464469 ADGRL1O94910 1474 aa10.41□□□□□ -0.74
ZNF28-205ENST00000464469 KIF13AQ9H1H9 1805 aa10.39□□□□□ -0.75
ZNF28-205ENST00000464469 CHD1O14646 1710 aa10.36□□□□□ -0.75
ZNF28-205ENST00000464469 CCDC88BA6NC98 1476 aa10.34□□□□□ -0.75
ZNF28-205ENST00000464469 KDM6BO15054 1643 aa10.3□□□□□ -0.76
ZNF28-205ENST00000464469 PRDM2Q13029 1718 aa10.22□□□□□ -0.77
ZNF28-205ENST00000464469 CEP164Q9UPV0 1460 aa10.22□□□□□ -0.77
ZNF28-205ENST00000464469 ZNF608Q9ULD9 1512 aaPredicted RBP10.22□□□□□ -0.77
ZNF28-205ENST00000464469 CLASP1Q7Z460 1538 aa10.17□□□□□ -0.78
ZNF28-205ENST00000464469 CERKQ8TCT0 537 aa10.17□□□□□ -0.78
ZNF28-205ENST00000464469 CFTRP13569 1480 aa10.17□□□□□ -0.78
ZNF28-205ENST00000464469 GAPVD1Q14C86 1478 aa10.16□□□□□ -0.78
ZNF28-205ENST00000464469 CADPSQ9ULU8 1353 aa10.14□□□□□ -0.79
ZNF28-205ENST00000464469 EIF4G3O43432 1585 aaKnown RBP10.14□□□□□ -0.79
ZNF28-205ENST00000464469 CHIC1Q5VXU3 224 aa10.1□□□□□ -0.79
ZNF28-205ENST00000464469 URB2Q14146 1524 aaKnown RBP10.1□□□□□ -0.79
ZNF28-205ENST00000464469 ABCC8Q09428 1581 aa10.09□□□□□ -0.79
ZNF28-205ENST00000464469 FBLN2P98095 1184 aa10.07□□□□□ -0.8
ZNF28-205ENST00000464469 FANCD2Q9BXW9 1451 aa10.06□□□□□ -0.8
ZNF28-205ENST00000464469 IFT140Q96RY7 1462 aa10.05□□□□□ -0.8
ZNF28-205ENST00000464469 WRNQ14191 1432 aaPredicted RBP eCLIP10.05□□□□□ -0.8
ZNF28-205ENST00000464469 ABCC10Q5T3U5 1492 aa10.03□□□□□ -0.8
ZNF28-205ENST00000464469 SYNJ1O43426 1573 aa10.02□□□□□ -0.81
ZNF28-205ENST00000464469 FAM69CQ0P6D2 419 aa10.02□□□□□ -0.81
ZNF28-205ENST00000464469 TOP2BQ02880 1626 aa10.02□□□□□ -0.81
ZNF28-205ENST00000464469 BIVM-ERCC5R4GMW8 1640 aa10.02□□□□□ -0.81
ZNF28-205ENST00000464469 TSPOAP1O95153 1857 aa10.01□□□□□ -0.81
ZNF28-205ENST00000464469 DIP2BQ9P265 1576 aa10.01□□□□□ -0.81
ZNF28-205ENST00000464469 SRCAPQ6ZRS2 3230 aa9.99□□□□□ -0.81
ZNF28-205ENST00000464469 CUX1P39880 1505 aa9.98□□□□□ -0.81
ZNF28-205ENST00000464469 DNMBPQ6XZF7 1577 aa9.97□□□□□ -0.81
ZNF28-205ENST00000464469 PCF11O94913 1555 aaKnown RBP9.96□□□□□ -0.82
ZNF28-205ENST00000464469 IFFO2Q5TF58 517 aa9.95□□□□□ -0.82
ZNF28-205ENST00000464469 TOPBP1Q92547 1522 aa9.94□□□□□ -0.82
ZNF28-205ENST00000464469 MED1Q15648 1581 aaPredicted RBP9.92□□□□□ -0.82
ZNF28-205ENST00000464469 SNAPC4Q5SXM2 1469 aa9.92□□□□□ -0.82
ZNF28-205ENST00000464469 FGD5Q6ZNL6 1462 aa9.91□□□□□ -0.82
ZNF28-205ENST00000464469 AQRO60306 1485 aaKnown RBP eCLIP9.9□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms