RNA–Protein interactions for RNA: ENST00000463984.1

TRANK1-203, Transcript of tetratricopeptide repeat and ankyrin repeat containing 1, humanhuman

TSL 4

Gene TRANK1, Length 833 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRANK1-203ENST00000463984 AEBP2Q6ZN18 517 aaPredicted RBP23.02■■□□□ 1.28
TRANK1-203ENST00000463984 CHIC1Q5VXU3 224 aa22.02■■□□□ 1.12
TRANK1-203ENST00000463984 NISCHQ9Y2I1 1504 aa19.72■□□□□ 0.75
TRANK1-203ENST00000463984 SENP3Q9H4L4 574 aaPredicted RBP19.49■□□□□ 0.71
TRANK1-203ENST00000463984 PHF23Q9BUL5 403 aaPredicted RBP19.39■□□□□ 0.69
TRANK1-203ENST00000463984 FOXD1Q16676 465 aa18.22■□□□□ 0.51
TRANK1-203ENST00000463984 PLPPR3Q6T4P5 718 aa17.67■□□□□ 0.42
TRANK1-203ENST00000463984 CCDC180Q9P1Z9 1646 aa17.45■□□□□ 0.38
TRANK1-203ENST00000463984 PPP6R1Q9UPN7 881 aa17.25■□□□□ 0.35
TRANK1-203ENST00000463984 ADRA2BP18089 450 aa17.18■□□□□ 0.34
TRANK1-203ENST00000463984 PIAS4Q8N2W9 510 aaPredicted RBP17.03■□□□□ 0.32
TRANK1-203ENST00000463984 ABCC9O60706 1549 aa16.96■□□□□ 0.3
TRANK1-203ENST00000463984 MSH5O43196 834 aa16.9■□□□□ 0.3
TRANK1-203ENST00000463984 ZCCHC6Q5VYS8 1495 aaKnown RBP16.48■□□□□ 0.23
TRANK1-203ENST00000463984 MYO15BQ96JP2 1530 aa16.38■□□□□ 0.21
TRANK1-203ENST00000463984 NACADO15069 1562 aa16.38■□□□□ 0.21
TRANK1-203ENST00000463984 DCAF1Q9Y4B6 1507 aa16.35■□□□□ 0.21
TRANK1-203ENST00000463984 RB1CC1Q8TDY2 1594 aa16.33■□□□□ 0.2
TRANK1-203ENST00000463984 DCAF8L2P0C7V8 631 aa16.25■□□□□ 0.19
TRANK1-203ENST00000463984 POTEDQ86YR6 584 aa16.19■□□□□ 0.18
TRANK1-203ENST00000463984 UNC13AQ9UPW8 1703 aa16.03■□□□□ 0.16
TRANK1-203ENST00000463984 BICRAQ9NZM4 1560 aa15.97■□□□□ 0.15
TRANK1-203ENST00000463984 SCRIBQ14160 1630 aa15.91■□□□□ 0.14
TRANK1-203ENST00000463984 PABPN1Q86U42 306 aaKnown RBP eCLIP15.86■□□□□ 0.13
TRANK1-203ENST00000463984 MAPK8IP2Q13387 824 aaPredicted RBP15.74■□□□□ 0.11
TRANK1-203ENST00000463984 SHROOM4Q9ULL8 1493 aa15.72■□□□□ 0.11
TRANK1-203ENST00000463984 SCAF1Q9H7N4 1312 aaKnown RBP15.62■□□□□ 0.09
TRANK1-203ENST00000463984 DNAJC5BQ9UF47 199 aa15.58■□□□□ 0.08
TRANK1-203ENST00000463984 PPP4R3CPQ6ZMV5 832 aa15.55■□□□□ 0.08
TRANK1-203ENST00000463984 DMRT2Q9Y5R5 561 aa15.53■□□□□ 0.08
TRANK1-203ENST00000463984 EIF4G1Q04637 1599 aaKnown RBP15.46■□□□□ 0.07
TRANK1-203ENST00000463984 CECR2Q9BXF3 1484 aa15.4■□□□□ 0.06
TRANK1-203ENST00000463984 CC2D2AQ9P2K1 1620 aa15.36■□□□□ 0.05
TRANK1-203ENST00000463984 SMARCA4P51532 1647 aa15.27■□□□□ 0.03
TRANK1-203ENST00000463984 MROH2BQ7Z745 1585 aa15.23■□□□□ 0.03
TRANK1-203ENST00000463984 BAZ1AQ9NRL2 1556 aaPredicted RBP15.23■□□□□ 0.03
TRANK1-203ENST00000463984 CNKSR2Q8WXI2 1034 aa15.18■□□□□ 0.02
TRANK1-203ENST00000463984 ATAD2BQ9ULI0 1458 aa15.18■□□□□ 0.02
TRANK1-203ENST00000463984 PEG3Q9GZU2 1588 aa15.16■□□□□ 0.02
TRANK1-203ENST00000463984 NCAPD3P42695 1498 aa15.16■□□□□ 0.02
TRANK1-203ENST00000463984 SMARCA2P51531 1590 aa15.1■□□□□ 0.01
TRANK1-203ENST00000463984 RSF1Q96T23 1441 aaPredicted RBP15.09■□□□□ 0.01
TRANK1-203ENST00000463984 HMGXB3Q12766 1538 aa15.07■□□□□ 0
TRANK1-203ENST00000463984 HOXD11P31277 338 aaPredicted RBP15.05■□□□□ -0
TRANK1-203ENST00000463984 WIZO95785 1651 aa15.03■□□□□ -0
TRANK1-203ENST00000463984 RNF216Q9NWF9 866 aaPredicted RBP14.99□□□□□ -0.01
TRANK1-203ENST00000463984 BAZ1BQ9UIG0 1483 aaKnown RBP14.98□□□□□ -0.01
TRANK1-203ENST00000463984 NCBP3Q53F19 620 aaKnown RBP14.96□□□□□ -0.01
TRANK1-203ENST00000463984 TOP2AP11388 1531 aaKnown RBP14.87□□□□□ -0.03
TRANK1-203ENST00000463984 DCAF8L1A6NGE4 600 aa14.86□□□□□ -0.03
TRANK1-203ENST00000463984 NPM3O75607 178 aaKnown RBP14.82□□□□□ -0.04
TRANK1-203ENST00000463984 KCNA4P22459 653 aa14.76□□□□□ -0.05
TRANK1-203ENST00000463984 NESP48681 1621 aa14.76□□□□□ -0.05
TRANK1-203ENST00000463984 CCDC88BA6NC98 1476 aa14.72□□□□□ -0.05
TRANK1-203ENST00000463984 CADPSQ9ULU8 1353 aa14.69□□□□□ -0.06
TRANK1-203ENST00000463984 LAMC3Q9Y6N6 1575 aa14.68□□□□□ -0.06
TRANK1-203ENST00000463984 CFTRP13569 1480 aa14.65□□□□□ -0.06
TRANK1-203ENST00000463984 SUPT5HO00267 1087 aaKnown RBP14.64□□□□□ -0.07
TRANK1-203ENST00000463984 PDS5BQ9NTI5 1447 aa14.54□□□□□ -0.08
TRANK1-203ENST00000463984 KIF21AQ7Z4S6 1674 aa14.54□□□□□ -0.08
TRANK1-203ENST00000463984 PRDM2Q13029 1718 aa14.52□□□□□ -0.08
TRANK1-203ENST00000463984 THOC2Q8NI27 1593 aaKnown RBP14.51□□□□□ -0.09
TRANK1-203ENST00000463984 ERCC6Q03468 1493 aa14.51□□□□□ -0.09
TRANK1-203ENST00000463984 FANCD2Q9BXW9 1451 aa14.5□□□□□ -0.09
TRANK1-203ENST00000463984 RNF39Q9H2S5 420 aa14.47□□□□□ -0.09
TRANK1-203ENST00000463984 CEP164Q9UPV0 1460 aa14.44□□□□□ -0.1
TRANK1-203ENST00000463984 MRC2Q9UBG0 1479 aa14.43□□□□□ -0.1
TRANK1-203ENST00000463984 WDR62O43379 1518 aa14.41□□□□□ -0.1
TRANK1-203ENST00000463984 URB2Q14146 1524 aaKnown RBP14.41□□□□□ -0.1
TRANK1-203ENST00000463984 CUX2O14529 1486 aa14.4□□□□□ -0.1
TRANK1-203ENST00000463984 CACNB1Q02641 598 aaPredicted RBP14.38□□□□□ -0.11
TRANK1-203ENST00000463984 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.32□□□□□ -0.12
TRANK1-203ENST00000463984 TOPBP1Q92547 1522 aa14.31□□□□□ -0.12
TRANK1-203ENST00000463984 DNMBPQ6XZF7 1577 aa14.28□□□□□ -0.12
TRANK1-203ENST00000463984 CUX1P39880 1505 aa14.27□□□□□ -0.12
TRANK1-203ENST00000463984 C1QBPQ07021 282 aaKnown RBP14.24□□□□□ -0.13
TRANK1-203ENST00000463984 ABCC8Q09428 1581 aa14.24□□□□□ -0.13
TRANK1-203ENST00000463984 POLA1P09884 1462 aaPredicted RBP14.19□□□□□ -0.14
TRANK1-203ENST00000463984 TARBP1Q13395 1621 aaKnown RBP14.18□□□□□ -0.14
TRANK1-203ENST00000463984 SYNJ1O43426 1573 aa14.17□□□□□ -0.14
TRANK1-203ENST00000463984 FGD5Q6ZNL6 1462 aa14.16□□□□□ -0.14
TRANK1-203ENST00000463984 WRNQ14191 1432 aaPredicted RBP eCLIP14.15□□□□□ -0.14
TRANK1-203ENST00000463984 IFT140Q96RY7 1462 aa14.15□□□□□ -0.14
TRANK1-203ENST00000463984 BIVM-ERCC5R4GMW8 1640 aa14.15□□□□□ -0.14
TRANK1-203ENST00000463984 TOP2BQ02880 1626 aa14.14□□□□□ -0.15
TRANK1-203ENST00000463984 ZNF608Q9ULD9 1512 aaPredicted RBP14.14□□□□□ -0.15
TRANK1-203ENST00000463984 RAD54L2Q9Y4B4 1467 aa14.13□□□□□ -0.15
TRANK1-203ENST00000463984 SLC4A2P04920 1241 aa14.12□□□□□ -0.15
TRANK1-203ENST00000463984 SOGA1O94964 1423 aa14.09□□□□□ -0.15
TRANK1-203ENST00000463984 U3KPZ7 1027 aaPredicted RBP14.09□□□□□ -0.15
TRANK1-203ENST00000463984 WDR97A6NE52 1622 aa14.08□□□□□ -0.16
TRANK1-203ENST00000463984 AQRO60306 1485 aaKnown RBP eCLIP14.05□□□□□ -0.16
TRANK1-203ENST00000463984 ABCA10Q8WWZ4 1543 aa14.05□□□□□ -0.16
TRANK1-203ENST00000463984 EIF4G3O43432 1585 aaKnown RBP14.05□□□□□ -0.16
TRANK1-203ENST00000463984 TDRD9Q8NDG6 1382 aaKnown RBP14.02□□□□□ -0.17
TRANK1-203ENST00000463984 ABCA5Q8WWZ7 1642 aa14□□□□□ -0.17
TRANK1-203ENST00000463984 GAPVD1Q14C86 1478 aa13.93□□□□□ -0.18
TRANK1-203ENST00000463984 SLC4A1APQ9BWU0 796 aaKnown RBP13.93□□□□□ -0.18
TRANK1-203ENST00000463984 GRIN2BQ13224 1484 aa13.92□□□□□ -0.18
TRANK1-203ENST00000463984 SNAPC4Q5SXM2 1469 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms