RNA–Protein interactions for RNA: ENST00000460870.1

PLXNA2-202, Transcript of plexin A2, humanhuman

TSL 1 (best)

Gene PLXNA2, Length 756 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNA2-202ENST00000460870 AEBP2Q6ZN18 517 aaPredicted RBP30.97■■■□□ 2.55
PLXNA2-202ENST00000460870 CHIC1Q5VXU3 224 aa29.94■■■□□ 2.38
PLXNA2-202ENST00000460870 NISCHQ9Y2I1 1504 aa28.36■■■□□ 2.13
PLXNA2-202ENST00000460870 SENP3Q9H4L4 574 aaPredicted RBP26.5■■□□□ 1.83
PLXNA2-202ENST00000460870 PHF23Q9BUL5 403 aaPredicted RBP26.21■■□□□ 1.79
PLXNA2-202ENST00000460870 CCDC180Q9P1Z9 1646 aa25.45■■□□□ 1.66
PLXNA2-202ENST00000460870 ABCC9O60706 1549 aa25.09■■□□□ 1.61
PLXNA2-202ENST00000460870 FOXD1Q16676 465 aa24.54■■□□□ 1.52
PLXNA2-202ENST00000460870 PLPPR3Q6T4P5 718 aa24.22■■□□□ 1.47
PLXNA2-202ENST00000460870 RB1CC1Q8TDY2 1594 aa24.1■■□□□ 1.45
PLXNA2-202ENST00000460870 NACADO15069 1562 aa23.99■■□□□ 1.43
PLXNA2-202ENST00000460870 DCAF8L2P0C7V8 631 aa23.78■■□□□ 1.4
PLXNA2-202ENST00000460870 MYO15BQ96JP2 1530 aa23.78■■□□□ 1.4
PLXNA2-202ENST00000460870 ZCCHC6Q5VYS8 1495 aaKnown RBP23.55■■□□□ 1.36
PLXNA2-202ENST00000460870 DCAF1Q9Y4B6 1507 aa23.52■■□□□ 1.36
PLXNA2-202ENST00000460870 UNC13AQ9UPW8 1703 aa23.48■■□□□ 1.35
PLXNA2-202ENST00000460870 PABPN1Q86U42 306 aaKnown RBP eCLIP23.35■■□□□ 1.33
PLXNA2-202ENST00000460870 BICRAQ9NZM4 1560 aa23.29■■□□□ 1.32
PLXNA2-202ENST00000460870 DNAJC5BQ9UF47 199 aa23.28■■□□□ 1.32
PLXNA2-202ENST00000460870 ADRA2BP18089 450 aa23.27■■□□□ 1.32
PLXNA2-202ENST00000460870 PPP6R1Q9UPN7 881 aa23.25■■□□□ 1.31
PLXNA2-202ENST00000460870 SHROOM4Q9ULL8 1493 aa23.18■■□□□ 1.3
PLXNA2-202ENST00000460870 PIAS4Q8N2W9 510 aaPredicted RBP23.16■■□□□ 1.3
PLXNA2-202ENST00000460870 SCRIBQ14160 1630 aa23.07■■□□□ 1.28
PLXNA2-202ENST00000460870 MSH5O43196 834 aa22.91■■□□□ 1.26
PLXNA2-202ENST00000460870 EIF4G1Q04637 1599 aaKnown RBP22.74■■□□□ 1.23
PLXNA2-202ENST00000460870 CC2D2AQ9P2K1 1620 aa22.72■■□□□ 1.23
PLXNA2-202ENST00000460870 CECR2Q9BXF3 1484 aa22.64■■□□□ 1.21
PLXNA2-202ENST00000460870 NCAPD3P42695 1498 aa22.11■■□□□ 1.13
PLXNA2-202ENST00000460870 SMARCA4P51532 1647 aa22.08■■□□□ 1.13
PLXNA2-202ENST00000460870 SMARCA2P51531 1590 aa22.06■■□□□ 1.12
PLXNA2-202ENST00000460870 BAZ1AQ9NRL2 1556 aaPredicted RBP22.05■■□□□ 1.12
PLXNA2-202ENST00000460870 ATAD2BQ9ULI0 1458 aa22.03■■□□□ 1.12
PLXNA2-202ENST00000460870 HMGXB3Q12766 1538 aa22■■□□□ 1.11
PLXNA2-202ENST00000460870 PEG3Q9GZU2 1588 aa21.91■■□□□ 1.1
PLXNA2-202ENST00000460870 BAZ1BQ9UIG0 1483 aaKnown RBP21.86■■□□□ 1.09
PLXNA2-202ENST00000460870 MROH2BQ7Z745 1585 aa21.8■■□□□ 1.08
PLXNA2-202ENST00000460870 ERCC6Q03468 1493 aa21.72■■□□□ 1.07
PLXNA2-202ENST00000460870 CUX2O14529 1486 aa21.66■■□□□ 1.06
PLXNA2-202ENST00000460870 LAMC3Q9Y6N6 1575 aa21.61■■□□□ 1.05
PLXNA2-202ENST00000460870 NESP48681 1621 aa21.59■■□□□ 1.05
PLXNA2-202ENST00000460870 WIZO95785 1651 aa21.56■■□□□ 1.04
PLXNA2-202ENST00000460870 PDS5BQ9NTI5 1447 aa21.48■■□□□ 1.03
PLXNA2-202ENST00000460870 POTEDQ86YR6 584 aa21.46■■□□□ 1.03
PLXNA2-202ENST00000460870 SCAF1Q9H7N4 1312 aaKnown RBP21.44■■□□□ 1.02
PLXNA2-202ENST00000460870 CADPSQ9ULU8 1353 aa21.44■■□□□ 1.02
PLXNA2-202ENST00000460870 RSF1Q96T23 1441 aaPredicted RBP21.44■■□□□ 1.02
PLXNA2-202ENST00000460870 THOC2Q8NI27 1593 aaKnown RBP21.4■■□□□ 1.02
PLXNA2-202ENST00000460870 KIF21AQ7Z4S6 1674 aa21.37■■□□□ 1.01
PLXNA2-202ENST00000460870 TOP2AP11388 1531 aaKnown RBP21.36■■□□□ 1.01
PLXNA2-202ENST00000460870 DNAJC5Q9H3Z4 198 aa21.35■■□□□ 1.01
PLXNA2-202ENST00000460870 PPP4R3CPQ6ZMV5 832 aa21.25■□□□□ 0.99
PLXNA2-202ENST00000460870 CFTRP13569 1480 aa21.24■□□□□ 0.99
PLXNA2-202ENST00000460870 MRC2Q9UBG0 1479 aa21.24■□□□□ 0.99
PLXNA2-202ENST00000460870 CEP164Q9UPV0 1460 aa21.21■□□□□ 0.99
PLXNA2-202ENST00000460870 MAPK8IP2Q13387 824 aaPredicted RBP21.21■□□□□ 0.99
PLXNA2-202ENST00000460870 WDR62O43379 1518 aa21.19■□□□□ 0.98
PLXNA2-202ENST00000460870 FANCD2Q9BXW9 1451 aa21.18■□□□□ 0.98
PLXNA2-202ENST00000460870 PRDM2Q13029 1718 aa21.1■□□□□ 0.97
PLXNA2-202ENST00000460870 CCDC88BA6NC98 1476 aa21.07■□□□□ 0.96
PLXNA2-202ENST00000460870 DMRT2Q9Y5R5 561 aa21.03■□□□□ 0.96
PLXNA2-202ENST00000460870 URB2Q14146 1524 aaKnown RBP20.95■□□□□ 0.94
PLXNA2-202ENST00000460870 ABCC8Q09428 1581 aa20.88■□□□□ 0.93
PLXNA2-202ENST00000460870 TOPBP1Q92547 1522 aa20.79■□□□□ 0.92
PLXNA2-202ENST00000460870 IFT140Q96RY7 1462 aa20.79■□□□□ 0.92
PLXNA2-202ENST00000460870 DNMBPQ6XZF7 1577 aa20.77■□□□□ 0.92
PLXNA2-202ENST00000460870 CNKSR2Q8WXI2 1034 aa20.76■□□□□ 0.91
PLXNA2-202ENST00000460870 NCBP3Q53F19 620 aaKnown RBP20.68■□□□□ 0.9
PLXNA2-202ENST00000460870 OSCARQ8IYS5 282 aa20.68■□□□□ 0.9
PLXNA2-202ENST00000460870 ZNF608Q9ULD9 1512 aaPredicted RBP20.63■□□□□ 0.89
PLXNA2-202ENST00000460870 SUPT5HO00267 1087 aaKnown RBP20.6■□□□□ 0.89
PLXNA2-202ENST00000460870 TARBP1Q13395 1621 aaKnown RBP20.6■□□□□ 0.89
PLXNA2-202ENST00000460870 EIF4G3O43432 1585 aaKnown RBP20.59■□□□□ 0.89
PLXNA2-202ENST00000460870 POLA1P09884 1462 aaPredicted RBP20.59■□□□□ 0.89
PLXNA2-202ENST00000460870 WDR97A6NE52 1622 aa20.53■□□□□ 0.88
PLXNA2-202ENST00000460870 SOGA1O94964 1423 aa20.52■□□□□ 0.87
PLXNA2-202ENST00000460870 AQRO60306 1485 aaKnown RBP eCLIP20.49■□□□□ 0.87
PLXNA2-202ENST00000460870 FGD5Q6ZNL6 1462 aa20.49■□□□□ 0.87
PLXNA2-202ENST00000460870 CUX1P39880 1505 aa20.48■□□□□ 0.87
PLXNA2-202ENST00000460870 RAD54L2Q9Y4B4 1467 aa20.46■□□□□ 0.87
PLXNA2-202ENST00000460870 RNF216Q9NWF9 866 aaPredicted RBP20.44■□□□□ 0.86
PLXNA2-202ENST00000460870 TRIM41Q8WV44 630 aa20.43■□□□□ 0.86
PLXNA2-202ENST00000460870 HOXD11P31277 338 aaPredicted RBP20.41■□□□□ 0.86
PLXNA2-202ENST00000460870 CHD1O14646 1710 aa20.4■□□□□ 0.86
PLXNA2-202ENST00000460870 TDRD9Q8NDG6 1382 aaKnown RBP20.4■□□□□ 0.86
PLXNA2-202ENST00000460870 MAGI1Q96QZ7 1491 aaPredicted RBP20.35■□□□□ 0.85
PLXNA2-202ENST00000460870 RIMBP3CA6NJZ7 1639 aa20.35■□□□□ 0.85
PLXNA2-202ENST00000460870 RIMBP3BA6NNM3 1639 aa20.35■□□□□ 0.85
PLXNA2-202ENST00000460870 RIMBP3Q9UFD9 1639 aa20.35■□□□□ 0.85
PLXNA2-202ENST00000460870 GRIN2BQ13224 1484 aa20.34■□□□□ 0.85
PLXNA2-202ENST00000460870 FBLN2P98095 1184 aa20.33■□□□□ 0.85
PLXNA2-202ENST00000460870 SNAPC4Q5SXM2 1469 aa20.31■□□□□ 0.84
PLXNA2-202ENST00000460870 ARHGEF11O15085 1522 aa20.31■□□□□ 0.84
PLXNA2-202ENST00000460870 ABCA10Q8WWZ4 1543 aa20.31■□□□□ 0.84
PLXNA2-202ENST00000460870 DCAF8L1A6NGE4 600 aa20.3■□□□□ 0.84
PLXNA2-202ENST00000460870 GAPVD1Q14C86 1478 aa20.28■□□□□ 0.84
PLXNA2-202ENST00000460870 WRNQ14191 1432 aaPredicted RBP eCLIP20.27■□□□□ 0.84
PLXNA2-202ENST00000460870 BIVM-ERCC5R4GMW8 1640 aa20.27■□□□□ 0.84
PLXNA2-202ENST00000460870 KCNA4P22459 653 aa20.27■□□□□ 0.84
PLXNA2-202ENST00000460870 TOP2BQ02880 1626 aa20.27■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms