RNA–Protein interactions for RNA: ENST00000459645.1

RGPD6-206, Transcript of RANBP2-like and GRIP domain containing 6, humanhuman

TSL 3

Gene RGPD6, Length 477 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD6-206ENST00000459645 NISCHQ9Y2I1 1504 aa10.58□□□□□ -0.72
RGPD6-206ENST00000459645 ABCC9O60706 1549 aa10.38□□□□□ -0.75
RGPD6-206ENST00000459645 DNAJC5BQ9UF47 199 aa10.35□□□□□ -0.75
RGPD6-206ENST00000459645 DNAJC5Q9H3Z4 198 aa9.87□□□□□ -0.83
RGPD6-206ENST00000459645 CCDC180Q9P1Z9 1646 aa9.64□□□□□ -0.87
RGPD6-206ENST00000459645 PABPN1Q86U42 306 aaKnown RBP eCLIP9.62□□□□□ -0.87
RGPD6-206ENST00000459645 RB1CC1Q8TDY2 1594 aa9.51□□□□□ -0.89
RGPD6-206ENST00000459645 CECR2Q9BXF3 1484 aa9.39□□□□□ -0.91
RGPD6-206ENST00000459645 BICRAQ9NZM4 1560 aa9.32□□□□□ -0.92
RGPD6-206ENST00000459645 NACADO15069 1562 aa9.3□□□□□ -0.92
RGPD6-206ENST00000459645 CC2D2AQ9P2K1 1620 aa9.28□□□□□ -0.92
RGPD6-206ENST00000459645 DCAF8L2P0C7V8 631 aa9.26□□□□□ -0.93
RGPD6-206ENST00000459645 UNC13AQ9UPW8 1703 aa9.23□□□□□ -0.93
RGPD6-206ENST00000459645 TRIM41Q8WV44 630 aa9.21□□□□□ -0.94
RGPD6-206ENST00000459645 CUX2O14529 1486 aa9.12□□□□□ -0.95
RGPD6-206ENST00000459645 EIF4G1Q04637 1599 aaKnown RBP9.12□□□□□ -0.95
RGPD6-206ENST00000459645 SHROOM4Q9ULL8 1493 aa9.05□□□□□ -0.96
RGPD6-206ENST00000459645 MYO15BQ96JP2 1530 aa8.98□□□□□ -0.97
RGPD6-206ENST00000459645 ERCC6Q03468 1493 aa8.96□□□□□ -0.98
RGPD6-206ENST00000459645 SCRIBQ14160 1630 aa8.87□□□□□ -0.99
RGPD6-206ENST00000459645 AEBP2Q6ZN18 517 aaPredicted RBP8.76□□□□□ -1.01
RGPD6-206ENST00000459645 NESP48681 1621 aa8.76□□□□□ -1.01
RGPD6-206ENST00000459645 THOC2Q8NI27 1593 aaKnown RBP8.7□□□□□ -1.02
RGPD6-206ENST00000459645 DCAF1Q9Y4B6 1507 aa8.65□□□□□ -1.02
RGPD6-206ENST00000459645 NCAPD3P42695 1498 aa8.65□□□□□ -1.02
RGPD6-206ENST00000459645 OSCARQ8IYS5 282 aa8.65□□□□□ -1.02
RGPD6-206ENST00000459645 ZCCHC6Q5VYS8 1495 aaKnown RBP8.64□□□□□ -1.03
RGPD6-206ENST00000459645 SMARCA2P51531 1590 aa8.63□□□□□ -1.03
RGPD6-206ENST00000459645 TRHP20396 242 aaPredicted RBP8.6□□□□□ -1.03
RGPD6-206ENST00000459645 BAZ1AQ9NRL2 1556 aaPredicted RBP8.57□□□□□ -1.04
RGPD6-206ENST00000459645 RIMBP3CA6NJZ7 1639 aa8.56□□□□□ -1.04
RGPD6-206ENST00000459645 RIMBP3BA6NNM3 1639 aa8.56□□□□□ -1.04
RGPD6-206ENST00000459645 RIMBP3Q9UFD9 1639 aa8.56□□□□□ -1.04
RGPD6-206ENST00000459645 ILDR1Q86SU0 546 aaPredicted RBP8.56□□□□□ -1.04
RGPD6-206ENST00000459645 ATAD2BQ9ULI0 1458 aa8.56□□□□□ -1.04
RGPD6-206ENST00000459645 CYB5RLQ6IPT4 315 aa8.52□□□□□ -1.05
RGPD6-206ENST00000459645 PDS5BQ9NTI5 1447 aa8.51□□□□□ -1.05
RGPD6-206ENST00000459645 KIF21AQ7Z4S6 1674 aa8.5□□□□□ -1.05
RGPD6-206ENST00000459645 ARHGEF11O15085 1522 aa8.49□□□□□ -1.05
RGPD6-206ENST00000459645 HMGXB3Q12766 1538 aa8.49□□□□□ -1.05
RGPD6-206ENST00000459645 LAMC3Q9Y6N6 1575 aa8.48□□□□□ -1.05
RGPD6-206ENST00000459645 MRC2Q9UBG0 1479 aa8.48□□□□□ -1.05
RGPD6-206ENST00000459645 WDR62O43379 1518 aa8.46□□□□□ -1.05
RGPD6-206ENST00000459645 BAZ1BQ9UIG0 1483 aaKnown RBP8.42□□□□□ -1.06
RGPD6-206ENST00000459645 ARAP1Q96P48 1450 aa8.4□□□□□ -1.06
RGPD6-206ENST00000459645 CADPSQ9ULU8 1353 aa8.38□□□□□ -1.07
RGPD6-206ENST00000459645 SMARCA4P51532 1647 aa8.35□□□□□ -1.07
RGPD6-206ENST00000459645 CEP164Q9UPV0 1460 aa8.32□□□□□ -1.08
RGPD6-206ENST00000459645 ZNF608Q9ULD9 1512 aaPredicted RBP8.29□□□□□ -1.08
RGPD6-206ENST00000459645 FANCD2Q9BXW9 1451 aa8.27□□□□□ -1.09
RGPD6-206ENST00000459645 URB2Q14146 1524 aaKnown RBP8.27□□□□□ -1.09
RGPD6-206ENST00000459645 PEG3Q9GZU2 1588 aa8.26□□□□□ -1.09
RGPD6-206ENST00000459645 RSF1Q96T23 1441 aaPredicted RBP8.24□□□□□ -1.09
RGPD6-206ENST00000459645 KDM4FA0A1W2PPD8 638 aa8.21□□□□□ -1.1
RGPD6-206ENST00000459645 FBLN2P98095 1184 aa8.2□□□□□ -1.1
RGPD6-206ENST00000459645 MROH2BQ7Z745 1585 aa8.18□□□□□ -1.1
RGPD6-206ENST00000459645 IFT140Q96RY7 1462 aa8.17□□□□□ -1.1
RGPD6-206ENST00000459645 CFTRP13569 1480 aa8.14□□□□□ -1.11
RGPD6-206ENST00000459645 AQRO60306 1485 aaKnown RBP eCLIP8.13□□□□□ -1.11
RGPD6-206ENST00000459645 CHD1O14646 1710 aa8.13□□□□□ -1.11
RGPD6-206ENST00000459645 EIF4G3O43432 1585 aaKnown RBP8.13□□□□□ -1.11
RGPD6-206ENST00000459645 CLASP1Q7Z460 1538 aa8.09□□□□□ -1.11
RGPD6-206ENST00000459645 FBXO41Q8TF61 875 aa8.08□□□□□ -1.12
RGPD6-206ENST00000459645 GAPVD1Q14C86 1478 aa8.07□□□□□ -1.12
RGPD6-206ENST00000459645 MYT1Q01538 1121 aa8.06□□□□□ -1.12
RGPD6-206ENST00000459645 LMTK3Q96Q04 1460 aa8.05□□□□□ -1.12
RGPD6-206ENST00000459645 TOPBP1Q92547 1522 aa8.04□□□□□ -1.12
RGPD6-206ENST00000459645 ILDR2Q71H61 639 aa8.03□□□□□ -1.12
RGPD6-206ENST00000459645 SOCS7O14512 581 aa8.02□□□□□ -1.13
RGPD6-206ENST00000459645 CHMP7Q8WUX9 453 aaPredicted RBP8.01□□□□□ -1.13
RGPD6-206ENST00000459645 ERCC6L2Q5T890 1561 aa8.01□□□□□ -1.13
RGPD6-206ENST00000459645 HECW2Q9P2P5 1572 aa8.01□□□□□ -1.13
RGPD6-206ENST00000459645 TDRD9Q8NDG6 1382 aaKnown RBP8□□□□□ -1.13
RGPD6-206ENST00000459645 WIZO95785 1651 aa8□□□□□ -1.13
RGPD6-206ENST00000459645 SNAPC4Q5SXM2 1469 aa8□□□□□ -1.13
RGPD6-206ENST00000459645 TARBP1Q13395 1621 aaKnown RBP8□□□□□ -1.13
RGPD6-206ENST00000459645 SYNJ1O43426 1573 aa7.98□□□□□ -1.13
RGPD6-206ENST00000459645 FAM69CQ0P6D2 419 aa7.97□□□□□ -1.13
RGPD6-206ENST00000459645 SYNJ2O15056 1496 aa7.95□□□□□ -1.14
RGPD6-206ENST00000459645 ADGRL1O94910 1474 aa7.95□□□□□ -1.14
RGPD6-206ENST00000459645 RAD54L2Q9Y4B4 1467 aa7.95□□□□□ -1.14
RGPD6-206ENST00000459645 KIF13AQ9H1H9 1805 aa7.95□□□□□ -1.14
RGPD6-206ENST00000459645 TTBK1Q5TCY1 1321 aaPredicted RBP7.94□□□□□ -1.14
RGPD6-206ENST00000459645 POLA1P09884 1462 aaPredicted RBP7.94□□□□□ -1.14
RGPD6-206ENST00000459645 DNMBPQ6XZF7 1577 aa7.93□□□□□ -1.14
RGPD6-206ENST00000459645 ABCC8Q09428 1581 aa7.92□□□□□ -1.14
RGPD6-206ENST00000459645 KDM6BO15054 1643 aa7.92□□□□□ -1.14
RGPD6-206ENST00000459645 ABCC10Q5T3U5 1492 aa7.91□□□□□ -1.14
RGPD6-206ENST00000459645 MAGI1Q96QZ7 1491 aaPredicted RBP7.91□□□□□ -1.14
RGPD6-206ENST00000459645 DISP3Q9P2K9 1392 aa7.9□□□□□ -1.14
RGPD6-206ENST00000459645 PELP1Q8IZL8 1130 aaKnown RBP7.9□□□□□ -1.14
RGPD6-206ENST00000459645 SOGA1O94964 1423 aa7.89□□□□□ -1.15
RGPD6-206ENST00000459645 GRIN2BQ13224 1484 aa7.87□□□□□ -1.15
RGPD6-206ENST00000459645 CEP170Q5SW79 1584 aa7.85□□□□□ -1.15
RGPD6-206ENST00000459645 TOP2AP11388 1531 aaKnown RBP7.85□□□□□ -1.15
RGPD6-206ENST00000459645 DIP2BQ9P265 1576 aa7.84□□□□□ -1.15
RGPD6-206ENST00000459645 PRDM2Q13029 1718 aa7.83□□□□□ -1.16
RGPD6-206ENST00000459645 CCDC88BA6NC98 1476 aa7.82□□□□□ -1.16
RGPD6-206ENST00000459645 SLC24A1O60721 1099 aa7.81□□□□□ -1.16
RGPD6-206ENST00000459645 MAPKBP1O60336 1514 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms