RNA–Protein interactions for RNA: ENST00000456848.1

LINC00445-202, long intergenic non-protein coding RNA 445, humanhuman

TSL 3 BASIC

Gene LINC00445, Length 643 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00445-202ENST00000456848 AEBP2Q6ZN18 517 aaPredicted RBP23.53■■□□□ 1.36
LINC00445-202ENST00000456848 CHIC1Q5VXU3 224 aa22.59■■□□□ 1.21
LINC00445-202ENST00000456848 NISCHQ9Y2I1 1504 aa21.18■□□□□ 0.98
LINC00445-202ENST00000456848 SENP3Q9H4L4 574 aaPredicted RBP19.94■□□□□ 0.78
LINC00445-202ENST00000456848 PHF23Q9BUL5 403 aaPredicted RBP19.89■□□□□ 0.77
LINC00445-202ENST00000456848 CCDC180Q9P1Z9 1646 aa18.93■□□□□ 0.62
LINC00445-202ENST00000456848 FOXD1Q16676 465 aa18.6■□□□□ 0.57
LINC00445-202ENST00000456848 ABCC9O60706 1549 aa18.54■□□□□ 0.56
LINC00445-202ENST00000456848 PLPPR3Q6T4P5 718 aa18.13■□□□□ 0.49
LINC00445-202ENST00000456848 RB1CC1Q8TDY2 1594 aa17.87■□□□□ 0.45
LINC00445-202ENST00000456848 NACADO15069 1562 aa17.83■□□□□ 0.45
LINC00445-202ENST00000456848 MYO15BQ96JP2 1530 aa17.76■□□□□ 0.43
LINC00445-202ENST00000456848 PPP6R1Q9UPN7 881 aa17.66■□□□□ 0.42
LINC00445-202ENST00000456848 ZCCHC6Q5VYS8 1495 aaKnown RBP17.63■□□□□ 0.41
LINC00445-202ENST00000456848 DCAF1Q9Y4B6 1507 aa17.61■□□□□ 0.41
LINC00445-202ENST00000456848 DCAF8L2P0C7V8 631 aa17.6■□□□□ 0.41
LINC00445-202ENST00000456848 ADRA2BP18089 450 aa17.57■□□□□ 0.4
LINC00445-202ENST00000456848 PIAS4Q8N2W9 510 aaPredicted RBP17.38■□□□□ 0.37
LINC00445-202ENST00000456848 UNC13AQ9UPW8 1703 aa17.35■□□□□ 0.37
LINC00445-202ENST00000456848 BICRAQ9NZM4 1560 aa17.28■□□□□ 0.36
LINC00445-202ENST00000456848 SHROOM4Q9ULL8 1493 aa17.26■□□□□ 0.35
LINC00445-202ENST00000456848 PABPN1Q86U42 306 aaKnown RBP eCLIP17.26■□□□□ 0.35
LINC00445-202ENST00000456848 MSH5O43196 834 aa17.23■□□□□ 0.35
LINC00445-202ENST00000456848 SCRIBQ14160 1630 aa17.15■□□□□ 0.34
LINC00445-202ENST00000456848 DNAJC5BQ9UF47 199 aa17.1■□□□□ 0.33
LINC00445-202ENST00000456848 EIF4G1Q04637 1599 aaKnown RBP16.85■□□□□ 0.29
LINC00445-202ENST00000456848 CC2D2AQ9P2K1 1620 aa16.79■□□□□ 0.28
LINC00445-202ENST00000456848 CECR2Q9BXF3 1484 aa16.73■□□□□ 0.27
LINC00445-202ENST00000456848 KCNA4P22459 653 aa16.69■□□□□ 0.26
LINC00445-202ENST00000456848 EHMT2Q96KQ7 1210 aa16.6■□□□□ 0.25
LINC00445-202ENST00000456848 NCAPD3P42695 1498 aa16.46■□□□□ 0.23
LINC00445-202ENST00000456848 BAZ1AQ9NRL2 1556 aaPredicted RBP16.45■□□□□ 0.22
LINC00445-202ENST00000456848 SMARCA4P51532 1647 aa16.45■□□□□ 0.22
LINC00445-202ENST00000456848 SMARCA2P51531 1590 aa16.43■□□□□ 0.22
LINC00445-202ENST00000456848 ATAD2BQ9ULI0 1458 aa16.41■□□□□ 0.22
LINC00445-202ENST00000456848 HMGXB3Q12766 1538 aa16.38■□□□□ 0.21
LINC00445-202ENST00000456848 POTEDQ86YR6 584 aa16.36■□□□□ 0.21
LINC00445-202ENST00000456848 PEG3Q9GZU2 1588 aa16.35■□□□□ 0.21
LINC00445-202ENST00000456848 MROH2BQ7Z745 1585 aa16.27■□□□□ 0.2
LINC00445-202ENST00000456848 BAZ1BQ9UIG0 1483 aaKnown RBP16.27■□□□□ 0.19
LINC00445-202ENST00000456848 DNAJC5Q9H3Z4 198 aa16.2■□□□□ 0.18
LINC00445-202ENST00000456848 MAPK8IP2Q13387 824 aaPredicted RBP16.07■□□□□ 0.16
LINC00445-202ENST00000456848 RSF1Q96T23 1441 aaPredicted RBP16.07■□□□□ 0.16
LINC00445-202ENST00000456848 WIZO95785 1651 aa16.05■□□□□ 0.16
LINC00445-202ENST00000456848 PPP4R3CPQ6ZMV5 832 aa16.04■□□□□ 0.16
LINC00445-202ENST00000456848 LAMC3Q9Y6N6 1575 aa16.04■□□□□ 0.16
LINC00445-202ENST00000456848 ERCC6Q03468 1493 aa16.03■□□□□ 0.16
LINC00445-202ENST00000456848 CSRNP3Q8WYN3 585 aa16.02■□□□□ 0.16
LINC00445-202ENST00000456848 SLC4A1APQ9BWU0 796 aaKnown RBP16.02■□□□□ 0.16
LINC00445-202ENST00000456848 SCAF1Q9H7N4 1312 aaKnown RBP16■□□□□ 0.15
LINC00445-202ENST00000456848 CUX2O14529 1486 aa15.98■□□□□ 0.15
LINC00445-202ENST00000456848 NESP48681 1621 aa15.98■□□□□ 0.15
LINC00445-202ENST00000456848 TOP2AP11388 1531 aaKnown RBP15.97■□□□□ 0.15
LINC00445-202ENST00000456848 CADPSQ9ULU8 1353 aa15.95■□□□□ 0.14
LINC00445-202ENST00000456848 PDS5BQ9NTI5 1447 aa15.94■□□□□ 0.14
LINC00445-202ENST00000456848 DMRT2Q9Y5R5 561 aa15.89■□□□□ 0.13
LINC00445-202ENST00000456848 CFTRP13569 1480 aa15.84■□□□□ 0.13
LINC00445-202ENST00000456848 THOC2Q8NI27 1593 aaKnown RBP15.83■□□□□ 0.13
LINC00445-202ENST00000456848 NCBP3Q53F19 620 aaKnown RBP15.83■□□□□ 0.12
LINC00445-202ENST00000456848 KIF21AQ7Z4S6 1674 aa15.79■□□□□ 0.12
LINC00445-202ENST00000456848 MRC2Q9UBG0 1479 aa15.77■□□□□ 0.11
LINC00445-202ENST00000456848 CEP164Q9UPV0 1460 aa15.76■□□□□ 0.11
LINC00445-202ENST00000456848 FANCD2Q9BXW9 1451 aa15.74■□□□□ 0.11
LINC00445-202ENST00000456848 CCDC88BA6NC98 1476 aa15.73■□□□□ 0.11
LINC00445-202ENST00000456848 WDR62O43379 1518 aa15.72■□□□□ 0.11
LINC00445-202ENST00000456848 PRDM2Q13029 1718 aa15.66■□□□□ 0.1
LINC00445-202ENST00000456848 NPM3O75607 178 aaKnown RBP15.65■□□□□ 0.1
LINC00445-202ENST00000456848 CNKSR2Q8WXI2 1034 aa15.58■□□□□ 0.08
LINC00445-202ENST00000456848 URB2Q14146 1524 aaKnown RBP15.58■□□□□ 0.08
LINC00445-202ENST00000456848 ABCC8Q09428 1581 aa15.54■□□□□ 0.08
LINC00445-202ENST00000456848 TOPBP1Q92547 1522 aa15.48■□□□□ 0.07
LINC00445-202ENST00000456848 DNMBPQ6XZF7 1577 aa15.46■□□□□ 0.07
LINC00445-202ENST00000456848 IFT140Q96RY7 1462 aa15.46■□□□□ 0.06
LINC00445-202ENST00000456848 SUPT5HO00267 1087 aaKnown RBP15.45■□□□□ 0.06
LINC00445-202ENST00000456848 HOXD11P31277 338 aaPredicted RBP15.45■□□□□ 0.06
LINC00445-202ENST00000456848 ZBTB22O15209 634 aa15.38■□□□□ 0.05
LINC00445-202ENST00000456848 RNF216Q9NWF9 866 aaPredicted RBP15.38■□□□□ 0.05
LINC00445-202ENST00000456848 POLA1P09884 1462 aaPredicted RBP15.33■□□□□ 0.05
LINC00445-202ENST00000456848 ZNF608Q9ULD9 1512 aaPredicted RBP15.31■□□□□ 0.04
LINC00445-202ENST00000456848 TARBP1Q13395 1621 aaKnown RBP15.31■□□□□ 0.04
LINC00445-202ENST00000456848 CUX1P39880 1505 aa15.29■□□□□ 0.04
LINC00445-202ENST00000456848 WDR97A6NE52 1622 aa15.28■□□□□ 0.04
LINC00445-202ENST00000456848 EIF4G3O43432 1585 aaKnown RBP15.28■□□□□ 0.04
LINC00445-202ENST00000456848 FGD5Q6ZNL6 1462 aa15.27■□□□□ 0.03
LINC00445-202ENST00000456848 SOGA1O94964 1423 aa15.26■□□□□ 0.03
LINC00445-202ENST00000456848 OSCARQ8IYS5 282 aa15.24■□□□□ 0.03
LINC00445-202ENST00000456848 RAD54L2Q9Y4B4 1467 aa15.21■□□□□ 0.03
LINC00445-202ENST00000456848 AQRO60306 1485 aaKnown RBP eCLIP15.2■□□□□ 0.02
LINC00445-202ENST00000456848 WRNQ14191 1432 aaPredicted RBP eCLIP15.17■□□□□ 0.02
LINC00445-202ENST00000456848 TDRD9Q8NDG6 1382 aaKnown RBP15.16■□□□□ 0.02
LINC00445-202ENST00000456848 ABCA10Q8WWZ4 1543 aa15.16■□□□□ 0.02
LINC00445-202ENST00000456848 TOP2BQ02880 1626 aa15.15■□□□□ 0.02
LINC00445-202ENST00000456848 BIVM-ERCC5R4GMW8 1640 aa15.14■□□□□ 0.01
LINC00445-202ENST00000456848 GRIN2BQ13224 1484 aa15.14■□□□□ 0.01
LINC00445-202ENST00000456848 MAGI1Q96QZ7 1491 aaPredicted RBP15.14■□□□□ 0.01
LINC00445-202ENST00000456848 GAPVD1Q14C86 1478 aa15.09■□□□□ 0.01
LINC00445-202ENST00000456848 SNAPC4Q5SXM2 1469 aa15.09■□□□□ 0.01
LINC00445-202ENST00000456848 DCAF8L1A6NGE4 600 aa15.09■□□□□ 0.01
LINC00445-202ENST00000456848 SYNJ1O43426 1573 aa15.09■□□□□ 0.01
LINC00445-202ENST00000456848 ABCA5Q8WWZ7 1642 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms