RNA–Protein interactions for RNA: ENST00000452692.5

GLI2-211, Transcript of GLI family zinc finger 2, humanhuman

TSL 5

Gene GLI2, Length 3,673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GLI2-211ENST00000452692 NISCHQ9Y2I1 1504 aa28.3■■■□□ 2.12
GLI2-211ENST00000452692 DCAF8L2P0C7V8 631 aa25.24■■□□□ 1.63
GLI2-211ENST00000452692 SHROOM4Q9ULL8 1493 aa24.52■■□□□ 1.52
GLI2-211ENST00000452692 ABCC9O60706 1549 aa24.14■■□□□ 1.45
GLI2-211ENST00000452692 CCDC180Q9P1Z9 1646 aa24.04■■□□□ 1.44
GLI2-211ENST00000452692 SUPT5HO00267 1087 aaKnown RBP23.71■■□□□ 1.39
GLI2-211ENST00000452692 ZCCHC6Q5VYS8 1495 aaKnown RBP23.62■■□□□ 1.37
GLI2-211ENST00000452692 PABPN1Q86U42 306 aaKnown RBP eCLIP23.21■■□□□ 1.31
GLI2-211ENST00000452692 SCRIBQ14160 1630 aa23.11■■□□□ 1.29
GLI2-211ENST00000452692 DCAF1Q9Y4B6 1507 aa22.78■■□□□ 1.24
GLI2-211ENST00000452692 NACADO15069 1562 aa22.74■■□□□ 1.23
GLI2-211ENST00000452692 RB1CC1Q8TDY2 1594 aa22.73■■□□□ 1.23
GLI2-211ENST00000452692 CECR2Q9BXF3 1484 aa22.43■■□□□ 1.18
GLI2-211ENST00000452692 MYO15BQ96JP2 1530 aa22.39■■□□□ 1.17
GLI2-211ENST00000452692 EHMT2Q96KQ7 1210 aa22.33■■□□□ 1.17
GLI2-211ENST00000452692 RSF1Q96T23 1441 aaPredicted RBP22.21■■□□□ 1.15
GLI2-211ENST00000452692 FAM9AQ8IZU1 332 aaPredicted RBP22.13■■□□□ 1.13
GLI2-211ENST00000452692 PELP1Q8IZL8 1130 aaKnown RBP22.12■■□□□ 1.13
GLI2-211ENST00000452692 MROH2BQ7Z745 1585 aa22.11■■□□□ 1.13
GLI2-211ENST00000452692 CHIC1Q5VXU3 224 aa22.03■■□□□ 1.12
GLI2-211ENST00000452692 UNC13AQ9UPW8 1703 aa21.97■■□□□ 1.11
GLI2-211ENST00000452692 BICRAQ9NZM4 1560 aa21.94■■□□□ 1.1
GLI2-211ENST00000452692 TRIM41Q8WV44 630 aa21.92■■□□□ 1.1
GLI2-211ENST00000452692 HRCP23327 699 aa21.89■■□□□ 1.1
GLI2-211ENST00000452692 WIZO95785 1651 aa21.89■■□□□ 1.09
GLI2-211ENST00000452692 BAZ1AQ9NRL2 1556 aaPredicted RBP21.81■■□□□ 1.08
GLI2-211ENST00000452692 PPARGC1BQ86YN6 1023 aaKnown RBP21.79■■□□□ 1.08
GLI2-211ENST00000452692 LOC105371045A0A1W2PR82 267 aa21.7■■□□□ 1.07
GLI2-211ENST00000452692 SMARCA4P51532 1647 aa21.68■■□□□ 1.06
GLI2-211ENST00000452692 DNAJC5BQ9UF47 199 aa21.6■■□□□ 1.05
GLI2-211ENST00000452692 BAZ1BQ9UIG0 1483 aaKnown RBP21.6■■□□□ 1.05
GLI2-211ENST00000452692 ATAD2BQ9ULI0 1458 aa21.54■■□□□ 1.04
GLI2-211ENST00000452692 CCDC88BA6NC98 1476 aa21.52■■□□□ 1.04
GLI2-211ENST00000452692 RANGAP1P46060 587 aaPredicted RBP21.52■■□□□ 1.04
GLI2-211ENST00000452692 EIF4G1Q04637 1599 aaKnown RBP21.5■■□□□ 1.03
GLI2-211ENST00000452692 MYT1Q01538 1121 aa21.39■■□□□ 1.02
GLI2-211ENST00000452692 TOP2AP11388 1531 aaKnown RBP21.37■■□□□ 1.01
GLI2-211ENST00000452692 PCGF6Q9BYE7 350 aa21.37■■□□□ 1.01
GLI2-211ENST00000452692 SMARCA2P51531 1590 aa21.32■■□□□ 1
GLI2-211ENST00000452692 SCAF1Q9H7N4 1312 aaKnown RBP21.32■■□□□ 1
GLI2-211ENST00000452692 ABCC8Q09428 1581 aa21.29■■□□□ 1
GLI2-211ENST00000452692 TTBK1Q5TCY1 1321 aaPredicted RBP21.27■■□□□ 1
GLI2-211ENST00000452692 CC2D2AQ9P2K1 1620 aa21.27■□□□□ 0.99
GLI2-211ENST00000452692 UBTFP17480 764 aaKnown RBP21.22■□□□□ 0.99
GLI2-211ENST00000452692 NCAPD3P42695 1498 aa21.15■□□□□ 0.98
GLI2-211ENST00000452692 WRNQ14191 1432 aaPredicted RBP eCLIP21.05■□□□□ 0.96
GLI2-211ENST00000452692 NESP48681 1621 aa21.04■□□□□ 0.96
GLI2-211ENST00000452692 SOGA1O94964 1423 aa20.99■□□□□ 0.95
GLI2-211ENST00000452692 CADPSQ9ULU8 1353 aa20.96■□□□□ 0.95
GLI2-211ENST00000452692 PEG3Q9GZU2 1588 aa20.96■□□□□ 0.95
GLI2-211ENST00000452692 CSRNP3Q8WYN3 585 aa20.94■□□□□ 0.94
GLI2-211ENST00000452692 RUSC2Q8N2Y8 1516 aa20.9■□□□□ 0.94
GLI2-211ENST00000452692 HMGXB3Q12766 1538 aa20.89■□□□□ 0.93
GLI2-211ENST00000452692 ATP1B4Q9UN42 357 aaPredicted RBP20.8■□□□□ 0.92
GLI2-211ENST00000452692 CFTRP13569 1480 aa20.76■□□□□ 0.91
GLI2-211ENST00000452692 FANCD2Q9BXW9 1451 aa20.76■□□□□ 0.91
GLI2-211ENST00000452692 FBLN2P98095 1184 aa20.75■□□□□ 0.91
GLI2-211ENST00000452692 P3H3Q8IVL6 736 aa20.72■□□□□ 0.91
GLI2-211ENST00000452692 SYNJ1O43426 1573 aa20.72■□□□□ 0.91
GLI2-211ENST00000452692 ERCC6Q03468 1493 aa20.71■□□□□ 0.91
GLI2-211ENST00000452692 TDRD9Q8NDG6 1382 aaKnown RBP20.65■□□□□ 0.9
GLI2-211ENST00000452692 PDS5BQ9NTI5 1447 aa20.62■□□□□ 0.89
GLI2-211ENST00000452692 CUX2O14529 1486 aa20.61■□□□□ 0.89
GLI2-211ENST00000452692 RAD54L2Q9Y4B4 1467 aa20.61■□□□□ 0.89
GLI2-211ENST00000452692 CEP164Q9UPV0 1460 aa20.59■□□□□ 0.89
GLI2-211ENST00000452692 CUX1P39880 1505 aa20.58■□□□□ 0.89
GLI2-211ENST00000452692 APLP2Q06481 763 aa20.55■□□□□ 0.88
GLI2-211ENST00000452692 FGD5Q6ZNL6 1462 aa20.53■□□□□ 0.88
GLI2-211ENST00000452692 ARID3CA6NKF2 412 aa20.52■□□□□ 0.88
GLI2-211ENST00000452692 KIF27Q86VH2 1401 aa20.5■□□□□ 0.87
GLI2-211ENST00000452692 GTF3C3Q9Y5Q9 886 aa20.49■□□□□ 0.87
GLI2-211ENST00000452692 NEUROD1Q13562 356 aa20.48■□□□□ 0.87
GLI2-211ENST00000452692 TRIM26Q12899 539 aaPredicted RBP20.47■□□□□ 0.87
GLI2-211ENST00000452692 RAPGEF2Q9Y4G8 1499 aa20.44■□□□□ 0.86
GLI2-211ENST00000452692 ACIN1Q9UKV3 1341 aaKnown RBP20.43■□□□□ 0.86
GLI2-211ENST00000452692 CEP162Q5TB80 1403 aa20.39■□□□□ 0.86
GLI2-211ENST00000452692 TOPBP1Q92547 1522 aa20.39■□□□□ 0.86
GLI2-211ENST00000452692 TOP2BQ02880 1626 aa20.38■□□□□ 0.85
GLI2-211ENST00000452692 URB2Q14146 1524 aaKnown RBP20.37■□□□□ 0.85
GLI2-211ENST00000452692 CARMIL1Q5VZK9 1371 aa20.37■□□□□ 0.85
GLI2-211ENST00000452692 GOLGA3Q08378 1498 aa20.37■□□□□ 0.85
GLI2-211ENST00000452692 AQRO60306 1485 aaKnown RBP eCLIP20.36■□□□□ 0.85
GLI2-211ENST00000452692 POLA1P09884 1462 aaPredicted RBP20.36■□□□□ 0.85
GLI2-211ENST00000452692 BCL11AQ9H165 835 aa20.35■□□□□ 0.85
GLI2-211ENST00000452692 EEA1Q15075 1411 aa20.35■□□□□ 0.85
GLI2-211ENST00000452692 LAMC3Q9Y6N6 1575 aa20.33■□□□□ 0.84
GLI2-211ENST00000452692 IGF1RP08069 1367 aa20.33■□□□□ 0.84
GLI2-211ENST00000452692 CHMP7Q8WUX9 453 aaPredicted RBP20.32■□□□□ 0.84
GLI2-211ENST00000452692 CLIP1P30622 1438 aa20.3■□□□□ 0.84
GLI2-211ENST00000452692 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.3■□□□□ 0.84
GLI2-211ENST00000452692 ITGAEP38570 1179 aa20.3■□□□□ 0.84
GLI2-211ENST00000452692 HNRNPUL2Q1KMD3 747 aaKnown RBP20.3■□□□□ 0.84
GLI2-211ENST00000452692 TNIKQ9UKE5 1360 aa20.28■□□□□ 0.84
GLI2-211ENST00000452692 KIF21AQ7Z4S6 1674 aa20.25■□□□□ 0.83
GLI2-211ENST00000452692 MRC2Q9UBG0 1479 aa20.21■□□□□ 0.83
GLI2-211ENST00000452692 DNMBPQ6XZF7 1577 aa20.2■□□□□ 0.82
GLI2-211ENST00000452692 ZNF608Q9ULD9 1512 aaPredicted RBP20.18■□□□□ 0.82
GLI2-211ENST00000452692 GAPVD1Q14C86 1478 aa20.17■□□□□ 0.82
GLI2-211ENST00000452692 PRKCSHP14314 528 aaPredicted RBP20.16■□□□□ 0.82
GLI2-211ENST00000452692 BIVM-ERCC5R4GMW8 1640 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms