RNA–Protein interactions for RNA: ENST00000451422.1

ANKRD28-204, Transcript of ankyrin repeat domain 28, humanhuman

TSL 2

Gene ANKRD28, Length 2,485 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD28-204ENST00000451422 NISCHQ9Y2I1 1504 aa15.74■□□□□ 0.11
ANKRD28-204ENST00000451422 SHROOM4Q9ULL8 1493 aa13.51□□□□□ -0.25
ANKRD28-204ENST00000451422 CCDC180Q9P1Z9 1646 aa13.39□□□□□ -0.27
ANKRD28-204ENST00000451422 ZCCHC6Q5VYS8 1495 aaKnown RBP13.29□□□□□ -0.28
ANKRD28-204ENST00000451422 DCAF8L2P0C7V8 631 aa13.23□□□□□ -0.29
ANKRD28-204ENST00000451422 ABCC9O60706 1549 aa13.22□□□□□ -0.29
ANKRD28-204ENST00000451422 SUPT5HO00267 1087 aaKnown RBP13.22□□□□□ -0.29
ANKRD28-204ENST00000451422 DCAF1Q9Y4B6 1507 aa12.85□□□□□ -0.35
ANKRD28-204ENST00000451422 CHIC1Q5VXU3 224 aa12.77□□□□□ -0.37
ANKRD28-204ENST00000451422 MYO15BQ96JP2 1530 aa12.7□□□□□ -0.38
ANKRD28-204ENST00000451422 RB1CC1Q8TDY2 1594 aa12.68□□□□□ -0.38
ANKRD28-204ENST00000451422 NACADO15069 1562 aa12.62□□□□□ -0.39
ANKRD28-204ENST00000451422 SCRIBQ14160 1630 aa12.61□□□□□ -0.39
ANKRD28-204ENST00000451422 RSF1Q96T23 1441 aaPredicted RBP12.46□□□□□ -0.41
ANKRD28-204ENST00000451422 UNC13AQ9UPW8 1703 aa12.46□□□□□ -0.42
ANKRD28-204ENST00000451422 DNAJC5BQ9UF47 199 aa12.45□□□□□ -0.42
ANKRD28-204ENST00000451422 LOC105371045A0A1W2PR82 267 aa12.44□□□□□ -0.42
ANKRD28-204ENST00000451422 BICRAQ9NZM4 1560 aa12.36□□□□□ -0.43
ANKRD28-204ENST00000451422 PCGF6Q9BYE7 350 aa12.35□□□□□ -0.43
ANKRD28-204ENST00000451422 CECR2Q9BXF3 1484 aa12.33□□□□□ -0.43
ANKRD28-204ENST00000451422 TRIM41Q8WV44 630 aa12.28□□□□□ -0.44
ANKRD28-204ENST00000451422 MROH2BQ7Z745 1585 aa12.26□□□□□ -0.45
ANKRD28-204ENST00000451422 HRCP23327 699 aa12.26□□□□□ -0.45
ANKRD28-204ENST00000451422 PABPN1Q86U42 306 aaKnown RBP eCLIP12.25□□□□□ -0.45
ANKRD28-204ENST00000451422 FAM9AQ8IZU1 332 aaPredicted RBP12.24□□□□□ -0.45
ANKRD28-204ENST00000451422 WIZO95785 1651 aa12.2□□□□□ -0.46
ANKRD28-204ENST00000451422 EHMT2Q96KQ7 1210 aa12.19□□□□□ -0.46
ANKRD28-204ENST00000451422 PPARGC1BQ86YN6 1023 aaKnown RBP12.09□□□□□ -0.47
ANKRD28-204ENST00000451422 BAZ1AQ9NRL2 1556 aaPredicted RBP12.08□□□□□ -0.48
ANKRD28-204ENST00000451422 TRIM26Q12899 539 aaPredicted RBP12.07□□□□□ -0.48
ANKRD28-204ENST00000451422 CC2D2AQ9P2K1 1620 aa12.02□□□□□ -0.48
ANKRD28-204ENST00000451422 EIF4G1Q04637 1599 aaKnown RBP12.01□□□□□ -0.49
ANKRD28-204ENST00000451422 SMARCA4P51532 1647 aa12□□□□□ -0.49
ANKRD28-204ENST00000451422 TOP2AP11388 1531 aaKnown RBP11.96□□□□□ -0.49
ANKRD28-204ENST00000451422 CCDC88BA6NC98 1476 aa11.95□□□□□ -0.5
ANKRD28-204ENST00000451422 ABCC8Q09428 1581 aa11.93□□□□□ -0.5
ANKRD28-204ENST00000451422 SMARCA2P51531 1590 aa11.91□□□□□ -0.5
ANKRD28-204ENST00000451422 SOGA1O94964 1423 aa11.81□□□□□ -0.52
ANKRD28-204ENST00000451422 TTBK1Q5TCY1 1321 aaPredicted RBP11.77□□□□□ -0.52
ANKRD28-204ENST00000451422 RUSC2Q8N2Y8 1516 aa11.76□□□□□ -0.53
ANKRD28-204ENST00000451422 ZEB1P37275 1124 aaPredicted RBP11.74□□□□□ -0.53
ANKRD28-204ENST00000451422 CSRNP3Q8WYN3 585 aa11.73□□□□□ -0.53
ANKRD28-204ENST00000451422 UBTFP17480 764 aaKnown RBP11.72□□□□□ -0.53
ANKRD28-204ENST00000451422 PEG3Q9GZU2 1588 aa11.72□□□□□ -0.53
ANKRD28-204ENST00000451422 ATAD2BQ9ULI0 1458 aa11.72□□□□□ -0.53
ANKRD28-204ENST00000451422 WRNQ14191 1432 aaPredicted RBP eCLIP11.71□□□□□ -0.53
ANKRD28-204ENST00000451422 CEP162Q5TB80 1403 aa11.71□□□□□ -0.53
ANKRD28-204ENST00000451422 BAZ1BQ9UIG0 1483 aaKnown RBP11.7□□□□□ -0.54
ANKRD28-204ENST00000451422 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.67□□□□□ -0.54
ANKRD28-204ENST00000451422 TNIKQ9UKE5 1360 aa11.67□□□□□ -0.54
ANKRD28-204ENST00000451422 EEA1Q15075 1411 aa11.66□□□□□ -0.54
ANKRD28-204ENST00000451422 SYNJ1O43426 1573 aa11.65□□□□□ -0.54
ANKRD28-204ENST00000451422 NCAPD3P42695 1498 aa11.64□□□□□ -0.55
ANKRD28-204ENST00000451422 GOLGA3Q08378 1498 aa11.61□□□□□ -0.55
ANKRD28-204ENST00000451422 CCER1Q8TC90 406 aaPredicted RBP11.61□□□□□ -0.55
ANKRD28-204ENST00000451422 RANGAP1P46060 587 aaPredicted RBP11.59□□□□□ -0.55
ANKRD28-204ENST00000451422 HMGXB3Q12766 1538 aa11.57□□□□□ -0.56
ANKRD28-204ENST00000451422 CEP164Q9UPV0 1460 aa11.55□□□□□ -0.56
ANKRD28-204ENST00000451422 RAPGEF2Q9Y4G8 1499 aa11.51□□□□□ -0.57
ANKRD28-204ENST00000451422 CLIP1P30622 1438 aa11.51□□□□□ -0.57
ANKRD28-204ENST00000451422 CUX2O14529 1486 aa11.51□□□□□ -0.57
ANKRD28-204ENST00000451422 KIF21BO75037 1637 aa11.5□□□□□ -0.57
ANKRD28-204ENST00000451422 TOP2BQ02880 1626 aa11.48□□□□□ -0.57
ANKRD28-204ENST00000451422 DNAJC5Q9H3Z4 198 aa11.47□□□□□ -0.57
ANKRD28-204ENST00000451422 HNRNPUL2Q1KMD3 747 aaKnown RBP11.45□□□□□ -0.58
ANKRD28-204ENST00000451422 VPS8Q8N3P4 1428 aa11.43□□□□□ -0.58
ANKRD28-204ENST00000451422 APLP2Q06481 763 aa11.43□□□□□ -0.58
ANKRD28-204ENST00000451422 BIVM-ERCC5R4GMW8 1640 aa11.42□□□□□ -0.58
ANKRD28-204ENST00000451422 CUX1P39880 1505 aa11.41□□□□□ -0.58
ANKRD28-204ENST00000451422 ERCC6Q03468 1493 aa11.4□□□□□ -0.59
ANKRD28-204ENST00000451422 LAMC3Q9Y6N6 1575 aa11.38□□□□□ -0.59
ANKRD28-204ENST00000451422 NESP48681 1621 aa11.38□□□□□ -0.59
ANKRD28-204ENST00000451422 CFTRP13569 1480 aa11.38□□□□□ -0.59
ANKRD28-204ENST00000451422 PRXQ9BXM0 1461 aa11.36□□□□□ -0.59
ANKRD28-204ENST00000451422 THOC2Q8NI27 1593 aaKnown RBP11.36□□□□□ -0.59
ANKRD28-204ENST00000451422 KIF27Q86VH2 1401 aa11.34□□□□□ -0.59
ANKRD28-204ENST00000451422 SLC24A1O60721 1099 aa11.33□□□□□ -0.6
ANKRD28-204ENST00000451422 DIEXFQ68CQ4 756 aaKnown RBP11.33□□□□□ -0.6
ANKRD28-204ENST00000451422 ERICH3Q5RHP9 1530 aa11.33□□□□□ -0.6
ANKRD28-204ENST00000451422 ARAP1Q96P48 1450 aa11.31□□□□□ -0.6
ANKRD28-204ENST00000451422 KANK4Q5T7N3 995 aaPredicted RBP11.3□□□□□ -0.6
ANKRD28-204ENST00000451422 KIF21AQ7Z4S6 1674 aa11.3□□□□□ -0.6
ANKRD28-204ENST00000451422 CADPSQ9ULU8 1353 aa11.28□□□□□ -0.6
ANKRD28-204ENST00000451422 SCAF1Q9H7N4 1312 aaKnown RBP11.28□□□□□ -0.6
ANKRD28-204ENST00000451422 PDS5BQ9NTI5 1447 aa11.26□□□□□ -0.61
ANKRD28-204ENST00000451422 ZNF316A6NFI3 1004 aaPredicted RBP11.25□□□□□ -0.61
ANKRD28-204ENST00000451422 IGF1RP08069 1367 aa11.24□□□□□ -0.61
ANKRD28-204ENST00000451422 FGD5Q6ZNL6 1462 aa11.23□□□□□ -0.61
ANKRD28-204ENST00000451422 ARHGAP35Q9NRY4 1499 aa11.23□□□□□ -0.61
ANKRD28-204ENST00000451422 PRDM2Q13029 1718 aa11.22□□□□□ -0.61
ANKRD28-204ENST00000451422 WDR62O43379 1518 aa11.2□□□□□ -0.62
ANKRD28-204ENST00000451422 CARMIL1Q5VZK9 1371 aa11.2□□□□□ -0.62
ANKRD28-204ENST00000451422 ITGAEP38570 1179 aa11.19□□□□□ -0.62
ANKRD28-204ENST00000451422 NEUROD1Q13562 356 aa11.19□□□□□ -0.62
ANKRD28-204ENST00000451422 FANCD2Q9BXW9 1451 aa11.19□□□□□ -0.62
ANKRD28-204ENST00000451422 MRC2Q9UBG0 1479 aa11.18□□□□□ -0.62
ANKRD28-204ENST00000451422 P3H3Q8IVL6 736 aa11.17□□□□□ -0.62
ANKRD28-204ENST00000451422 ACIN1Q9UKV3 1341 aaKnown RBP11.17□□□□□ -0.62
ANKRD28-204ENST00000451422 RAD54L2Q9Y4B4 1467 aa11.15□□□□□ -0.62
ANKRD28-204ENST00000451422 DHX57Q6P158 1386 aaKnown RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms