RNA–Protein interactions for RNA: ENST00000449911.2

SSU72P1-201, Transcript of SSU72 pseudogene 1, humanhuman

BASIC

Gene SSU72P1, Length 583 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72P1-201ENST00000449911 AEBP2Q6ZN18 517 aaPredicted RBP26.44■■□□□ 1.82
SSU72P1-201ENST00000449911 CHIC1Q5VXU3 224 aa25.18■■□□□ 1.62
SSU72P1-201ENST00000449911 NISCHQ9Y2I1 1504 aa23.08■■□□□ 1.28
SSU72P1-201ENST00000449911 SENP3Q9H4L4 574 aaPredicted RBP22.58■■□□□ 1.21
SSU72P1-201ENST00000449911 PHF23Q9BUL5 403 aaPredicted RBP22.26■■□□□ 1.15
SSU72P1-201ENST00000449911 FOXD1Q16676 465 aa21.01■□□□□ 0.95
SSU72P1-201ENST00000449911 CCDC180Q9P1Z9 1646 aa20.56■□□□□ 0.88
SSU72P1-201ENST00000449911 PLPPR3Q6T4P5 718 aa20.14■□□□□ 0.81
SSU72P1-201ENST00000449911 ABCC9O60706 1549 aa20.08■□□□□ 0.81
SSU72P1-201ENST00000449911 PPP6R1Q9UPN7 881 aa19.68■□□□□ 0.74
SSU72P1-201ENST00000449911 MSH5O43196 834 aa19.67■□□□□ 0.74
SSU72P1-201ENST00000449911 PIAS4Q8N2W9 510 aaPredicted RBP19.65■□□□□ 0.74
SSU72P1-201ENST00000449911 ADRA2BP18089 450 aa19.61■□□□□ 0.73
SSU72P1-201ENST00000449911 RB1CC1Q8TDY2 1594 aa19.36■□□□□ 0.69
SSU72P1-201ENST00000449911 NACADO15069 1562 aa19.32■□□□□ 0.68
SSU72P1-201ENST00000449911 DCAF8L2P0C7V8 631 aa19.31■□□□□ 0.68
SSU72P1-201ENST00000449911 ZCCHC6Q5VYS8 1495 aaKnown RBP19.23■□□□□ 0.67
SSU72P1-201ENST00000449911 MYO15BQ96JP2 1530 aa19.2■□□□□ 0.66
SSU72P1-201ENST00000449911 DCAF1Q9Y4B6 1507 aa19.11■□□□□ 0.65
SSU72P1-201ENST00000449911 POTEDQ86YR6 584 aa19.08■□□□□ 0.64
SSU72P1-201ENST00000449911 UNC13AQ9UPW8 1703 aa18.83■□□□□ 0.61
SSU72P1-201ENST00000449911 SCRIBQ14160 1630 aa18.74■□□□□ 0.59
SSU72P1-201ENST00000449911 PABPN1Q86U42 306 aaKnown RBP eCLIP18.74■□□□□ 0.59
SSU72P1-201ENST00000449911 BICRAQ9NZM4 1560 aa18.68■□□□□ 0.58
SSU72P1-201ENST00000449911 SHROOM4Q9ULL8 1493 aa18.6■□□□□ 0.57
SSU72P1-201ENST00000449911 DNAJC5BQ9UF47 199 aa18.33■□□□□ 0.52
SSU72P1-201ENST00000449911 EIF4G1Q04637 1599 aaKnown RBP18.25■□□□□ 0.51
SSU72P1-201ENST00000449911 CC2D2AQ9P2K1 1620 aa18.16■□□□□ 0.5
SSU72P1-201ENST00000449911 CECR2Q9BXF3 1484 aa18.07■□□□□ 0.48
SSU72P1-201ENST00000449911 MAPK8IP2Q13387 824 aaPredicted RBP17.98■□□□□ 0.47
SSU72P1-201ENST00000449911 SCAF1Q9H7N4 1312 aaKnown RBP17.98■□□□□ 0.47
SSU72P1-201ENST00000449911 BAZ1AQ9NRL2 1556 aaPredicted RBP17.93■□□□□ 0.46
SSU72P1-201ENST00000449911 SMARCA4P51532 1647 aa17.92■□□□□ 0.46
SSU72P1-201ENST00000449911 DMRT2Q9Y5R5 561 aa17.91■□□□□ 0.46
SSU72P1-201ENST00000449911 SMARCA2P51531 1590 aa17.83■□□□□ 0.45
SSU72P1-201ENST00000449911 ATAD2BQ9ULI0 1458 aa17.82■□□□□ 0.44
SSU72P1-201ENST00000449911 NCAPD3P42695 1498 aa17.8■□□□□ 0.44
SSU72P1-201ENST00000449911 MROH2BQ7Z745 1585 aa17.76■□□□□ 0.43
SSU72P1-201ENST00000449911 HMGXB3Q12766 1538 aa17.75■□□□□ 0.43
SSU72P1-201ENST00000449911 PEG3Q9GZU2 1588 aa17.74■□□□□ 0.43
SSU72P1-201ENST00000449911 BAZ1BQ9UIG0 1483 aaKnown RBP17.71■□□□□ 0.43
SSU72P1-201ENST00000449911 PPP4R3CPQ6ZMV5 832 aa17.65■□□□□ 0.42
SSU72P1-201ENST00000449911 WIZO95785 1651 aa17.58■□□□□ 0.4
SSU72P1-201ENST00000449911 RSF1Q96T23 1441 aaPredicted RBP17.56■□□□□ 0.4
SSU72P1-201ENST00000449911 TOP2AP11388 1531 aaKnown RBP17.43■□□□□ 0.38
SSU72P1-201ENST00000449911 ERCC6Q03468 1493 aa17.38■□□□□ 0.37
SSU72P1-201ENST00000449911 LAMC3Q9Y6N6 1575 aa17.37■□□□□ 0.37
SSU72P1-201ENST00000449911 NESP48681 1621 aa17.35■□□□□ 0.37
SSU72P1-201ENST00000449911 CNKSR2Q8WXI2 1034 aa17.32■□□□□ 0.36
SSU72P1-201ENST00000449911 CADPSQ9ULU8 1353 aa17.29■□□□□ 0.36
SSU72P1-201ENST00000449911 HOXD11P31277 338 aaPredicted RBP17.28■□□□□ 0.36
SSU72P1-201ENST00000449911 PDS5BQ9NTI5 1447 aa17.27■□□□□ 0.35
SSU72P1-201ENST00000449911 CCDC88BA6NC98 1476 aa17.19■□□□□ 0.34
SSU72P1-201ENST00000449911 CFTRP13569 1480 aa17.18■□□□□ 0.34
SSU72P1-201ENST00000449911 CUX2O14529 1486 aa17.17■□□□□ 0.34
SSU72P1-201ENST00000449911 KIF21AQ7Z4S6 1674 aa17.16■□□□□ 0.34
SSU72P1-201ENST00000449911 RNF216Q9NWF9 866 aaPredicted RBP17.16■□□□□ 0.34
SSU72P1-201ENST00000449911 SUPT5HO00267 1087 aaKnown RBP17.14■□□□□ 0.33
SSU72P1-201ENST00000449911 DCAF8L1A6NGE4 600 aa17.12■□□□□ 0.33
SSU72P1-201ENST00000449911 CEP164Q9UPV0 1460 aa17.12■□□□□ 0.33
SSU72P1-201ENST00000449911 THOC2Q8NI27 1593 aaKnown RBP17.11■□□□□ 0.33
SSU72P1-201ENST00000449911 FANCD2Q9BXW9 1451 aa17.11■□□□□ 0.33
SSU72P1-201ENST00000449911 PRDM2Q13029 1718 aa17.07■□□□□ 0.32
SSU72P1-201ENST00000449911 MRC2Q9UBG0 1479 aa17.07■□□□□ 0.32
SSU72P1-201ENST00000449911 WDR62O43379 1518 aa17.01■□□□□ 0.31
SSU72P1-201ENST00000449911 NCBP3Q53F19 620 aaKnown RBP17■□□□□ 0.31
SSU72P1-201ENST00000449911 URB2Q14146 1524 aaKnown RBP16.91■□□□□ 0.3
SSU72P1-201ENST00000449911 ABCC8Q09428 1581 aa16.87■□□□□ 0.29
SSU72P1-201ENST00000449911 DNMBPQ6XZF7 1577 aa16.83■□□□□ 0.28
SSU72P1-201ENST00000449911 TOPBP1Q92547 1522 aa16.82■□□□□ 0.28
SSU72P1-201ENST00000449911 CACNB1Q02641 598 aaPredicted RBP16.81■□□□□ 0.28
SSU72P1-201ENST00000449911 RNF39Q9H2S5 420 aa16.79■□□□□ 0.28
SSU72P1-201ENST00000449911 NPM3O75607 178 aaKnown RBP16.75■□□□□ 0.27
SSU72P1-201ENST00000449911 IFT140Q96RY7 1462 aa16.74■□□□□ 0.27
SSU72P1-201ENST00000449911 CUX1P39880 1505 aa16.68■□□□□ 0.26
SSU72P1-201ENST00000449911 POLA1P09884 1462 aaPredicted RBP16.67■□□□□ 0.26
SSU72P1-201ENST00000449911 FGD5Q6ZNL6 1462 aa16.64■□□□□ 0.25
SSU72P1-201ENST00000449911 TARBP1Q13395 1621 aaKnown RBP16.62■□□□□ 0.25
SSU72P1-201ENST00000449911 SOGA1O94964 1423 aa16.62■□□□□ 0.25
SSU72P1-201ENST00000449911 ZNF608Q9ULD9 1512 aaPredicted RBP16.61■□□□□ 0.25
SSU72P1-201ENST00000449911 WRNQ14191 1432 aaPredicted RBP eCLIP16.61■□□□□ 0.25
SSU72P1-201ENST00000449911 EIF4G3O43432 1585 aaKnown RBP16.6■□□□□ 0.25
SSU72P1-201ENST00000449911 RAD54L2Q9Y4B4 1467 aa16.59■□□□□ 0.25
SSU72P1-201ENST00000449911 DNAJC5Q9H3Z4 198 aa16.58■□□□□ 0.24
SSU72P1-201ENST00000449911 WDR97A6NE52 1622 aa16.56■□□□□ 0.24
SSU72P1-201ENST00000449911 TOP2BQ02880 1626 aa16.56■□□□□ 0.24
SSU72P1-201ENST00000449911 C1QBPQ07021 282 aaKnown RBP16.55■□□□□ 0.24
SSU72P1-201ENST00000449911 BIVM-ERCC5R4GMW8 1640 aa16.55■□□□□ 0.24
SSU72P1-201ENST00000449911 SYNJ1O43426 1573 aa16.53■□□□□ 0.24
SSU72P1-201ENST00000449911 AQRO60306 1485 aaKnown RBP eCLIP16.53■□□□□ 0.24
SSU72P1-201ENST00000449911 TDRD9Q8NDG6 1382 aaKnown RBP16.51■□□□□ 0.23
SSU72P1-201ENST00000449911 ABCA10Q8WWZ4 1543 aa16.49■□□□□ 0.23
SSU72P1-201ENST00000449911 KCNA4P22459 653 aa16.46■□□□□ 0.23
SSU72P1-201ENST00000449911 GRIN2BQ13224 1484 aa16.44■□□□□ 0.22
SSU72P1-201ENST00000449911 GAPVD1Q14C86 1478 aa16.43■□□□□ 0.22
SSU72P1-201ENST00000449911 OSCARQ8IYS5 282 aa16.43■□□□□ 0.22
SSU72P1-201ENST00000449911 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.43■□□□□ 0.22
SSU72P1-201ENST00000449911 SNAPC4Q5SXM2 1469 aa16.42■□□□□ 0.22
SSU72P1-201ENST00000449911 ABCA5Q8WWZ7 1642 aa16.41■□□□□ 0.22
SSU72P1-201ENST00000449911 MAGI1Q96QZ7 1491 aaPredicted RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms