RNA–Protein interactions for RNA: ENST00000446593.1

LINC01880-201, Transcript of long intergenic non-protein coding RNA 1880, humanhuman

TSL 4 BASIC

Gene LINC01880, Length 561 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01880-201ENST00000446593 AEBP2Q6ZN18 517 aaPredicted RBP18■□□□□ 0.47
LINC01880-201ENST00000446593 CHIC1Q5VXU3 224 aa16.88■□□□□ 0.29
LINC01880-201ENST00000446593 SENP3Q9H4L4 574 aaPredicted RBP15.56■□□□□ 0.08
LINC01880-201ENST00000446593 PHF23Q9BUL5 403 aaPredicted RBP15.2■□□□□ 0.02
LINC01880-201ENST00000446593 POTEDQ86YR6 584 aa15.07■□□□□ 0
LINC01880-201ENST00000446593 NISCHQ9Y2I1 1504 aa14.71□□□□□ -0.05
LINC01880-201ENST00000446593 FOXD1Q16676 465 aa14.56□□□□□ -0.08
LINC01880-201ENST00000446593 MSH5O43196 834 aa14.01□□□□□ -0.17
LINC01880-201ENST00000446593 ABCC9O60706 1549 aa13.64□□□□□ -0.23
LINC01880-201ENST00000446593 PIAS4Q8N2W9 510 aaPredicted RBP13.41□□□□□ -0.26
LINC01880-201ENST00000446593 CCDC180Q9P1Z9 1646 aa13.23□□□□□ -0.29
LINC01880-201ENST00000446593 DNAJC5BQ9UF47 199 aa13.1□□□□□ -0.31
LINC01880-201ENST00000446593 PPP6R1Q9UPN7 881 aa12.93□□□□□ -0.34
LINC01880-201ENST00000446593 ADRA2BP18089 450 aa12.85□□□□□ -0.35
LINC01880-201ENST00000446593 RB1CC1Q8TDY2 1594 aa12.83□□□□□ -0.36
LINC01880-201ENST00000446593 DCAF8L2P0C7V8 631 aa12.73□□□□□ -0.37
LINC01880-201ENST00000446593 PABPN1Q86U42 306 aaKnown RBP eCLIP12.73□□□□□ -0.37
LINC01880-201ENST00000446593 NACADO15069 1562 aa12.68□□□□□ -0.38
LINC01880-201ENST00000446593 PLPPR3Q6T4P5 718 aa12.67□□□□□ -0.38
LINC01880-201ENST00000446593 CACNB1Q02641 598 aaPredicted RBP12.52□□□□□ -0.41
LINC01880-201ENST00000446593 MYO15BQ96JP2 1530 aa12.42□□□□□ -0.42
LINC01880-201ENST00000446593 BICRAQ9NZM4 1560 aa12.39□□□□□ -0.43
LINC01880-201ENST00000446593 CECR2Q9BXF3 1484 aa12.34□□□□□ -0.43
LINC01880-201ENST00000446593 UNC13AQ9UPW8 1703 aa12.32□□□□□ -0.44
LINC01880-201ENST00000446593 DNAJC5Q9H3Z4 198 aa12.31□□□□□ -0.44
LINC01880-201ENST00000446593 SHROOM4Q9ULL8 1493 aa12.28□□□□□ -0.44
LINC01880-201ENST00000446593 CC2D2AQ9P2K1 1620 aa12.25□□□□□ -0.45
LINC01880-201ENST00000446593 DMRT2Q9Y5R5 561 aa12.19□□□□□ -0.46
LINC01880-201ENST00000446593 EIF4G1Q04637 1599 aaKnown RBP12.16□□□□□ -0.46
LINC01880-201ENST00000446593 DCAF1Q9Y4B6 1507 aa12.13□□□□□ -0.47
LINC01880-201ENST00000446593 ZCCHC6Q5VYS8 1495 aaKnown RBP12.1□□□□□ -0.47
LINC01880-201ENST00000446593 SCRIBQ14160 1630 aa12.08□□□□□ -0.48
LINC01880-201ENST00000446593 MAPK8IP2Q13387 824 aaPredicted RBP12.05□□□□□ -0.48
LINC01880-201ENST00000446593 CUX2O14529 1486 aa11.89□□□□□ -0.51
LINC01880-201ENST00000446593 SCAF1Q9H7N4 1312 aaKnown RBP11.85□□□□□ -0.51
LINC01880-201ENST00000446593 ERCC6Q03468 1493 aa11.84□□□□□ -0.51
LINC01880-201ENST00000446593 RNF39Q9H2S5 420 aa11.84□□□□□ -0.51
LINC01880-201ENST00000446593 NCAPD3P42695 1498 aa11.76□□□□□ -0.53
LINC01880-201ENST00000446593 DCAF8L1A6NGE4 600 aa11.71□□□□□ -0.53
LINC01880-201ENST00000446593 C1QBPQ07021 282 aaKnown RBP11.66□□□□□ -0.54
LINC01880-201ENST00000446593 ATAD2BQ9ULI0 1458 aa11.65□□□□□ -0.54
LINC01880-201ENST00000446593 POTEHQ6S545 545 aa11.65□□□□□ -0.54
LINC01880-201ENST00000446593 TRIM41Q8WV44 630 aa11.65□□□□□ -0.54
LINC01880-201ENST00000446593 NESP48681 1621 aa11.6□□□□□ -0.55
LINC01880-201ENST00000446593 SMARCA2P51531 1590 aa11.59□□□□□ -0.55
LINC01880-201ENST00000446593 HMGXB3Q12766 1538 aa11.57□□□□□ -0.56
LINC01880-201ENST00000446593 BAZ1BQ9UIG0 1483 aaKnown RBP11.53□□□□□ -0.56
LINC01880-201ENST00000446593 PDS5BQ9NTI5 1447 aa11.52□□□□□ -0.56
LINC01880-201ENST00000446593 SMARCA4P51532 1647 aa11.49□□□□□ -0.57
LINC01880-201ENST00000446593 LAMC3Q9Y6N6 1575 aa11.47□□□□□ -0.57
LINC01880-201ENST00000446593 THOC2Q8NI27 1593 aaKnown RBP11.46□□□□□ -0.57
LINC01880-201ENST00000446593 BAZ1AQ9NRL2 1556 aaPredicted RBP11.44□□□□□ -0.58
LINC01880-201ENST00000446593 OSCARQ8IYS5 282 aa11.42□□□□□ -0.58
LINC01880-201ENST00000446593 CADPSQ9ULU8 1353 aa11.41□□□□□ -0.58
LINC01880-201ENST00000446593 HOXD11P31277 338 aaPredicted RBP11.41□□□□□ -0.58
LINC01880-201ENST00000446593 PEG3Q9GZU2 1588 aa11.39□□□□□ -0.59
LINC01880-201ENST00000446593 MRC2Q9UBG0 1479 aa11.37□□□□□ -0.59
LINC01880-201ENST00000446593 KIF21AQ7Z4S6 1674 aa11.32□□□□□ -0.6
LINC01880-201ENST00000446593 WDR62O43379 1518 aa11.31□□□□□ -0.6
LINC01880-201ENST00000446593 MROH2BQ7Z745 1585 aa11.31□□□□□ -0.6
LINC01880-201ENST00000446593 CEP164Q9UPV0 1460 aa11.27□□□□□ -0.6
LINC01880-201ENST00000446593 FANCD2Q9BXW9 1451 aa11.24□□□□□ -0.61
LINC01880-201ENST00000446593 CFTRP13569 1480 aa11.18□□□□□ -0.62
LINC01880-201ENST00000446593 CYB5RLQ6IPT4 315 aa11.16□□□□□ -0.62
LINC01880-201ENST00000446593 TRHP20396 242 aaPredicted RBP11.15□□□□□ -0.62
LINC01880-201ENST00000446593 URB2Q14146 1524 aaKnown RBP11.12□□□□□ -0.63
LINC01880-201ENST00000446593 WIZO95785 1651 aa11.11□□□□□ -0.63
LINC01880-201ENST00000446593 RNF216Q9NWF9 866 aaPredicted RBP11.1□□□□□ -0.63
LINC01880-201ENST00000446593 RIMBP3CA6NJZ7 1639 aa11.09□□□□□ -0.63
LINC01880-201ENST00000446593 RIMBP3BA6NNM3 1639 aa11.09□□□□□ -0.63
LINC01880-201ENST00000446593 RIMBP3Q9UFD9 1639 aa11.09□□□□□ -0.63
LINC01880-201ENST00000446593 ARHGEF11O15085 1522 aa11.09□□□□□ -0.63
LINC01880-201ENST00000446593 IFT140Q96RY7 1462 aa11.07□□□□□ -0.64
LINC01880-201ENST00000446593 ZNF608Q9ULD9 1512 aaPredicted RBP11.04□□□□□ -0.64
LINC01880-201ENST00000446593 FBLN2P98095 1184 aa11.04□□□□□ -0.64
LINC01880-201ENST00000446593 RSF1Q96T23 1441 aaPredicted RBP11.02□□□□□ -0.64
LINC01880-201ENST00000446593 TOP2AP11388 1531 aaKnown RBP10.99□□□□□ -0.65
LINC01880-201ENST00000446593 CNKSR2Q8WXI2 1034 aa10.99□□□□□ -0.65
LINC01880-201ENST00000446593 ABCC8Q09428 1581 aa10.99□□□□□ -0.65
LINC01880-201ENST00000446593 PPP4R3CPQ6ZMV5 832 aa10.98□□□□□ -0.65
LINC01880-201ENST00000446593 TOPBP1Q92547 1522 aa10.96□□□□□ -0.65
LINC01880-201ENST00000446593 AQRO60306 1485 aaKnown RBP eCLIP10.96□□□□□ -0.65
LINC01880-201ENST00000446593 ARAP1Q96P48 1450 aa10.95□□□□□ -0.66
LINC01880-201ENST00000446593 CCDC88BA6NC98 1476 aa10.93□□□□□ -0.66
LINC01880-201ENST00000446593 CHMP7Q8WUX9 453 aaPredicted RBP10.91□□□□□ -0.66
LINC01880-201ENST00000446593 EIF4G3O43432 1585 aaKnown RBP10.9□□□□□ -0.67
LINC01880-201ENST00000446593 DNMBPQ6XZF7 1577 aa10.87□□□□□ -0.67
LINC01880-201ENST00000446593 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.87□□□□□ -0.67
LINC01880-201ENST00000446593 TDRD9Q8NDG6 1382 aaKnown RBP10.87□□□□□ -0.67
LINC01880-201ENST00000446593 SOGA1O94964 1423 aa10.85□□□□□ -0.67
LINC01880-201ENST00000446593 POLA1P09884 1462 aaPredicted RBP10.83□□□□□ -0.68
LINC01880-201ENST00000446593 TARBP1Q13395 1621 aaKnown RBP10.83□□□□□ -0.68
LINC01880-201ENST00000446593 RAD54L2Q9Y4B4 1467 aa10.81□□□□□ -0.68
LINC01880-201ENST00000446593 CHD1O14646 1710 aa10.81□□□□□ -0.68
LINC01880-201ENST00000446593 PRDM2Q13029 1718 aa10.81□□□□□ -0.68
LINC01880-201ENST00000446593 DSG3P32926 999 aa10.8□□□□□ -0.68
LINC01880-201ENST00000446593 SNAPC4Q5SXM2 1469 aa10.8□□□□□ -0.68
LINC01880-201ENST00000446593 SYNJ1O43426 1573 aa10.77□□□□□ -0.68
LINC01880-201ENST00000446593 MAGI1Q96QZ7 1491 aaPredicted RBP10.77□□□□□ -0.69
LINC01880-201ENST00000446593 CLASP1Q7Z460 1538 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms