RNA–Protein interactions for RNA: ENST00000444341.1

SATB1-206, Transcript of SATB homeobox 1, humanhuman

TSL 4

Gene SATB1, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-206ENST00000444341 AEBP2Q6ZN18 517 aaPredicted RBP25.66■■□□□ 1.7
SATB1-206ENST00000444341 CHIC1Q5VXU3 224 aa23.9■■□□□ 1.42
SATB1-206ENST00000444341 SENP3Q9H4L4 574 aaPredicted RBP21.7■■□□□ 1.06
SATB1-206ENST00000444341 PHF23Q9BUL5 403 aaPredicted RBP21.47■■□□□ 1.03
SATB1-206ENST00000444341 FOXD1Q16676 465 aa20.42■□□□□ 0.86
SATB1-206ENST00000444341 NISCHQ9Y2I1 1504 aa19.42■□□□□ 0.7
SATB1-206ENST00000444341 POTEDQ86YR6 584 aa19.31■□□□□ 0.68
SATB1-206ENST00000444341 MSH5O43196 834 aa19.04■□□□□ 0.64
SATB1-206ENST00000444341 PPP6R1Q9UPN7 881 aa18.93■□□□□ 0.62
SATB1-206ENST00000444341 PIAS4Q8N2W9 510 aaPredicted RBP18.89■□□□□ 0.61
SATB1-206ENST00000444341 PLPPR3Q6T4P5 718 aa18.85■□□□□ 0.61
SATB1-206ENST00000444341 ADRA2BP18089 450 aa18.78■□□□□ 0.6
SATB1-206ENST00000444341 ABCC9O60706 1549 aa18.13■□□□□ 0.49
SATB1-206ENST00000444341 CCDC180Q9P1Z9 1646 aa17.68■□□□□ 0.42
SATB1-206ENST00000444341 DNAJC5BQ9UF47 199 aa17.5■□□□□ 0.39
SATB1-206ENST00000444341 MAPK8IP2Q13387 824 aaPredicted RBP17.4■□□□□ 0.38
SATB1-206ENST00000444341 DMRT2Q9Y5R5 561 aa17.23■□□□□ 0.35
SATB1-206ENST00000444341 RB1CC1Q8TDY2 1594 aa17.06■□□□□ 0.32
SATB1-206ENST00000444341 SCAF1Q9H7N4 1312 aaKnown RBP16.92■□□□□ 0.3
SATB1-206ENST00000444341 NACADO15069 1562 aa16.82■□□□□ 0.28
SATB1-206ENST00000444341 PABPN1Q86U42 306 aaKnown RBP eCLIP16.78■□□□□ 0.28
SATB1-206ENST00000444341 UNC13AQ9UPW8 1703 aa16.73■□□□□ 0.27
SATB1-206ENST00000444341 BICRAQ9NZM4 1560 aa16.6■□□□□ 0.25
SATB1-206ENST00000444341 CACNB1Q02641 598 aaPredicted RBP16.57■□□□□ 0.24
SATB1-206ENST00000444341 PPP4R3CPQ6ZMV5 832 aa16.55■□□□□ 0.24
SATB1-206ENST00000444341 DCAF8L2P0C7V8 631 aa16.54■□□□□ 0.24
SATB1-206ENST00000444341 HOXD11P31277 338 aaPredicted RBP16.48■□□□□ 0.23
SATB1-206ENST00000444341 DCAF8L1A6NGE4 600 aa16.45■□□□□ 0.22
SATB1-206ENST00000444341 DNAJC5Q9H3Z4 198 aa16.45■□□□□ 0.22
SATB1-206ENST00000444341 MYO15BQ96JP2 1530 aa16.44■□□□□ 0.22
SATB1-206ENST00000444341 CECR2Q9BXF3 1484 aa16.41■□□□□ 0.22
SATB1-206ENST00000444341 CC2D2AQ9P2K1 1620 aa16.38■□□□□ 0.21
SATB1-206ENST00000444341 RNF39Q9H2S5 420 aa16.34■□□□□ 0.21
SATB1-206ENST00000444341 SHROOM4Q9ULL8 1493 aa16.32■□□□□ 0.2
SATB1-206ENST00000444341 CNKSR2Q8WXI2 1034 aa16.25■□□□□ 0.19
SATB1-206ENST00000444341 EIF4G1Q04637 1599 aaKnown RBP16.22■□□□□ 0.19
SATB1-206ENST00000444341 RNF216Q9NWF9 866 aaPredicted RBP16.21■□□□□ 0.19
SATB1-206ENST00000444341 SCRIBQ14160 1630 aa16.04■□□□□ 0.16
SATB1-206ENST00000444341 DCAF1Q9Y4B6 1507 aa16.03■□□□□ 0.16
SATB1-206ENST00000444341 C1QBPQ07021 282 aaKnown RBP15.99■□□□□ 0.15
SATB1-206ENST00000444341 ZCCHC6Q5VYS8 1495 aaKnown RBP15.98■□□□□ 0.15
SATB1-206ENST00000444341 CUX2O14529 1486 aa15.87■□□□□ 0.13
SATB1-206ENST00000444341 ERCC6Q03468 1493 aa15.68■□□□□ 0.1
SATB1-206ENST00000444341 NCBP3Q53F19 620 aaKnown RBP15.65■□□□□ 0.1
SATB1-206ENST00000444341 NPM3O75607 178 aaKnown RBP15.63■□□□□ 0.09
SATB1-206ENST00000444341 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.59■□□□□ 0.09
SATB1-206ENST00000444341 NCAPD3P42695 1498 aa15.53■□□□□ 0.08
SATB1-206ENST00000444341 TRIM41Q8WV44 630 aa15.46■□□□□ 0.07
SATB1-206ENST00000444341 NESP48681 1621 aa15.45■□□□□ 0.06
SATB1-206ENST00000444341 THOC2Q8NI27 1593 aaKnown RBP15.42■□□□□ 0.06
SATB1-206ENST00000444341 ATAD2BQ9ULI0 1458 aa15.4■□□□□ 0.06
SATB1-206ENST00000444341 HMGXB3Q12766 1538 aa15.38■□□□□ 0.05
SATB1-206ENST00000444341 U3KPZ7 1027 aaPredicted RBP15.37■□□□□ 0.05
SATB1-206ENST00000444341 SMARCA2P51531 1590 aa15.33■□□□□ 0.05
SATB1-206ENST00000444341 SPINK5Q9NQ38 1064 aaPredicted RBP15.27■□□□□ 0.04
SATB1-206ENST00000444341 SMARCA4P51532 1647 aa15.27■□□□□ 0.03
SATB1-206ENST00000444341 LAMC3Q9Y6N6 1575 aa15.27■□□□□ 0.03
SATB1-206ENST00000444341 KIF21AQ7Z4S6 1674 aa15.25■□□□□ 0.03
SATB1-206ENST00000444341 BAZ1BQ9UIG0 1483 aaKnown RBP15.21■□□□□ 0.03
SATB1-206ENST00000444341 DSG3P32926 999 aa15.21■□□□□ 0.03
SATB1-206ENST00000444341 PDS5BQ9NTI5 1447 aa15.17■□□□□ 0.02
SATB1-206ENST00000444341 PEG3Q9GZU2 1588 aa15.15■□□□□ 0.02
SATB1-206ENST00000444341 CAPN15O75808 1086 aa15.12■□□□□ 0.01
SATB1-206ENST00000444341 BAZ1AQ9NRL2 1556 aaPredicted RBP15.11■□□□□ 0.01
SATB1-206ENST00000444341 SLC4A2P04920 1241 aa15.09■□□□□ 0.01
SATB1-206ENST00000444341 MRC2Q9UBG0 1479 aa15.08■□□□□ 0.01
SATB1-206ENST00000444341 WDR62O43379 1518 aa15.08■□□□□ 0.01
SATB1-206ENST00000444341 KCNA4P22459 653 aa15.08■□□□□ 0
SATB1-206ENST00000444341 OSCARQ8IYS5 282 aa15.03■□□□□ -0
SATB1-206ENST00000444341 CADPSQ9ULU8 1353 aa15.02■□□□□ -0
SATB1-206ENST00000444341 POTEHQ6S545 545 aa15.02■□□□□ -0
SATB1-206ENST00000444341 MROH2BQ7Z745 1585 aa14.95□□□□□ -0.02
SATB1-206ENST00000444341 RIMBP3CA6NJZ7 1639 aa14.93□□□□□ -0.02
SATB1-206ENST00000444341 RIMBP3BA6NNM3 1639 aa14.93□□□□□ -0.02
SATB1-206ENST00000444341 RIMBP3Q9UFD9 1639 aa14.93□□□□□ -0.02
SATB1-206ENST00000444341 CEP164Q9UPV0 1460 aa14.91□□□□□ -0.02
SATB1-206ENST00000444341 FANCD2Q9BXW9 1451 aa14.85□□□□□ -0.03
SATB1-206ENST00000444341 ABCB7O75027 752 aa14.82□□□□□ -0.04
SATB1-206ENST00000444341 TRHP20396 242 aaPredicted RBP14.82□□□□□ -0.04
SATB1-206ENST00000444341 ARHGEF11O15085 1522 aa14.82□□□□□ -0.04
SATB1-206ENST00000444341 URB2Q14146 1524 aaKnown RBP14.77□□□□□ -0.04
SATB1-206ENST00000444341 WIZO95785 1651 aa14.76□□□□□ -0.05
SATB1-206ENST00000444341 CFTRP13569 1480 aa14.76□□□□□ -0.05
SATB1-206ENST00000444341 CYB5RLQ6IPT4 315 aa14.7□□□□□ -0.06
SATB1-206ENST00000444341 ZNF219Q9P2Y4 722 aaPredicted RBP14.69□□□□□ -0.06
SATB1-206ENST00000444341 ZNF608Q9ULD9 1512 aaPredicted RBP14.67□□□□□ -0.06
SATB1-206ENST00000444341 ARAP1Q96P48 1450 aa14.63□□□□□ -0.07
SATB1-206ENST00000444341 IFT140Q96RY7 1462 aa14.63□□□□□ -0.07
SATB1-206ENST00000444341 PRDM2Q13029 1718 aa14.61□□□□□ -0.07
SATB1-206ENST00000444341 APLP2Q06481 763 aa14.59□□□□□ -0.07
SATB1-206ENST00000444341 CHD1O14646 1710 aa14.58□□□□□ -0.07
SATB1-206ENST00000444341 EIF4G3O43432 1585 aaKnown RBP14.57□□□□□ -0.08
SATB1-206ENST00000444341 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.57□□□□□ -0.08
SATB1-206ENST00000444341 HNRNPUL2Q1KMD3 747 aaKnown RBP14.57□□□□□ -0.08
SATB1-206ENST00000444341 RSF1Q96T23 1441 aaPredicted RBP14.56□□□□□ -0.08
SATB1-206ENST00000444341 TOP2AP11388 1531 aaKnown RBP14.53□□□□□ -0.08
SATB1-206ENST00000444341 SAMD1Q6SPF0 538 aaPredicted RBP14.53□□□□□ -0.08
SATB1-206ENST00000444341 TOPBP1Q92547 1522 aa14.52□□□□□ -0.08
SATB1-206ENST00000444341 AQRO60306 1485 aaKnown RBP eCLIP14.46□□□□□ -0.09
SATB1-206ENST00000444341 TARBP1Q13395 1621 aaKnown RBP14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms