RNA–Protein interactions for RNA: ENST00000442825.6

CLNK-202, Transcript of cytokine dependent hematopoietic cell linker, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CLNK, Length 1,539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNK-202ENST00000442825 AEBP2Q6ZN18 517 aaPredicted RBP22.89■■□□□ 1.26
CLNK-202ENST00000442825 NISCHQ9Y2I1 1504 aa22.32■■□□□ 1.16
CLNK-202ENST00000442825 CHIC1Q5VXU3 224 aa21.37■■□□□ 1.01
CLNK-202ENST00000442825 SENP3Q9H4L4 574 aaPredicted RBP19.67■□□□□ 0.74
CLNK-202ENST00000442825 CCDC180Q9P1Z9 1646 aa19.57■□□□□ 0.72
CLNK-202ENST00000442825 PHF23Q9BUL5 403 aaPredicted RBP19.3■□□□□ 0.68
CLNK-202ENST00000442825 ABCC9O60706 1549 aa18.96■□□□□ 0.63
CLNK-202ENST00000442825 POTEDQ86YR6 584 aa18.78■□□□□ 0.6
CLNK-202ENST00000442825 ZCCHC6Q5VYS8 1495 aaKnown RBP18.66■□□□□ 0.58
CLNK-202ENST00000442825 DCAF8L2P0C7V8 631 aa18.56■□□□□ 0.56
CLNK-202ENST00000442825 FOXD1Q16676 465 aa18.45■□□□□ 0.54
CLNK-202ENST00000442825 DCAF1Q9Y4B6 1507 aa18.43■□□□□ 0.54
CLNK-202ENST00000442825 MYO15BQ96JP2 1530 aa18.35■□□□□ 0.53
CLNK-202ENST00000442825 NACADO15069 1562 aa18.35■□□□□ 0.53
CLNK-202ENST00000442825 RB1CC1Q8TDY2 1594 aa18.27■□□□□ 0.52
CLNK-202ENST00000442825 SCRIBQ14160 1630 aa17.99■□□□□ 0.47
CLNK-202ENST00000442825 SHROOM4Q9ULL8 1493 aa17.95■□□□□ 0.46
CLNK-202ENST00000442825 UNC13AQ9UPW8 1703 aa17.9■□□□□ 0.46
CLNK-202ENST00000442825 PABPN1Q86U42 306 aaKnown RBP eCLIP17.83■□□□□ 0.45
CLNK-202ENST00000442825 BICRAQ9NZM4 1560 aa17.82■□□□□ 0.44
CLNK-202ENST00000442825 MSH5O43196 834 aa17.62■□□□□ 0.41
CLNK-202ENST00000442825 CECR2Q9BXF3 1484 aa17.43■□□□□ 0.38
CLNK-202ENST00000442825 EIF4G1Q04637 1599 aaKnown RBP17.27■□□□□ 0.35
CLNK-202ENST00000442825 MROH2BQ7Z745 1585 aa17.26■□□□□ 0.35
CLNK-202ENST00000442825 BAZ1AQ9NRL2 1556 aaPredicted RBP17.22■□□□□ 0.35
CLNK-202ENST00000442825 SMARCA4P51532 1647 aa17.21■□□□□ 0.35
CLNK-202ENST00000442825 DNAJC5BQ9UF47 199 aa17.2■□□□□ 0.34
CLNK-202ENST00000442825 RSF1Q96T23 1441 aaPredicted RBP17.18■□□□□ 0.34
CLNK-202ENST00000442825 CC2D2AQ9P2K1 1620 aa17.11■□□□□ 0.33
CLNK-202ENST00000442825 ATAD2BQ9ULI0 1458 aa17.08■□□□□ 0.32
CLNK-202ENST00000442825 SUPT5HO00267 1087 aaKnown RBP17.06■□□□□ 0.32
CLNK-202ENST00000442825 WIZO95785 1651 aa17.06■□□□□ 0.32
CLNK-202ENST00000442825 PEG3Q9GZU2 1588 aa17.03■□□□□ 0.32
CLNK-202ENST00000442825 PIAS4Q8N2W9 510 aaPredicted RBP17.01■□□□□ 0.31
CLNK-202ENST00000442825 NCAPD3P42695 1498 aa16.99■□□□□ 0.31
CLNK-202ENST00000442825 SMARCA2P51531 1590 aa16.98■□□□□ 0.31
CLNK-202ENST00000442825 BAZ1BQ9UIG0 1483 aaKnown RBP16.9■□□□□ 0.3
CLNK-202ENST00000442825 HMGXB3Q12766 1538 aa16.89■□□□□ 0.29
CLNK-202ENST00000442825 TOP2AP11388 1531 aaKnown RBP16.85■□□□□ 0.29
CLNK-202ENST00000442825 CCDC88BA6NC98 1476 aa16.72■□□□□ 0.27
CLNK-202ENST00000442825 PPP6R1Q9UPN7 881 aa16.55■□□□□ 0.24
CLNK-202ENST00000442825 NESP48681 1621 aa16.54■□□□□ 0.24
CLNK-202ENST00000442825 CADPSQ9ULU8 1353 aa16.53■□□□□ 0.24
CLNK-202ENST00000442825 CFTRP13569 1480 aa16.49■□□□□ 0.23
CLNK-202ENST00000442825 ADRA2BP18089 450 aa16.44■□□□□ 0.22
CLNK-202ENST00000442825 LAMC3Q9Y6N6 1575 aa16.42■□□□□ 0.22
CLNK-202ENST00000442825 FANCD2Q9BXW9 1451 aa16.32■□□□□ 0.2
CLNK-202ENST00000442825 PDS5BQ9NTI5 1447 aa16.32■□□□□ 0.2
CLNK-202ENST00000442825 PRDM2Q13029 1718 aa16.26■□□□□ 0.19
CLNK-202ENST00000442825 KIF21AQ7Z4S6 1674 aa16.26■□□□□ 0.19
CLNK-202ENST00000442825 PLPPR3Q6T4P5 718 aa16.24■□□□□ 0.19
CLNK-202ENST00000442825 CEP164Q9UPV0 1460 aa16.23■□□□□ 0.19
CLNK-202ENST00000442825 ERCC6Q03468 1493 aa16.22■□□□□ 0.19
CLNK-202ENST00000442825 ABCC8Q09428 1581 aa16.22■□□□□ 0.19
CLNK-202ENST00000442825 URB2Q14146 1524 aaKnown RBP16.18■□□□□ 0.18
CLNK-202ENST00000442825 WRNQ14191 1432 aaPredicted RBP eCLIP16.15■□□□□ 0.18
CLNK-202ENST00000442825 CUX1P39880 1505 aa16.15■□□□□ 0.18
CLNK-202ENST00000442825 MRC2Q9UBG0 1479 aa16.15■□□□□ 0.18
CLNK-202ENST00000442825 THOC2Q8NI27 1593 aaKnown RBP16.13■□□□□ 0.17
CLNK-202ENST00000442825 SYNJ1O43426 1573 aa16.12■□□□□ 0.17
CLNK-202ENST00000442825 TOPBP1Q92547 1522 aa16.11■□□□□ 0.17
CLNK-202ENST00000442825 DNMBPQ6XZF7 1577 aa16.08■□□□□ 0.16
CLNK-202ENST00000442825 WDR62O43379 1518 aa16.08■□□□□ 0.16
CLNK-202ENST00000442825 TOP2BQ02880 1626 aa16.05■□□□□ 0.16
CLNK-202ENST00000442825 TRIM41Q8WV44 630 aa16.03■□□□□ 0.16
CLNK-202ENST00000442825 BIVM-ERCC5R4GMW8 1640 aa16.03■□□□□ 0.16
CLNK-202ENST00000442825 FGD5Q6ZNL6 1462 aa16.02■□□□□ 0.15
CLNK-202ENST00000442825 POLA1P09884 1462 aaPredicted RBP16.01■□□□□ 0.15
CLNK-202ENST00000442825 CUX2O14529 1486 aa16■□□□□ 0.15
CLNK-202ENST00000442825 RAD54L2Q9Y4B4 1467 aa15.98■□□□□ 0.15
CLNK-202ENST00000442825 SOGA1O94964 1423 aa15.95■□□□□ 0.14
CLNK-202ENST00000442825 TARBP1Q13395 1621 aaKnown RBP15.9■□□□□ 0.14
CLNK-202ENST00000442825 IFT140Q96RY7 1462 aa15.88■□□□□ 0.13
CLNK-202ENST00000442825 ZNF608Q9ULD9 1512 aaPredicted RBP15.87■□□□□ 0.13
CLNK-202ENST00000442825 TDRD9Q8NDG6 1382 aaKnown RBP15.86■□□□□ 0.13
CLNK-202ENST00000442825 RUSC2Q8N2Y8 1516 aa15.86■□□□□ 0.13
CLNK-202ENST00000442825 ABCA10Q8WWZ4 1543 aa15.86■□□□□ 0.13
CLNK-202ENST00000442825 AQRO60306 1485 aaKnown RBP eCLIP15.83■□□□□ 0.12
CLNK-202ENST00000442825 WDR97A6NE52 1622 aa15.82■□□□□ 0.12
CLNK-202ENST00000442825 FAM9AQ8IZU1 332 aaPredicted RBP15.77■□□□□ 0.11
CLNK-202ENST00000442825 KIF27Q86VH2 1401 aa15.75■□□□□ 0.11
CLNK-202ENST00000442825 ABCA5Q8WWZ7 1642 aa15.75■□□□□ 0.11
CLNK-202ENST00000442825 GAPVD1Q14C86 1478 aa15.75■□□□□ 0.11
CLNK-202ENST00000442825 EIF4G3O43432 1585 aaKnown RBP15.74■□□□□ 0.11
CLNK-202ENST00000442825 IGF1RP08069 1367 aa15.73■□□□□ 0.11
CLNK-202ENST00000442825 CACNB1Q02641 598 aaPredicted RBP15.69■□□□□ 0.1
CLNK-202ENST00000442825 GRIN2BQ13224 1484 aa15.68■□□□□ 0.1
CLNK-202ENST00000442825 CSRNP3Q8WYN3 585 aa15.68■□□□□ 0.1
CLNK-202ENST00000442825 EEA1Q15075 1411 aa15.66■□□□□ 0.1
CLNK-202ENST00000442825 SNAPC4Q5SXM2 1469 aa15.64■□□□□ 0.09
CLNK-202ENST00000442825 ERICH3Q5RHP9 1530 aa15.64■□□□□ 0.09
CLNK-202ENST00000442825 PBRM1Q86U86 1689 aa15.63■□□□□ 0.09
CLNK-202ENST00000442825 CARMIL1Q5VZK9 1371 aa15.61■□□□□ 0.09
CLNK-202ENST00000442825 PRXQ9BXM0 1461 aa15.6■□□□□ 0.09
CLNK-202ENST00000442825 MAGI1Q96QZ7 1491 aaPredicted RBP15.57■□□□□ 0.08
CLNK-202ENST00000442825 ADAMTS12P58397 1594 aa15.57■□□□□ 0.08
CLNK-202ENST00000442825 EHMT2Q96KQ7 1210 aa15.57■□□□□ 0.08
CLNK-202ENST00000442825 FHAD1B1AJZ9 1412 aa15.57■□□□□ 0.08
CLNK-202ENST00000442825 RAPGEF2Q9Y4G8 1499 aa15.54■□□□□ 0.08
CLNK-202ENST00000442825 LOC105371045A0A1W2PR82 267 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms