RNA–Protein interactions for RNA: ENST00000442019.6

CAGE1-204, Transcript of cancer antigen 1, humanhuman

TSL 1 (best)

Gene CAGE1, Length 2,832 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAGE1-204ENST00000442019 NISCHQ9Y2I1 1504 aa14.07□□□□□ -0.16
CAGE1-204ENST00000442019 CCDC180Q9P1Z9 1646 aa12.84□□□□□ -0.35
CAGE1-204ENST00000442019 ABCC9O60706 1549 aa12.28□□□□□ -0.44
CAGE1-204ENST00000442019 RB1CC1Q8TDY2 1594 aa12.08□□□□□ -0.48
CAGE1-204ENST00000442019 MYO15BQ96JP2 1530 aa12.07□□□□□ -0.48
CAGE1-204ENST00000442019 NACADO15069 1562 aa12.05□□□□□ -0.48
CAGE1-204ENST00000442019 HRCP23327 699 aa12.04□□□□□ -0.48
CAGE1-204ENST00000442019 ZCCHC6Q5VYS8 1495 aaKnown RBP12□□□□□ -0.49
CAGE1-204ENST00000442019 SHROOM4Q9ULL8 1493 aa11.95□□□□□ -0.5
CAGE1-204ENST00000442019 SUPT5HO00267 1087 aaKnown RBP11.84□□□□□ -0.51
CAGE1-204ENST00000442019 DCAF1Q9Y4B6 1507 aa11.84□□□□□ -0.51
CAGE1-204ENST00000442019 CHIC1Q5VXU3 224 aa11.81□□□□□ -0.52
CAGE1-204ENST00000442019 UNC13AQ9UPW8 1703 aa11.75□□□□□ -0.53
CAGE1-204ENST00000442019 DNAJC5BQ9UF47 199 aa11.69□□□□□ -0.54
CAGE1-204ENST00000442019 PCGF6Q9BYE7 350 aa11.66□□□□□ -0.54
CAGE1-204ENST00000442019 PELP1Q8IZL8 1130 aaKnown RBP11.65□□□□□ -0.54
CAGE1-204ENST00000442019 BICRAQ9NZM4 1560 aa11.65□□□□□ -0.54
CAGE1-204ENST00000442019 ZEB1P37275 1124 aaPredicted RBP11.53□□□□□ -0.56
CAGE1-204ENST00000442019 TRIM26Q12899 539 aaPredicted RBP11.53□□□□□ -0.56
CAGE1-204ENST00000442019 PPARGC1BQ86YN6 1023 aaKnown RBP11.53□□□□□ -0.56
CAGE1-204ENST00000442019 CC2D2AQ9P2K1 1620 aa11.34□□□□□ -0.59
CAGE1-204ENST00000442019 EIF4G1Q04637 1599 aaKnown RBP11.33□□□□□ -0.6
CAGE1-204ENST00000442019 LOC105371045A0A1W2PR82 267 aa11.33□□□□□ -0.6
CAGE1-204ENST00000442019 MYT1Q01538 1121 aa11.26□□□□□ -0.61
CAGE1-204ENST00000442019 CECR2Q9BXF3 1484 aa11.25□□□□□ -0.61
CAGE1-204ENST00000442019 SCAF1Q9H7N4 1312 aaKnown RBP11.23□□□□□ -0.61
CAGE1-204ENST00000442019 RSF1Q96T23 1441 aaPredicted RBP11.19□□□□□ -0.62
CAGE1-204ENST00000442019 DCAF8L2P0C7V8 631 aa11.19□□□□□ -0.62
CAGE1-204ENST00000442019 PABPN1Q86U42 306 aaKnown RBP eCLIP11.17□□□□□ -0.62
CAGE1-204ENST00000442019 DNAJC5Q9H3Z4 198 aa11.14□□□□□ -0.63
CAGE1-204ENST00000442019 SCRIBQ14160 1630 aa11.14□□□□□ -0.63
CAGE1-204ENST00000442019 CUX2O14529 1486 aa11.12□□□□□ -0.63
CAGE1-204ENST00000442019 TRIM41Q8WV44 630 aa11.11□□□□□ -0.63
CAGE1-204ENST00000442019 ACIN1Q9UKV3 1341 aaKnown RBP11.08□□□□□ -0.64
CAGE1-204ENST00000442019 HMGXB3Q12766 1538 aa11.04□□□□□ -0.64
CAGE1-204ENST00000442019 NCAPD3P42695 1498 aa11.03□□□□□ -0.64
CAGE1-204ENST00000442019 CENPBP07199 599 aaPredicted RBP11.01□□□□□ -0.65
CAGE1-204ENST00000442019 PEG3Q9GZU2 1588 aa10.99□□□□□ -0.65
CAGE1-204ENST00000442019 WRNQ14191 1432 aaPredicted RBP eCLIP10.98□□□□□ -0.65
CAGE1-204ENST00000442019 SMARCA2P51531 1590 aa10.97□□□□□ -0.65
CAGE1-204ENST00000442019 NEUROD1Q13562 356 aa10.94□□□□□ -0.66
CAGE1-204ENST00000442019 BAZ1AQ9NRL2 1556 aaPredicted RBP10.94□□□□□ -0.66
CAGE1-204ENST00000442019 DIEXFQ68CQ4 756 aaKnown RBP10.9□□□□□ -0.66
CAGE1-204ENST00000442019 CCER1Q8TC90 406 aaPredicted RBP10.9□□□□□ -0.66
CAGE1-204ENST00000442019 MROH2BQ7Z745 1585 aa10.88□□□□□ -0.67
CAGE1-204ENST00000442019 GTF3C3Q9Y5Q9 886 aa10.88□□□□□ -0.67
CAGE1-204ENST00000442019 FAM9AQ8IZU1 332 aaPredicted RBP10.87□□□□□ -0.67
CAGE1-204ENST00000442019 LAMC3Q9Y6N6 1575 aa10.86□□□□□ -0.67
CAGE1-204ENST00000442019 SMARCA4P51532 1647 aa10.86□□□□□ -0.67
CAGE1-204ENST00000442019 WIZO95785 1651 aa10.85□□□□□ -0.67
CAGE1-204ENST00000442019 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.84□□□□□ -0.67
CAGE1-204ENST00000442019 EEA1Q15075 1411 aa10.83□□□□□ -0.68
CAGE1-204ENST00000442019 ATAD2BQ9ULI0 1458 aa10.83□□□□□ -0.68
CAGE1-204ENST00000442019 THOC2Q8NI27 1593 aaKnown RBP10.81□□□□□ -0.68
CAGE1-204ENST00000442019 TNIKQ9UKE5 1360 aa10.8□□□□□ -0.68
CAGE1-204ENST00000442019 TOP2AP11388 1531 aaKnown RBP10.79□□□□□ -0.68
CAGE1-204ENST00000442019 CEP162Q5TB80 1403 aa10.79□□□□□ -0.68
CAGE1-204ENST00000442019 ZNF316A6NFI3 1004 aaPredicted RBP10.78□□□□□ -0.68
CAGE1-204ENST00000442019 CLSPNQ9HAW4 1339 aa10.76□□□□□ -0.69
CAGE1-204ENST00000442019 ERCC6Q03468 1493 aa10.7□□□□□ -0.7
CAGE1-204ENST00000442019 GOLGA3Q08378 1498 aa10.69□□□□□ -0.7
CAGE1-204ENST00000442019 CCDC88BA6NC98 1476 aa10.69□□□□□ -0.7
CAGE1-204ENST00000442019 BAZ1BQ9UIG0 1483 aaKnown RBP10.67□□□□□ -0.7
CAGE1-204ENST00000442019 KIF21BO75037 1637 aa10.67□□□□□ -0.7
CAGE1-204ENST00000442019 ABCC8Q09428 1581 aa10.66□□□□□ -0.7
CAGE1-204ENST00000442019 WDR62O43379 1518 aa10.66□□□□□ -0.7
CAGE1-204ENST00000442019 EHMT2Q96KQ7 1210 aa10.65□□□□□ -0.71
CAGE1-204ENST00000442019 PDS5BQ9NTI5 1447 aa10.64□□□□□ -0.71
CAGE1-204ENST00000442019 PRDM2Q13029 1718 aa10.62□□□□□ -0.71
CAGE1-204ENST00000442019 KIF21AQ7Z4S6 1674 aa10.61□□□□□ -0.71
CAGE1-204ENST00000442019 SOGA1O94964 1423 aa10.61□□□□□ -0.71
CAGE1-204ENST00000442019 CEP164Q9UPV0 1460 aa10.61□□□□□ -0.71
CAGE1-204ENST00000442019 CSRNP3Q8WYN3 585 aa10.6□□□□□ -0.71
CAGE1-204ENST00000442019 MRC2Q9UBG0 1479 aa10.59□□□□□ -0.71
CAGE1-204ENST00000442019 TTBK1Q5TCY1 1321 aaPredicted RBP10.58□□□□□ -0.72
CAGE1-204ENST00000442019 MIER1Q8N108 512 aa10.57□□□□□ -0.72
CAGE1-204ENST00000442019 VPS8Q8N3P4 1428 aa10.56□□□□□ -0.72
CAGE1-204ENST00000442019 CADPSQ9ULU8 1353 aa10.53□□□□□ -0.72
CAGE1-204ENST00000442019 RUSC2Q8N2Y8 1516 aa10.52□□□□□ -0.73
CAGE1-204ENST00000442019 YTHDC1Q96MU7 727 aaKnown RBP10.52□□□□□ -0.73
CAGE1-204ENST00000442019 CLIP1P30622 1438 aa10.51□□□□□ -0.73
CAGE1-204ENST00000442019 NESP48681 1621 aa10.51□□□□□ -0.73
CAGE1-204ENST00000442019 UBTFP17480 764 aaKnown RBP10.49□□□□□ -0.73
CAGE1-204ENST00000442019 WDR97A6NE52 1622 aa10.49□□□□□ -0.73
CAGE1-204ENST00000442019 CFTRP13569 1480 aa10.47□□□□□ -0.73
CAGE1-204ENST00000442019 SYNJ1O43426 1573 aa10.46□□□□□ -0.73
CAGE1-204ENST00000442019 SUPT16HQ9Y5B9 1047 aaKnown RBP10.45□□□□□ -0.74
CAGE1-204ENST00000442019 ERICH3Q5RHP9 1530 aa10.44□□□□□ -0.74
CAGE1-204ENST00000442019 DHX57Q6P158 1386 aaKnown RBP10.43□□□□□ -0.74
CAGE1-204ENST00000442019 HNRNPUL2Q1KMD3 747 aaKnown RBP10.41□□□□□ -0.74
CAGE1-204ENST00000442019 APLP2Q06481 763 aa10.41□□□□□ -0.74
CAGE1-204ENST00000442019 ANP32EQ9BTT0 268 aa10.4□□□□□ -0.74
CAGE1-204ENST00000442019 RRBP1Q9P2E9 1410 aaKnown RBP10.4□□□□□ -0.74
CAGE1-204ENST00000442019 BIVM-ERCC5R4GMW8 1640 aa10.39□□□□□ -0.75
CAGE1-204ENST00000442019 TOP2BQ02880 1626 aa10.38□□□□□ -0.75
CAGE1-204ENST00000442019 RAPGEF2Q9Y4G8 1499 aa10.37□□□□□ -0.75
CAGE1-204ENST00000442019 FANCD2Q9BXW9 1451 aa10.37□□□□□ -0.75
CAGE1-204ENST00000442019 TSHZ2Q9NRE2 1034 aa10.37□□□□□ -0.75
CAGE1-204ENST00000442019 IFT140Q96RY7 1462 aa10.34□□□□□ -0.75
CAGE1-204ENST00000442019 ARAP1Q96P48 1450 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms