RNA–Protein interactions for RNA: ENST00000440093.6

SOX9-AS1-205, SOX9 antisense RNA 1, humanhuman

TSL 3

Gene SOX9-AS1, Length 468 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-205ENST00000440093 AEBP2Q6ZN18 517 aaPredicted RBP16.22■□□□□ 0.19
SOX9-AS1-205ENST00000440093 CHIC1Q5VXU3 224 aa15.3■□□□□ 0.04
SOX9-AS1-205ENST00000440093 SENP3Q9H4L4 574 aaPredicted RBP13.75□□□□□ -0.21
SOX9-AS1-205ENST00000440093 PHF23Q9BUL5 403 aaPredicted RBP13.63□□□□□ -0.23
SOX9-AS1-205ENST00000440093 FOXD1Q16676 465 aa12.89□□□□□ -0.35
SOX9-AS1-205ENST00000440093 NISCHQ9Y2I1 1504 aa12.76□□□□□ -0.37
SOX9-AS1-205ENST00000440093 PLPPR3Q6T4P5 718 aa12.17□□□□□ -0.46
SOX9-AS1-205ENST00000440093 PPP6R1Q9UPN7 881 aa12.07□□□□□ -0.48
SOX9-AS1-205ENST00000440093 ADRA2BP18089 450 aa12.01□□□□□ -0.49
SOX9-AS1-205ENST00000440093 PIAS4Q8N2W9 510 aaPredicted RBP12.01□□□□□ -0.49
SOX9-AS1-205ENST00000440093 ABCC9O60706 1549 aa12.01□□□□□ -0.49
SOX9-AS1-205ENST00000440093 MSH5O43196 834 aa12□□□□□ -0.49
SOX9-AS1-205ENST00000440093 POTEDQ86YR6 584 aa11.87□□□□□ -0.51
SOX9-AS1-205ENST00000440093 CCDC180Q9P1Z9 1646 aa11.66□□□□□ -0.54
SOX9-AS1-205ENST00000440093 DNAJC5BQ9UF47 199 aa11.57□□□□□ -0.56
SOX9-AS1-205ENST00000440093 RB1CC1Q8TDY2 1594 aa11.23□□□□□ -0.61
SOX9-AS1-205ENST00000440093 UNC13AQ9UPW8 1703 aa11.12□□□□□ -0.63
SOX9-AS1-205ENST00000440093 MAPK8IP2Q13387 824 aaPredicted RBP11.07□□□□□ -0.64
SOX9-AS1-205ENST00000440093 PABPN1Q86U42 306 aaKnown RBP eCLIP11.05□□□□□ -0.64
SOX9-AS1-205ENST00000440093 NACADO15069 1562 aa11.03□□□□□ -0.64
SOX9-AS1-205ENST00000440093 BICRAQ9NZM4 1560 aa11.01□□□□□ -0.65
SOX9-AS1-205ENST00000440093 DMRT2Q9Y5R5 561 aa10.92□□□□□ -0.66
SOX9-AS1-205ENST00000440093 SCAF1Q9H7N4 1312 aaKnown RBP10.88□□□□□ -0.67
SOX9-AS1-205ENST00000440093 CC2D2AQ9P2K1 1620 aa10.84□□□□□ -0.67
SOX9-AS1-205ENST00000440093 CECR2Q9BXF3 1484 aa10.82□□□□□ -0.68
SOX9-AS1-205ENST00000440093 DNAJC5Q9H3Z4 198 aa10.79□□□□□ -0.68
SOX9-AS1-205ENST00000440093 DCAF8L2P0C7V8 631 aa10.78□□□□□ -0.68
SOX9-AS1-205ENST00000440093 MYO15BQ96JP2 1530 aa10.74□□□□□ -0.69
SOX9-AS1-205ENST00000440093 EIF4G1Q04637 1599 aaKnown RBP10.73□□□□□ -0.69
SOX9-AS1-205ENST00000440093 SHROOM4Q9ULL8 1493 aa10.7□□□□□ -0.7
SOX9-AS1-205ENST00000440093 PPP4R3CPQ6ZMV5 832 aa10.7□□□□□ -0.7
SOX9-AS1-205ENST00000440093 SCRIBQ14160 1630 aa10.65□□□□□ -0.7
SOX9-AS1-205ENST00000440093 ZCCHC6Q5VYS8 1495 aaKnown RBP10.54□□□□□ -0.72
SOX9-AS1-205ENST00000440093 DCAF8L1A6NGE4 600 aa10.51□□□□□ -0.73
SOX9-AS1-205ENST00000440093 DCAF1Q9Y4B6 1507 aa10.49□□□□□ -0.73
SOX9-AS1-205ENST00000440093 HOXD11P31277 338 aaPredicted RBP10.49□□□□□ -0.73
SOX9-AS1-205ENST00000440093 CNKSR2Q8WXI2 1034 aa10.48□□□□□ -0.73
SOX9-AS1-205ENST00000440093 CUX2O14529 1486 aa10.45□□□□□ -0.74
SOX9-AS1-205ENST00000440093 RNF216Q9NWF9 866 aaPredicted RBP10.39□□□□□ -0.75
SOX9-AS1-205ENST00000440093 CACNB1Q02641 598 aaPredicted RBP10.38□□□□□ -0.75
SOX9-AS1-205ENST00000440093 ERCC6Q03468 1493 aa10.35□□□□□ -0.75
SOX9-AS1-205ENST00000440093 RNF39Q9H2S5 420 aa10.28□□□□□ -0.76
SOX9-AS1-205ENST00000440093 THOC2Q8NI27 1593 aaKnown RBP10.26□□□□□ -0.77
SOX9-AS1-205ENST00000440093 NESP48681 1621 aa10.25□□□□□ -0.77
SOX9-AS1-205ENST00000440093 NCBP3Q53F19 620 aaKnown RBP10.22□□□□□ -0.77
SOX9-AS1-205ENST00000440093 TRIM41Q8WV44 630 aa10.2□□□□□ -0.78
SOX9-AS1-205ENST00000440093 NCAPD3P42695 1498 aa10.17□□□□□ -0.78
SOX9-AS1-205ENST00000440093 SMARCA2P51531 1590 aa10.16□□□□□ -0.78
SOX9-AS1-205ENST00000440093 KIF21AQ7Z4S6 1674 aa10.15□□□□□ -0.79
SOX9-AS1-205ENST00000440093 HMGXB3Q12766 1538 aa10.13□□□□□ -0.79
SOX9-AS1-205ENST00000440093 ATAD2BQ9ULI0 1458 aa10.13□□□□□ -0.79
SOX9-AS1-205ENST00000440093 NPM3O75607 178 aaKnown RBP10.13□□□□□ -0.79
SOX9-AS1-205ENST00000440093 C1QBPQ07021 282 aaKnown RBP10.09□□□□□ -0.79
SOX9-AS1-205ENST00000440093 SMARCA4P51532 1647 aa10.08□□□□□ -0.8
SOX9-AS1-205ENST00000440093 LAMC3Q9Y6N6 1575 aa10.05□□□□□ -0.8
SOX9-AS1-205ENST00000440093 BAZ1AQ9NRL2 1556 aaPredicted RBP10.03□□□□□ -0.8
SOX9-AS1-205ENST00000440093 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.01□□□□□ -0.81
SOX9-AS1-205ENST00000440093 BAZ1BQ9UIG0 1483 aaKnown RBP10.01□□□□□ -0.81
SOX9-AS1-205ENST00000440093 WDR62O43379 1518 aa9.97□□□□□ -0.81
SOX9-AS1-205ENST00000440093 PEG3Q9GZU2 1588 aa9.97□□□□□ -0.81
SOX9-AS1-205ENST00000440093 MRC2Q9UBG0 1479 aa9.94□□□□□ -0.82
SOX9-AS1-205ENST00000440093 PDS5BQ9NTI5 1447 aa9.92□□□□□ -0.82
SOX9-AS1-205ENST00000440093 KCNA4P22459 653 aa9.92□□□□□ -0.82
SOX9-AS1-205ENST00000440093 RIMBP3CA6NJZ7 1639 aa9.92□□□□□ -0.82
SOX9-AS1-205ENST00000440093 RIMBP3BA6NNM3 1639 aa9.92□□□□□ -0.82
SOX9-AS1-205ENST00000440093 RIMBP3Q9UFD9 1639 aa9.92□□□□□ -0.82
SOX9-AS1-205ENST00000440093 MROH2BQ7Z745 1585 aa9.88□□□□□ -0.83
SOX9-AS1-205ENST00000440093 CADPSQ9ULU8 1353 aa9.83□□□□□ -0.84
SOX9-AS1-205ENST00000440093 CEP164Q9UPV0 1460 aa9.82□□□□□ -0.84
SOX9-AS1-205ENST00000440093 ARHGEF11O15085 1522 aa9.82□□□□□ -0.84
SOX9-AS1-205ENST00000440093 U3KPZ7 1027 aaPredicted RBP9.81□□□□□ -0.84
SOX9-AS1-205ENST00000440093 OSCARQ8IYS5 282 aa9.78□□□□□ -0.84
SOX9-AS1-205ENST00000440093 FANCD2Q9BXW9 1451 aa9.78□□□□□ -0.84
SOX9-AS1-205ENST00000440093 URB2Q14146 1524 aaKnown RBP9.77□□□□□ -0.84
SOX9-AS1-205ENST00000440093 WIZO95785 1651 aa9.76□□□□□ -0.85
SOX9-AS1-205ENST00000440093 SLC4A2P04920 1241 aa9.72□□□□□ -0.85
SOX9-AS1-205ENST00000440093 SPINK5Q9NQ38 1064 aaPredicted RBP9.72□□□□□ -0.85
SOX9-AS1-205ENST00000440093 ARAP1Q96P48 1450 aa9.72□□□□□ -0.85
SOX9-AS1-205ENST00000440093 ZNF608Q9ULD9 1512 aaPredicted RBP9.72□□□□□ -0.85
SOX9-AS1-205ENST00000440093 CHD1O14646 1710 aa9.7□□□□□ -0.86
SOX9-AS1-205ENST00000440093 EIF4G3O43432 1585 aaKnown RBP9.68□□□□□ -0.86
SOX9-AS1-205ENST00000440093 CFTRP13569 1480 aa9.68□□□□□ -0.86
SOX9-AS1-205ENST00000440093 PRDM2Q13029 1718 aa9.67□□□□□ -0.86
SOX9-AS1-205ENST00000440093 CAPN15O75808 1086 aa9.66□□□□□ -0.86
SOX9-AS1-205ENST00000440093 CYB5RLQ6IPT4 315 aa9.63□□□□□ -0.87
SOX9-AS1-205ENST00000440093 TRHP20396 242 aaPredicted RBP9.62□□□□□ -0.87
SOX9-AS1-205ENST00000440093 DSG3P32926 999 aa9.62□□□□□ -0.87
SOX9-AS1-205ENST00000440093 IFT140Q96RY7 1462 aa9.61□□□□□ -0.87
SOX9-AS1-205ENST00000440093 TOP2AP11388 1531 aaKnown RBP9.57□□□□□ -0.88
SOX9-AS1-205ENST00000440093 TOPBP1Q92547 1522 aa9.57□□□□□ -0.88
SOX9-AS1-205ENST00000440093 TARBP1Q13395 1621 aaKnown RBP9.56□□□□□ -0.88
SOX9-AS1-205ENST00000440093 RSF1Q96T23 1441 aaPredicted RBP9.56□□□□□ -0.88
SOX9-AS1-205ENST00000440093 CLASP1Q7Z460 1538 aa9.54□□□□□ -0.88
SOX9-AS1-205ENST00000440093 AQRO60306 1485 aaKnown RBP eCLIP9.53□□□□□ -0.88
SOX9-AS1-205ENST00000440093 DNMBPQ6XZF7 1577 aa9.51□□□□□ -0.89
SOX9-AS1-205ENST00000440093 ABCB7O75027 752 aa9.47□□□□□ -0.89
SOX9-AS1-205ENST00000440093 POLA1P09884 1462 aaPredicted RBP9.46□□□□□ -0.9
SOX9-AS1-205ENST00000440093 SNAPC4Q5SXM2 1469 aa9.46□□□□□ -0.9
SOX9-AS1-205ENST00000440093 FBLN2P98095 1184 aa9.44□□□□□ -0.9
SOX9-AS1-205ENST00000440093 SYNJ1O43426 1573 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms