RNA–Protein interactions for RNA: ENST00000439260.5

SLC13A1-203, Transcript of solute carrier family 13 member 1, humanhuman

TSL 1 (best)

Gene SLC13A1, Length 2,457 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A1-203ENST00000439260 NISCHQ9Y2I1 1504 aa15.87■□□□□ 0.13
SLC13A1-203ENST00000439260 CCDC180Q9P1Z9 1646 aa14.37□□□□□ -0.11
SLC13A1-203ENST00000439260 SHROOM4Q9ULL8 1493 aa13.7□□□□□ -0.22
SLC13A1-203ENST00000439260 ABCC9O60706 1549 aa13.54□□□□□ -0.24
SLC13A1-203ENST00000439260 PELP1Q8IZL8 1130 aaKnown RBP13.49□□□□□ -0.25
SLC13A1-203ENST00000439260 MYO15BQ96JP2 1530 aa13.48□□□□□ -0.25
SLC13A1-203ENST00000439260 DCAF8L2P0C7V8 631 aa13.44□□□□□ -0.26
SLC13A1-203ENST00000439260 NACADO15069 1562 aa13.41□□□□□ -0.26
SLC13A1-203ENST00000439260 DCAF1Q9Y4B6 1507 aa13.38□□□□□ -0.27
SLC13A1-203ENST00000439260 RB1CC1Q8TDY2 1594 aa13.37□□□□□ -0.27
SLC13A1-203ENST00000439260 SUPT5HO00267 1087 aaKnown RBP13.33□□□□□ -0.28
SLC13A1-203ENST00000439260 ZCCHC6Q5VYS8 1495 aaKnown RBP13.3□□□□□ -0.28
SLC13A1-203ENST00000439260 MYT1Q01538 1121 aa13.24□□□□□ -0.29
SLC13A1-203ENST00000439260 UNC13AQ9UPW8 1703 aa13.05□□□□□ -0.32
SLC13A1-203ENST00000439260 BICRAQ9NZM4 1560 aa12.88□□□□□ -0.35
SLC13A1-203ENST00000439260 HRCP23327 699 aa12.78□□□□□ -0.36
SLC13A1-203ENST00000439260 CHIC1Q5VXU3 224 aa12.77□□□□□ -0.37
SLC13A1-203ENST00000439260 SCRIBQ14160 1630 aa12.75□□□□□ -0.37
SLC13A1-203ENST00000439260 TTBK1Q5TCY1 1321 aaPredicted RBP12.67□□□□□ -0.38
SLC13A1-203ENST00000439260 LOC105371045A0A1W2PR82 267 aa12.55□□□□□ -0.4
SLC13A1-203ENST00000439260 EIF4G1Q04637 1599 aaKnown RBP12.51□□□□□ -0.41
SLC13A1-203ENST00000439260 PABPN1Q86U42 306 aaKnown RBP eCLIP12.5□□□□□ -0.41
SLC13A1-203ENST00000439260 RSF1Q96T23 1441 aaPredicted RBP12.5□□□□□ -0.41
SLC13A1-203ENST00000439260 CECR2Q9BXF3 1484 aa12.47□□□□□ -0.41
SLC13A1-203ENST00000439260 EHMT2Q96KQ7 1210 aa12.45□□□□□ -0.42
SLC13A1-203ENST00000439260 CC2D2AQ9P2K1 1620 aa12.43□□□□□ -0.42
SLC13A1-203ENST00000439260 FAM9AQ8IZU1 332 aaPredicted RBP12.38□□□□□ -0.43
SLC13A1-203ENST00000439260 SCAF1Q9H7N4 1312 aaKnown RBP12.37□□□□□ -0.43
SLC13A1-203ENST00000439260 MROH2BQ7Z745 1585 aa12.36□□□□□ -0.43
SLC13A1-203ENST00000439260 PEG3Q9GZU2 1588 aa12.36□□□□□ -0.43
SLC13A1-203ENST00000439260 PCGF6Q9BYE7 350 aa12.35□□□□□ -0.43
SLC13A1-203ENST00000439260 BAZ1AQ9NRL2 1556 aaPredicted RBP12.35□□□□□ -0.43
SLC13A1-203ENST00000439260 SMARCA4P51532 1647 aa12.34□□□□□ -0.43
SLC13A1-203ENST00000439260 WIZO95785 1651 aa12.32□□□□□ -0.44
SLC13A1-203ENST00000439260 SMARCA2P51531 1590 aa12.32□□□□□ -0.44
SLC13A1-203ENST00000439260 DNAJC5BQ9UF47 199 aa12.3□□□□□ -0.44
SLC13A1-203ENST00000439260 HMGXB3Q12766 1538 aa12.3□□□□□ -0.44
SLC13A1-203ENST00000439260 PPARGC1BQ86YN6 1023 aaKnown RBP12.3□□□□□ -0.44
SLC13A1-203ENST00000439260 NCAPD3P42695 1498 aa12.29□□□□□ -0.44
SLC13A1-203ENST00000439260 TRIM41Q8WV44 630 aa12.28□□□□□ -0.44
SLC13A1-203ENST00000439260 AEBP2Q6ZN18 517 aaPredicted RBP12.26□□□□□ -0.45
SLC13A1-203ENST00000439260 ATAD2BQ9ULI0 1458 aa12.2□□□□□ -0.46
SLC13A1-203ENST00000439260 BAZ1BQ9UIG0 1483 aaKnown RBP12.08□□□□□ -0.48
SLC13A1-203ENST00000439260 PRKCSHP14314 528 aaPredicted RBP12.08□□□□□ -0.48
SLC13A1-203ENST00000439260 ABCC8Q09428 1581 aa12.06□□□□□ -0.48
SLC13A1-203ENST00000439260 BCL11AQ9H165 835 aa12.04□□□□□ -0.48
SLC13A1-203ENST00000439260 LAMC3Q9Y6N6 1575 aa12.02□□□□□ -0.49
SLC13A1-203ENST00000439260 CCDC88BA6NC98 1476 aa12.02□□□□□ -0.49
SLC13A1-203ENST00000439260 TOP2AP11388 1531 aaKnown RBP12.01□□□□□ -0.49
SLC13A1-203ENST00000439260 ERICH6Q7L0X2 663 aa11.99□□□□□ -0.49
SLC13A1-203ENST00000439260 PRDM2Q13029 1718 aa11.98□□□□□ -0.49
SLC13A1-203ENST00000439260 TRIM26Q12899 539 aaPredicted RBP11.95□□□□□ -0.5
SLC13A1-203ENST00000439260 ACIN1Q9UKV3 1341 aaKnown RBP11.95□□□□□ -0.5
SLC13A1-203ENST00000439260 CENPBP07199 599 aaPredicted RBP11.94□□□□□ -0.5
SLC13A1-203ENST00000439260 SOGA1O94964 1423 aa11.9□□□□□ -0.51
SLC13A1-203ENST00000439260 RUSC2Q8N2Y8 1516 aa11.9□□□□□ -0.51
SLC13A1-203ENST00000439260 ZEB1P37275 1124 aaPredicted RBP11.89□□□□□ -0.51
SLC13A1-203ENST00000439260 CUX2O14529 1486 aa11.87□□□□□ -0.51
SLC13A1-203ENST00000439260 APLP2Q06481 763 aa11.85□□□□□ -0.51
SLC13A1-203ENST00000439260 CADPSQ9ULU8 1353 aa11.83□□□□□ -0.52
SLC13A1-203ENST00000439260 PDS5BQ9NTI5 1447 aa11.83□□□□□ -0.52
SLC13A1-203ENST00000439260 CFTRP13569 1480 aa11.81□□□□□ -0.52
SLC13A1-203ENST00000439260 GTF3C3Q9Y5Q9 886 aa11.81□□□□□ -0.52
SLC13A1-203ENST00000439260 THOC2Q8NI27 1593 aaKnown RBP11.8□□□□□ -0.52
SLC13A1-203ENST00000439260 NEUROD1Q13562 356 aa11.8□□□□□ -0.52
SLC13A1-203ENST00000439260 RANGAP1P46060 587 aaPredicted RBP11.79□□□□□ -0.52
SLC13A1-203ENST00000439260 KIF21AQ7Z4S6 1674 aa11.78□□□□□ -0.52
SLC13A1-203ENST00000439260 UBTFP17480 764 aaKnown RBP11.75□□□□□ -0.53
SLC13A1-203ENST00000439260 SYNJ1O43426 1573 aa11.74□□□□□ -0.53
SLC13A1-203ENST00000439260 ERCC6Q03468 1493 aa11.74□□□□□ -0.53
SLC13A1-203ENST00000439260 WDR62O43379 1518 aa11.73□□□□□ -0.53
SLC13A1-203ENST00000439260 WRNQ14191 1432 aaPredicted RBP eCLIP11.72□□□□□ -0.53
SLC13A1-203ENST00000439260 MRC2Q9UBG0 1479 aa11.72□□□□□ -0.53
SLC13A1-203ENST00000439260 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.71□□□□□ -0.53
SLC13A1-203ENST00000439260 NESP48681 1621 aa11.71□□□□□ -0.53
SLC13A1-203ENST00000439260 CSRNP3Q8WYN3 585 aa11.71□□□□□ -0.53
SLC13A1-203ENST00000439260 CEP162Q5TB80 1403 aa11.7□□□□□ -0.54
SLC13A1-203ENST00000439260 CEP164Q9UPV0 1460 aa11.69□□□□□ -0.54
SLC13A1-203ENST00000439260 FANCD2Q9BXW9 1451 aa11.67□□□□□ -0.54
SLC13A1-203ENST00000439260 ANP32EQ9BTT0 268 aa11.66□□□□□ -0.54
SLC13A1-203ENST00000439260 WDR97A6NE52 1622 aa11.64□□□□□ -0.55
SLC13A1-203ENST00000439260 TNIKQ9UKE5 1360 aa11.59□□□□□ -0.55
SLC13A1-203ENST00000439260 DNMBPQ6XZF7 1577 aa11.59□□□□□ -0.55
SLC13A1-203ENST00000439260 RAPGEF2Q9Y4G8 1499 aa11.58□□□□□ -0.56
SLC13A1-203ENST00000439260 GOLGA3Q08378 1498 aa11.56□□□□□ -0.56
SLC13A1-203ENST00000439260 CCER1Q8TC90 406 aaPredicted RBP11.56□□□□□ -0.56
SLC13A1-203ENST00000439260 URB2Q14146 1524 aaKnown RBP11.54□□□□□ -0.56
SLC13A1-203ENST00000439260 IFT140Q96RY7 1462 aa11.52□□□□□ -0.57
SLC13A1-203ENST00000439260 TOPBP1Q92547 1522 aa11.51□□□□□ -0.57
SLC13A1-203ENST00000439260 EEA1Q15075 1411 aa11.5□□□□□ -0.57
SLC13A1-203ENST00000439260 HNRNPUL2Q1KMD3 747 aaKnown RBP11.5□□□□□ -0.57
SLC13A1-203ENST00000439260 CUX1P39880 1505 aa11.5□□□□□ -0.57
SLC13A1-203ENST00000439260 TOP2BQ02880 1626 aa11.49□□□□□ -0.57
SLC13A1-203ENST00000439260 CLIP1P30622 1438 aa11.49□□□□□ -0.57
SLC13A1-203ENST00000439260 BIVM-ERCC5R4GMW8 1640 aa11.49□□□□□ -0.57
SLC13A1-203ENST00000439260 TARBP1Q13395 1621 aaKnown RBP11.46□□□□□ -0.57
SLC13A1-203ENST00000439260 KIF21BO75037 1637 aa11.45□□□□□ -0.58
SLC13A1-203ENST00000439260 SLC24A1O60721 1099 aa11.39□□□□□ -0.59
SLC13A1-203ENST00000439260 KANK4Q5T7N3 995 aaPredicted RBP11.38□□□□□ -0.59
SLC13A1-203ENST00000439260 POLA1P09884 1462 aaPredicted RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms