RNA–Protein interactions for RNA: ENST00000437944.5

SCRN3-206, Transcript of secernin 3, humanhuman

TSL 2

Gene SCRN3, Length 1,141 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN3-206ENST00000437944 AEBP2Q6ZN18 517 aaPredicted RBP29.37■■■□□ 2.29
SCRN3-206ENST00000437944 NISCHQ9Y2I1 1504 aa29.32■■■□□ 2.28
SCRN3-206ENST00000437944 CHIC1Q5VXU3 224 aa28.95■■■□□ 2.22
SCRN3-206ENST00000437944 CCDC180Q9P1Z9 1646 aa25.88■■□□□ 1.73
SCRN3-206ENST00000437944 PHF23Q9BUL5 403 aaPredicted RBP25.57■■□□□ 1.68
SCRN3-206ENST00000437944 ABCC9O60706 1549 aa24.76■■□□□ 1.55
SCRN3-206ENST00000437944 SENP3Q9H4L4 574 aaPredicted RBP24.71■■□□□ 1.55
SCRN3-206ENST00000437944 ZCCHC6Q5VYS8 1495 aaKnown RBP24.53■■□□□ 1.52
SCRN3-206ENST00000437944 DCAF1Q9Y4B6 1507 aa24.31■■□□□ 1.48
SCRN3-206ENST00000437944 MYO15BQ96JP2 1530 aa24.24■■□□□ 1.47
SCRN3-206ENST00000437944 DCAF8L2P0C7V8 631 aa24.21■■□□□ 1.47
SCRN3-206ENST00000437944 NACADO15069 1562 aa24.2■■□□□ 1.46
SCRN3-206ENST00000437944 RB1CC1Q8TDY2 1594 aa24.08■■□□□ 1.45
SCRN3-206ENST00000437944 SCRIBQ14160 1630 aa23.6■■□□□ 1.37
SCRN3-206ENST00000437944 UNC13AQ9UPW8 1703 aa23.59■■□□□ 1.37
SCRN3-206ENST00000437944 PLPPR3Q6T4P5 718 aa23.57■■□□□ 1.36
SCRN3-206ENST00000437944 SHROOM4Q9ULL8 1493 aa23.4■■□□□ 1.34
SCRN3-206ENST00000437944 BICRAQ9NZM4 1560 aa23.35■■□□□ 1.33
SCRN3-206ENST00000437944 PABPN1Q86U42 306 aaKnown RBP eCLIP23.21■■□□□ 1.31
SCRN3-206ENST00000437944 FOXD1Q16676 465 aa22.98■■□□□ 1.27
SCRN3-206ENST00000437944 CECR2Q9BXF3 1484 aa22.76■■□□□ 1.23
SCRN3-206ENST00000437944 BAZ1AQ9NRL2 1556 aaPredicted RBP22.7■■□□□ 1.22
SCRN3-206ENST00000437944 EIF4G1Q04637 1599 aaKnown RBP22.67■■□□□ 1.22
SCRN3-206ENST00000437944 SMARCA4P51532 1647 aa22.65■■□□□ 1.22
SCRN3-206ENST00000437944 MROH2BQ7Z745 1585 aa22.6■■□□□ 1.21
SCRN3-206ENST00000437944 RSF1Q96T23 1441 aaPredicted RBP22.52■■□□□ 1.2
SCRN3-206ENST00000437944 CC2D2AQ9P2K1 1620 aa22.46■■□□□ 1.19
SCRN3-206ENST00000437944 PEG3Q9GZU2 1588 aa22.44■■□□□ 1.18
SCRN3-206ENST00000437944 PPP6R1Q9UPN7 881 aa22.43■■□□□ 1.18
SCRN3-206ENST00000437944 WIZO95785 1651 aa22.39■■□□□ 1.18
SCRN3-206ENST00000437944 SMARCA2P51531 1590 aa22.39■■□□□ 1.18
SCRN3-206ENST00000437944 ATAD2BQ9ULI0 1458 aa22.38■■□□□ 1.17
SCRN3-206ENST00000437944 ADRA2BP18089 450 aa22.35■■□□□ 1.17
SCRN3-206ENST00000437944 NCAPD3P42695 1498 aa22.31■■□□□ 1.16
SCRN3-206ENST00000437944 SUPT5HO00267 1087 aaKnown RBP22.28■■□□□ 1.16
SCRN3-206ENST00000437944 DNAJC5BQ9UF47 199 aa22.26■■□□□ 1.15
SCRN3-206ENST00000437944 HMGXB3Q12766 1538 aa22.25■■□□□ 1.15
SCRN3-206ENST00000437944 BAZ1BQ9UIG0 1483 aaKnown RBP22.22■■□□□ 1.15
SCRN3-206ENST00000437944 TOP2AP11388 1531 aaKnown RBP22.18■■□□□ 1.14
SCRN3-206ENST00000437944 CCDC88BA6NC98 1476 aa21.9■■□□□ 1.1
SCRN3-206ENST00000437944 CADPSQ9ULU8 1353 aa21.67■■□□□ 1.06
SCRN3-206ENST00000437944 CFTRP13569 1480 aa21.65■■□□□ 1.06
SCRN3-206ENST00000437944 LAMC3Q9Y6N6 1575 aa21.65■■□□□ 1.06
SCRN3-206ENST00000437944 PIAS4Q8N2W9 510 aaPredicted RBP21.64■■□□□ 1.05
SCRN3-206ENST00000437944 PRDM2Q13029 1718 aa21.6■■□□□ 1.05
SCRN3-206ENST00000437944 NESP48681 1621 aa21.58■■□□□ 1.05
SCRN3-206ENST00000437944 PDS5BQ9NTI5 1447 aa21.46■■□□□ 1.03
SCRN3-206ENST00000437944 FANCD2Q9BXW9 1451 aa21.41■■□□□ 1.02
SCRN3-206ENST00000437944 KIF21AQ7Z4S6 1674 aa21.39■■□□□ 1.01
SCRN3-206ENST00000437944 CEP164Q9UPV0 1460 aa21.34■■□□□ 1.01
SCRN3-206ENST00000437944 ERCC6Q03468 1493 aa21.3■■□□□ 1
SCRN3-206ENST00000437944 ABCC8Q09428 1581 aa21.25■□□□□ 0.99
SCRN3-206ENST00000437944 WRNQ14191 1432 aaPredicted RBP eCLIP21.21■□□□□ 0.99
SCRN3-206ENST00000437944 MRC2Q9UBG0 1479 aa21.21■□□□□ 0.99
SCRN3-206ENST00000437944 THOC2Q8NI27 1593 aaKnown RBP21.19■□□□□ 0.98
SCRN3-206ENST00000437944 URB2Q14146 1524 aaKnown RBP21.18■□□□□ 0.98
SCRN3-206ENST00000437944 DNMBPQ6XZF7 1577 aa21.18■□□□□ 0.98
SCRN3-206ENST00000437944 CUX1P39880 1505 aa21.17■□□□□ 0.98
SCRN3-206ENST00000437944 BIVM-ERCC5R4GMW8 1640 aa21.15■□□□□ 0.98
SCRN3-206ENST00000437944 TOP2BQ02880 1626 aa21.15■□□□□ 0.98
SCRN3-206ENST00000437944 SYNJ1O43426 1573 aa21.14■□□□□ 0.98
SCRN3-206ENST00000437944 WDR62O43379 1518 aa21.14■□□□□ 0.97
SCRN3-206ENST00000437944 TOPBP1Q92547 1522 aa21.14■□□□□ 0.97
SCRN3-206ENST00000437944 TRIM41Q8WV44 630 aa21.05■□□□□ 0.96
SCRN3-206ENST00000437944 FGD5Q6ZNL6 1462 aa21.01■□□□□ 0.95
SCRN3-206ENST00000437944 POLA1P09884 1462 aaPredicted RBP20.99■□□□□ 0.95
SCRN3-206ENST00000437944 MSH5O43196 834 aa20.95■□□□□ 0.94
SCRN3-206ENST00000437944 CUX2O14529 1486 aa20.93■□□□□ 0.94
SCRN3-206ENST00000437944 SOGA1O94964 1423 aa20.9■□□□□ 0.94
SCRN3-206ENST00000437944 TARBP1Q13395 1621 aaKnown RBP20.89■□□□□ 0.94
SCRN3-206ENST00000437944 IFT140Q96RY7 1462 aa20.88■□□□□ 0.93
SCRN3-206ENST00000437944 RAD54L2Q9Y4B4 1467 aa20.88■□□□□ 0.93
SCRN3-206ENST00000437944 WDR97A6NE52 1622 aa20.86■□□□□ 0.93
SCRN3-206ENST00000437944 ABCA10Q8WWZ4 1543 aa20.84■□□□□ 0.93
SCRN3-206ENST00000437944 PPP4R3CPQ6ZMV5 832 aa20.84■□□□□ 0.93
SCRN3-206ENST00000437944 KCNA4P22459 653 aa20.78■□□□□ 0.92
SCRN3-206ENST00000437944 KIF27Q86VH2 1401 aa20.74■□□□□ 0.91
SCRN3-206ENST00000437944 ABCA5Q8WWZ7 1642 aa20.73■□□□□ 0.91
SCRN3-206ENST00000437944 ZNF608Q9ULD9 1512 aaPredicted RBP20.73■□□□□ 0.91
SCRN3-206ENST00000437944 TDRD9Q8NDG6 1382 aaKnown RBP20.71■□□□□ 0.91
SCRN3-206ENST00000437944 EEA1Q15075 1411 aa20.7■□□□□ 0.9
SCRN3-206ENST00000437944 RUSC2Q8N2Y8 1516 aa20.69■□□□□ 0.9
SCRN3-206ENST00000437944 EIF4G3O43432 1585 aaKnown RBP20.69■□□□□ 0.9
SCRN3-206ENST00000437944 GAPVD1Q14C86 1478 aa20.69■□□□□ 0.9
SCRN3-206ENST00000437944 AQRO60306 1485 aaKnown RBP eCLIP20.67■□□□□ 0.9
SCRN3-206ENST00000437944 PBRM1Q86U86 1689 aa20.64■□□□□ 0.9
SCRN3-206ENST00000437944 ERICH3Q5RHP9 1530 aa20.61■□□□□ 0.89
SCRN3-206ENST00000437944 GRIN2BQ13224 1484 aa20.61■□□□□ 0.89
SCRN3-206ENST00000437944 IGF1RP08069 1367 aa20.59■□□□□ 0.89
SCRN3-206ENST00000437944 FAM9AQ8IZU1 332 aaPredicted RBP20.57■□□□□ 0.88
SCRN3-206ENST00000437944 CSRNP3Q8WYN3 585 aa20.57■□□□□ 0.88
SCRN3-206ENST00000437944 CUL7Q14999 1698 aa20.54■□□□□ 0.88
SCRN3-206ENST00000437944 MAGI1Q96QZ7 1491 aaPredicted RBP20.51■□□□□ 0.87
SCRN3-206ENST00000437944 SNAPC4Q5SXM2 1469 aa20.5■□□□□ 0.87
SCRN3-206ENST00000437944 ADAMTS12P58397 1594 aa20.49■□□□□ 0.87
SCRN3-206ENST00000437944 PRXQ9BXM0 1461 aa20.48■□□□□ 0.87
SCRN3-206ENST00000437944 CARMIL1Q5VZK9 1371 aa20.47■□□□□ 0.87
SCRN3-206ENST00000437944 FHAD1B1AJZ9 1412 aa20.46■□□□□ 0.87
SCRN3-206ENST00000437944 KIF21BO75037 1637 aa20.45■□□□□ 0.87
SCRN3-206ENST00000437944 DNAJC5Q9H3Z4 198 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms