RNA–Protein interactions for RNA: ENST00000437904.1

ATP13A4-206, Transcript of ATPase 13A4, humanhuman

TSL 4

Gene ATP13A4, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A4-206ENST00000437904 AEBP2Q6ZN18 517 aaPredicted RBP16.26■□□□□ 0.19
ATP13A4-206ENST00000437904 CHIC1Q5VXU3 224 aa15.28■□□□□ 0.04
ATP13A4-206ENST00000437904 SENP3Q9H4L4 574 aaPredicted RBP14.05□□□□□ -0.16
ATP13A4-206ENST00000437904 PHF23Q9BUL5 403 aaPredicted RBP13.77□□□□□ -0.21
ATP13A4-206ENST00000437904 NISCHQ9Y2I1 1504 aa13.58□□□□□ -0.24
ATP13A4-206ENST00000437904 POTEDQ86YR6 584 aa13.3□□□□□ -0.28
ATP13A4-206ENST00000437904 FOXD1Q16676 465 aa13.13□□□□□ -0.31
ATP13A4-206ENST00000437904 MSH5O43196 834 aa12.59□□□□□ -0.39
ATP13A4-206ENST00000437904 PIAS4Q8N2W9 510 aaPredicted RBP12.13□□□□□ -0.47
ATP13A4-206ENST00000437904 CCDC180Q9P1Z9 1646 aa11.89□□□□□ -0.51
ATP13A4-206ENST00000437904 PPP6R1Q9UPN7 881 aa11.77□□□□□ -0.53
ATP13A4-206ENST00000437904 ABCC9O60706 1549 aa11.75□□□□□ -0.53
ATP13A4-206ENST00000437904 ADRA2BP18089 450 aa11.7□□□□□ -0.54
ATP13A4-206ENST00000437904 PLPPR3Q6T4P5 718 aa11.64□□□□□ -0.55
ATP13A4-206ENST00000437904 ZCCHC6Q5VYS8 1495 aaKnown RBP11.44□□□□□ -0.58
ATP13A4-206ENST00000437904 RB1CC1Q8TDY2 1594 aa11.22□□□□□ -0.61
ATP13A4-206ENST00000437904 DCAF1Q9Y4B6 1507 aa11.2□□□□□ -0.62
ATP13A4-206ENST00000437904 CACNB1Q02641 598 aaPredicted RBP11.19□□□□□ -0.62
ATP13A4-206ENST00000437904 NACADO15069 1562 aa11.17□□□□□ -0.62
ATP13A4-206ENST00000437904 SHROOM4Q9ULL8 1493 aa11.14□□□□□ -0.63
ATP13A4-206ENST00000437904 DCAF8L2P0C7V8 631 aa11.1□□□□□ -0.63
ATP13A4-206ENST00000437904 MYO15BQ96JP2 1530 aa11.08□□□□□ -0.64
ATP13A4-206ENST00000437904 DNAJC5BQ9UF47 199 aa11.04□□□□□ -0.64
ATP13A4-206ENST00000437904 DMRT2Q9Y5R5 561 aa11.02□□□□□ -0.65
ATP13A4-206ENST00000437904 SCRIBQ14160 1630 aa10.97□□□□□ -0.65
ATP13A4-206ENST00000437904 PABPN1Q86U42 306 aaKnown RBP eCLIP10.95□□□□□ -0.66
ATP13A4-206ENST00000437904 MAPK8IP2Q13387 824 aaPredicted RBP10.94□□□□□ -0.66
ATP13A4-206ENST00000437904 UNC13AQ9UPW8 1703 aa10.92□□□□□ -0.66
ATP13A4-206ENST00000437904 BICRAQ9NZM4 1560 aa10.9□□□□□ -0.67
ATP13A4-206ENST00000437904 SCAF1Q9H7N4 1312 aaKnown RBP10.84□□□□□ -0.67
ATP13A4-206ENST00000437904 SUPT5HO00267 1087 aaKnown RBP10.67□□□□□ -0.7
ATP13A4-206ENST00000437904 RNF39Q9H2S5 420 aa10.65□□□□□ -0.7
ATP13A4-206ENST00000437904 DCAF8L1A6NGE4 600 aa10.63□□□□□ -0.71
ATP13A4-206ENST00000437904 CC2D2AQ9P2K1 1620 aa10.62□□□□□ -0.71
ATP13A4-206ENST00000437904 EIF4G1Q04637 1599 aaKnown RBP10.62□□□□□ -0.71
ATP13A4-206ENST00000437904 CECR2Q9BXF3 1484 aa10.61□□□□□ -0.71
ATP13A4-206ENST00000437904 RSF1Q96T23 1441 aaPredicted RBP10.54□□□□□ -0.72
ATP13A4-206ENST00000437904 MROH2BQ7Z745 1585 aa10.52□□□□□ -0.72
ATP13A4-206ENST00000437904 C1QBPQ07021 282 aaKnown RBP10.5□□□□□ -0.73
ATP13A4-206ENST00000437904 BAZ1AQ9NRL2 1556 aaPredicted RBP10.48□□□□□ -0.73
ATP13A4-206ENST00000437904 SMARCA4P51532 1647 aa10.48□□□□□ -0.73
ATP13A4-206ENST00000437904 WIZO95785 1651 aa10.47□□□□□ -0.73
ATP13A4-206ENST00000437904 HOXD11P31277 338 aaPredicted RBP10.37□□□□□ -0.75
ATP13A4-206ENST00000437904 TOP2AP11388 1531 aaKnown RBP10.34□□□□□ -0.75
ATP13A4-206ENST00000437904 NCAPD3P42695 1498 aa10.34□□□□□ -0.75
ATP13A4-206ENST00000437904 POTEHQ6S545 545 aa10.32□□□□□ -0.76
ATP13A4-206ENST00000437904 PEG3Q9GZU2 1588 aa10.31□□□□□ -0.76
ATP13A4-206ENST00000437904 ATAD2BQ9ULI0 1458 aa10.29□□□□□ -0.76
ATP13A4-206ENST00000437904 SMARCA2P51531 1590 aa10.26□□□□□ -0.77
ATP13A4-206ENST00000437904 HMGXB3Q12766 1538 aa10.23□□□□□ -0.77
ATP13A4-206ENST00000437904 CCDC88BA6NC98 1476 aa10.19□□□□□ -0.78
ATP13A4-206ENST00000437904 BAZ1BQ9UIG0 1483 aaKnown RBP10.19□□□□□ -0.78
ATP13A4-206ENST00000437904 CUX2O14529 1486 aa10.16□□□□□ -0.78
ATP13A4-206ENST00000437904 DNAJC5Q9H3Z4 198 aa10.14□□□□□ -0.79
ATP13A4-206ENST00000437904 RNF216Q9NWF9 866 aaPredicted RBP10.14□□□□□ -0.79
ATP13A4-206ENST00000437904 ERCC6Q03468 1493 aa10.13□□□□□ -0.79
ATP13A4-206ENST00000437904 NESP48681 1621 aa10.11□□□□□ -0.79
ATP13A4-206ENST00000437904 PPP4R3CPQ6ZMV5 832 aa10.1□□□□□ -0.79
ATP13A4-206ENST00000437904 ABCC8Q09428 1581 aa10.07□□□□□ -0.8
ATP13A4-206ENST00000437904 CNKSR2Q8WXI2 1034 aa10.07□□□□□ -0.8
ATP13A4-206ENST00000437904 LAMC3Q9Y6N6 1575 aa10.06□□□□□ -0.8
ATP13A4-206ENST00000437904 PDS5BQ9NTI5 1447 aa10.02□□□□□ -0.81
ATP13A4-206ENST00000437904 CADPSQ9ULU8 1353 aa10.01□□□□□ -0.81
ATP13A4-206ENST00000437904 PRDM2Q13029 1718 aa10.01□□□□□ -0.81
ATP13A4-206ENST00000437904 THOC2Q8NI27 1593 aaKnown RBP10□□□□□ -0.81
ATP13A4-206ENST00000437904 TRIM41Q8WV44 630 aa9.98□□□□□ -0.81
ATP13A4-206ENST00000437904 SYNJ1O43426 1573 aa9.97□□□□□ -0.81
ATP13A4-206ENST00000437904 KIF21AQ7Z4S6 1674 aa9.95□□□□□ -0.82
ATP13A4-206ENST00000437904 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.92□□□□□ -0.82
ATP13A4-206ENST00000437904 WRNQ14191 1432 aaPredicted RBP eCLIP9.91□□□□□ -0.82
ATP13A4-206ENST00000437904 CFTRP13569 1480 aa9.91□□□□□ -0.82
ATP13A4-206ENST00000437904 MRC2Q9UBG0 1479 aa9.91□□□□□ -0.82
ATP13A4-206ENST00000437904 BIVM-ERCC5R4GMW8 1640 aa9.9□□□□□ -0.82
ATP13A4-206ENST00000437904 WDR62O43379 1518 aa9.89□□□□□ -0.83
ATP13A4-206ENST00000437904 TOP2BQ02880 1626 aa9.88□□□□□ -0.83
ATP13A4-206ENST00000437904 FANCD2Q9BXW9 1451 aa9.87□□□□□ -0.83
ATP13A4-206ENST00000437904 FAM9AQ8IZU1 332 aaPredicted RBP9.87□□□□□ -0.83
ATP13A4-206ENST00000437904 CEP164Q9UPV0 1460 aa9.86□□□□□ -0.83
ATP13A4-206ENST00000437904 LOC105371045A0A1W2PR82 267 aa9.85□□□□□ -0.83
ATP13A4-206ENST00000437904 CUX1P39880 1505 aa9.85□□□□□ -0.83
ATP13A4-206ENST00000437904 SOGA1O94964 1423 aa9.82□□□□□ -0.84
ATP13A4-206ENST00000437904 RUSC2Q8N2Y8 1516 aa9.81□□□□□ -0.84
ATP13A4-206ENST00000437904 URB2Q14146 1524 aaKnown RBP9.78□□□□□ -0.84
ATP13A4-206ENST00000437904 EEA1Q15075 1411 aa9.77□□□□□ -0.85
ATP13A4-206ENST00000437904 EHMT2Q96KQ7 1210 aa9.76□□□□□ -0.85
ATP13A4-206ENST00000437904 DSG3P32926 999 aa9.75□□□□□ -0.85
ATP13A4-206ENST00000437904 DNMBPQ6XZF7 1577 aa9.74□□□□□ -0.85
ATP13A4-206ENST00000437904 KIF21BO75037 1637 aa9.73□□□□□ -0.85
ATP13A4-206ENST00000437904 FGD5Q6ZNL6 1462 aa9.72□□□□□ -0.85
ATP13A4-206ENST00000437904 OSCARQ8IYS5 282 aa9.71□□□□□ -0.86
ATP13A4-206ENST00000437904 CAPN15O75808 1086 aa9.69□□□□□ -0.86
ATP13A4-206ENST00000437904 GOLGA3Q08378 1498 aa9.69□□□□□ -0.86
ATP13A4-206ENST00000437904 TOPBP1Q92547 1522 aa9.69□□□□□ -0.86
ATP13A4-206ENST00000437904 IFT140Q96RY7 1462 aa9.69□□□□□ -0.86
ATP13A4-206ENST00000437904 WDR97A6NE52 1622 aa9.68□□□□□ -0.86
ATP13A4-206ENST00000437904 CSRNP3Q8WYN3 585 aa9.66□□□□□ -0.86
ATP13A4-206ENST00000437904 ZNF608Q9ULD9 1512 aaPredicted RBP9.65□□□□□ -0.86
ATP13A4-206ENST00000437904 POLA1P09884 1462 aaPredicted RBP9.65□□□□□ -0.87
ATP13A4-206ENST00000437904 RAPGEF2Q9Y4G8 1499 aa9.65□□□□□ -0.87
ATP13A4-206ENST00000437904 KIF27Q86VH2 1401 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms