RNA–Protein interactions for RNA: ENST00000432518.6

RBMS3-204, Transcript of RNA binding motif single stranded interacting protein 3, humanhuman

TSL 5

Gene RBMS3, Length 2,144 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBMS3-204ENST00000432518 NISCHQ9Y2I1 1504 aa31.66■■■□□ 2.66
RBMS3-204ENST00000432518 CCDC180Q9P1Z9 1646 aa27.74■■■□□ 2.03
RBMS3-204ENST00000432518 ZCCHC6Q5VYS8 1495 aaKnown RBP26.55■■□□□ 1.84
RBMS3-204ENST00000432518 ABCC9O60706 1549 aa26.35■■□□□ 1.81
RBMS3-204ENST00000432518 DCAF1Q9Y4B6 1507 aa26.23■■□□□ 1.79
RBMS3-204ENST00000432518 DCAF8L2P0C7V8 631 aa26.2■■□□□ 1.78
RBMS3-204ENST00000432518 MYO15BQ96JP2 1530 aa26.03■■□□□ 1.76
RBMS3-204ENST00000432518 SHROOM4Q9ULL8 1493 aa25.94■■□□□ 1.74
RBMS3-204ENST00000432518 NACADO15069 1562 aa25.9■■□□□ 1.74
RBMS3-204ENST00000432518 RB1CC1Q8TDY2 1594 aa25.72■■□□□ 1.71
RBMS3-204ENST00000432518 SUPT5HO00267 1087 aaKnown RBP25.58■■□□□ 1.69
RBMS3-204ENST00000432518 SCRIBQ14160 1630 aa25.41■■□□□ 1.66
RBMS3-204ENST00000432518 UNC13AQ9UPW8 1703 aa25.09■■□□□ 1.61
RBMS3-204ENST00000432518 CHIC1Q5VXU3 224 aa25.08■■□□□ 1.61
RBMS3-204ENST00000432518 BICRAQ9NZM4 1560 aa24.87■■□□□ 1.57
RBMS3-204ENST00000432518 PABPN1Q86U42 306 aaKnown RBP eCLIP24.79■■□□□ 1.56
RBMS3-204ENST00000432518 HRCP23327 699 aa24.7■■□□□ 1.54
RBMS3-204ENST00000432518 CECR2Q9BXF3 1484 aa24.57■■□□□ 1.52
RBMS3-204ENST00000432518 BAZ1AQ9NRL2 1556 aaPredicted RBP24.49■■□□□ 1.51
RBMS3-204ENST00000432518 RSF1Q96T23 1441 aaPredicted RBP24.47■■□□□ 1.51
RBMS3-204ENST00000432518 PCGF6Q9BYE7 350 aa24.44■■□□□ 1.5
RBMS3-204ENST00000432518 MROH2BQ7Z745 1585 aa24.42■■□□□ 1.5
RBMS3-204ENST00000432518 SMARCA4P51532 1647 aa24.37■■□□□ 1.49
RBMS3-204ENST00000432518 LOC105371045A0A1W2PR82 267 aa24.23■■□□□ 1.47
RBMS3-204ENST00000432518 WIZO95785 1651 aa24.19■■□□□ 1.46
RBMS3-204ENST00000432518 EIF4G1Q04637 1599 aaKnown RBP24.17■■□□□ 1.46
RBMS3-204ENST00000432518 PEG3Q9GZU2 1588 aa24.12■■□□□ 1.45
RBMS3-204ENST00000432518 TRIM26Q12899 539 aaPredicted RBP24.06■■□□□ 1.44
RBMS3-204ENST00000432518 SMARCA2P51531 1590 aa24.06■■□□□ 1.44
RBMS3-204ENST00000432518 ATAD2BQ9ULI0 1458 aa24.03■■□□□ 1.44
RBMS3-204ENST00000432518 TOP2AP11388 1531 aaKnown RBP23.99■■□□□ 1.43
RBMS3-204ENST00000432518 PPARGC1BQ86YN6 1023 aaKnown RBP23.96■■□□□ 1.43
RBMS3-204ENST00000432518 BAZ1BQ9UIG0 1483 aaKnown RBP23.9■■□□□ 1.42
RBMS3-204ENST00000432518 TRIM41Q8WV44 630 aa23.9■■□□□ 1.42
RBMS3-204ENST00000432518 NCAPD3P42695 1498 aa23.89■■□□□ 1.41
RBMS3-204ENST00000432518 CC2D2AQ9P2K1 1620 aa23.85■■□□□ 1.41
RBMS3-204ENST00000432518 HMGXB3Q12766 1538 aa23.84■■□□□ 1.41
RBMS3-204ENST00000432518 CCDC88BA6NC98 1476 aa23.72■■□□□ 1.39
RBMS3-204ENST00000432518 ZEB1P37275 1124 aaPredicted RBP23.72■■□□□ 1.39
RBMS3-204ENST00000432518 FAM9AQ8IZU1 332 aaPredicted RBP23.57■■□□□ 1.36
RBMS3-204ENST00000432518 DNAJC5BQ9UF47 199 aa23.37■■□□□ 1.33
RBMS3-204ENST00000432518 CFTRP13569 1480 aa23.29■■□□□ 1.32
RBMS3-204ENST00000432518 CADPSQ9ULU8 1353 aa23.27■■□□□ 1.32
RBMS3-204ENST00000432518 EHMT2Q96KQ7 1210 aa23.25■■□□□ 1.31
RBMS3-204ENST00000432518 PRDM2Q13029 1718 aa23.15■■□□□ 1.3
RBMS3-204ENST00000432518 LAMC3Q9Y6N6 1575 aa23.12■■□□□ 1.29
RBMS3-204ENST00000432518 ABCC8Q09428 1581 aa23.12■■□□□ 1.29
RBMS3-204ENST00000432518 WRNQ14191 1432 aaPredicted RBP eCLIP23.09■■□□□ 1.29
RBMS3-204ENST00000432518 NESP48681 1621 aa23.04■■□□□ 1.28
RBMS3-204ENST00000432518 EEA1Q15075 1411 aa23.02■■□□□ 1.28
RBMS3-204ENST00000432518 FANCD2Q9BXW9 1451 aa22.99■■□□□ 1.27
RBMS3-204ENST00000432518 TNIKQ9UKE5 1360 aa22.97■■□□□ 1.27
RBMS3-204ENST00000432518 PDS5BQ9NTI5 1447 aa22.97■■□□□ 1.27
RBMS3-204ENST00000432518 CEP162Q5TB80 1403 aa22.96■■□□□ 1.27
RBMS3-204ENST00000432518 CCER1Q8TC90 406 aaPredicted RBP22.94■■□□□ 1.26
RBMS3-204ENST00000432518 SYNJ1O43426 1573 aa22.92■■□□□ 1.26
RBMS3-204ENST00000432518 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.91■■□□□ 1.26
RBMS3-204ENST00000432518 SOGA1O94964 1423 aa22.91■■□□□ 1.26
RBMS3-204ENST00000432518 TOP2BQ02880 1626 aa22.89■■□□□ 1.26
RBMS3-204ENST00000432518 CEP164Q9UPV0 1460 aa22.88■■□□□ 1.25
RBMS3-204ENST00000432518 BIVM-ERCC5R4GMW8 1640 aa22.87■■□□□ 1.25
RBMS3-204ENST00000432518 CSRNP3Q8WYN3 585 aa22.86■■□□□ 1.25
RBMS3-204ENST00000432518 CUX1P39880 1505 aa22.85■■□□□ 1.25
RBMS3-204ENST00000432518 PELP1Q8IZL8 1130 aaKnown RBP22.81■■□□□ 1.24
RBMS3-204ENST00000432518 SCAF1Q9H7N4 1312 aaKnown RBP22.8■■□□□ 1.24
RBMS3-204ENST00000432518 GOLGA3Q08378 1498 aa22.79■■□□□ 1.24
RBMS3-204ENST00000432518 KIF21AQ7Z4S6 1674 aa22.77■■□□□ 1.24
RBMS3-204ENST00000432518 DNMBPQ6XZF7 1577 aa22.75■■□□□ 1.23
RBMS3-204ENST00000432518 RUSC2Q8N2Y8 1516 aa22.75■■□□□ 1.23
RBMS3-204ENST00000432518 UBTFP17480 764 aaKnown RBP22.72■■□□□ 1.23
RBMS3-204ENST00000432518 TOPBP1Q92547 1522 aa22.71■■□□□ 1.23
RBMS3-204ENST00000432518 URB2Q14146 1524 aaKnown RBP22.68■■□□□ 1.22
RBMS3-204ENST00000432518 ERCC6Q03468 1493 aa22.67■■□□□ 1.22
RBMS3-204ENST00000432518 FGD5Q6ZNL6 1462 aa22.65■■□□□ 1.22
RBMS3-204ENST00000432518 MRC2Q9UBG0 1479 aa22.65■■□□□ 1.22
RBMS3-204ENST00000432518 KIF21BO75037 1637 aa22.65■■□□□ 1.22
RBMS3-204ENST00000432518 DIEXFQ68CQ4 756 aaKnown RBP22.63■■□□□ 1.21
RBMS3-204ENST00000432518 ACIN1Q9UKV3 1341 aaKnown RBP22.6■■□□□ 1.21
RBMS3-204ENST00000432518 TTBK1Q5TCY1 1321 aaPredicted RBP22.59■■□□□ 1.21
RBMS3-204ENST00000432518 POLA1P09884 1462 aaPredicted RBP22.58■■□□□ 1.2
RBMS3-204ENST00000432518 KIF27Q86VH2 1401 aa22.53■■□□□ 1.2
RBMS3-204ENST00000432518 WDR62O43379 1518 aa22.52■■□□□ 1.2
RBMS3-204ENST00000432518 CENPBP07199 599 aaPredicted RBP22.5■■□□□ 1.19
RBMS3-204ENST00000432518 CLIP1P30622 1438 aa22.5■■□□□ 1.19
RBMS3-204ENST00000432518 ABCA10Q8WWZ4 1543 aa22.48■■□□□ 1.19
RBMS3-204ENST00000432518 CUX2O14529 1486 aa22.48■■□□□ 1.19
RBMS3-204ENST00000432518 NEUROD1Q13562 356 aa22.48■■□□□ 1.19
RBMS3-204ENST00000432518 THOC2Q8NI27 1593 aaKnown RBP22.47■■□□□ 1.19
RBMS3-204ENST00000432518 RAD54L2Q9Y4B4 1467 aa22.47■■□□□ 1.19
RBMS3-204ENST00000432518 VPS8Q8N3P4 1428 aa22.47■■□□□ 1.19
RBMS3-204ENST00000432518 ZNF316A6NFI3 1004 aaPredicted RBP22.44■■□□□ 1.18
RBMS3-204ENST00000432518 WDR97A6NE52 1622 aa22.37■■□□□ 1.17
RBMS3-204ENST00000432518 RAPGEF2Q9Y4G8 1499 aa22.37■■□□□ 1.17
RBMS3-204ENST00000432518 TARBP1Q13395 1621 aaKnown RBP22.37■■□□□ 1.17
RBMS3-204ENST00000432518 IFT140Q96RY7 1462 aa22.36■■□□□ 1.17
RBMS3-204ENST00000432518 APLP2Q06481 763 aa22.33■■□□□ 1.16
RBMS3-204ENST00000432518 IGF1RP08069 1367 aa22.32■■□□□ 1.16
RBMS3-204ENST00000432518 PRXQ9BXM0 1461 aa22.29■■□□□ 1.16
RBMS3-204ENST00000432518 TDRD9Q8NDG6 1382 aaKnown RBP22.29■■□□□ 1.16
RBMS3-204ENST00000432518 HNRNPUL2Q1KMD3 747 aaKnown RBP22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms